RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 AGO2Q9UKV8 859 aaKnown RBP12.73□□□□□ -0.37
PCNX4-204ENST00000406949 ZNF536O15090 1300 aa12.73□□□□□ -0.37
PCNX4-204ENST00000406949 NOP56O00567 594 aaKnown RBP12.73□□□□□ -0.37
PCNX4-204ENST00000406949 PEX10O60683 326 aa12.73□□□□□ -0.37
PCNX4-204ENST00000406949 HSPA6P17066 643 aa12.73□□□□□ -0.37
PCNX4-204ENST00000406949 MYH11P35749 1972 aa12.73□□□□□ -0.37
PCNX4-204ENST00000406949 CORO7P57737 925 aa12.73□□□□□ -0.37
PCNX4-204ENST00000406949 ACTR2P61160 394 aa12.73□□□□□ -0.37
PCNX4-204ENST00000406949 TRPC3Q13507 836 aa12.73□□□□□ -0.37
PCNX4-204ENST00000406949 DHX34Q14147 1143 aaKnown RBP12.73□□□□□ -0.37
PCNX4-204ENST00000406949 CYP4F22Q6NT55 531 aa12.73□□□□□ -0.37
PCNX4-204ENST00000406949 SLC9A9Q8IVB4 645 aa12.73□□□□□ -0.37
PCNX4-204ENST00000406949 PLEKHO2Q8TD55 490 aa12.73□□□□□ -0.37
PCNX4-204ENST00000406949 ATP8B4Q8TF62 1192 aa12.73□□□□□ -0.37
PCNX4-204ENST00000406949 RNF25Q96BH1 459 aaPredicted RBP12.73□□□□□ -0.37
PCNX4-204ENST00000406949 RBAKQ9NYW8 714 aaPredicted RBP12.73□□□□□ -0.37
PCNX4-204ENST00000406949 ADAM22Q9P0K1 906 aa12.73□□□□□ -0.37
PCNX4-204ENST00000406949 THSD7AQ9UPZ6 1657 aa12.73□□□□□ -0.37
PCNX4-204ENST00000406949 SLX4Q8IY92 1834 aa12.73□□□□□ -0.37
PCNX4-204ENST00000406949 FAM187AA6NFU0 413 aa12.72□□□□□ -0.37
PCNX4-204ENST00000406949 PHF20L1A8MW92 1017 aa12.72□□□□□ -0.37
PCNX4-204ENST00000406949 DHX15O43143 795 aaKnown RBP12.72□□□□□ -0.37
PCNX4-204ENST00000406949 CAND2O75155 1236 aa12.72□□□□□ -0.37
PCNX4-204ENST00000406949 DGAT1O75907 488 aa12.72□□□□□ -0.37
PCNX4-204ENST00000406949 DCAF12L1Q5VU92 463 aa12.72□□□□□ -0.37
PCNX4-204ENST00000406949 GADL1Q6ZQY3 521 aa12.72□□□□□ -0.37
PCNX4-204ENST00000406949 TMEM161BQ8NDZ6 487 aa12.72□□□□□ -0.37
PCNX4-204ENST00000406949 BSNDQ8WZ55 320 aa12.72□□□□□ -0.37
PCNX4-204ENST00000406949 TARS2Q9BW92 718 aaKnown RBP12.72□□□□□ -0.37
PCNX4-204ENST00000406949 ANKEF1Q9NU02 776 aa12.72□□□□□ -0.37
PCNX4-204ENST00000406949 INTS9Q9NV88 658 aaKnown RBP12.72□□□□□ -0.37
PCNX4-204ENST00000406949 CD2APQ9Y5K6 639 aa12.72□□□□□ -0.37
PCNX4-204ENST00000406949 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.72□□□□□ -0.37
PCNX4-204ENST00000406949 ZNF831Q5JPB2 1677 aa12.72□□□□□ -0.37
PCNX4-204ENST00000406949 NCANO14594 1321 aa12.72□□□□□ -0.37
PCNX4-204ENST00000406949 TCRBV7S2A1N4TA0A589 114 aa12.72□□□□□ -0.37
PCNX4-204ENST00000406949 RASGRF2O14827 1237 aa12.72□□□□□ -0.37
PCNX4-204ENST00000406949 P4HA2O15460 535 aa12.72□□□□□ -0.37
PCNX4-204ENST00000406949 DDX3YO15523 660 aaKnown RBP12.72□□□□□ -0.37
PCNX4-204ENST00000406949 HLA-DRAP01903 254 aa12.72□□□□□ -0.37
PCNX4-204ENST00000406949 ATF2P15336 505 aa12.72□□□□□ -0.37
PCNX4-204ENST00000406949 TFAMQ00059 246 aaKnown RBP12.72□□□□□ -0.37
PCNX4-204ENST00000406949 GTF2BQ00403 316 aa12.72□□□□□ -0.37
PCNX4-204ENST00000406949 HP1BP3Q5SSJ5 553 aaPredicted RBP12.72□□□□□ -0.37
PCNX4-204ENST00000406949 GMNCA6NCL1 334 aa12.72□□□□□ -0.37
PCNX4-204ENST00000406949 DCDC2CA8MYV0 355 aa12.72□□□□□ -0.37
PCNX4-204ENST00000406949 PI4K2BG5E9Z4 385 aa12.72□□□□□ -0.37
PCNX4-204ENST00000406949 PODXLO00592 558 aa12.72□□□□□ -0.37
PCNX4-204ENST00000406949 RRM1P23921 792 aa12.72□□□□□ -0.37
PCNX4-204ENST00000406949 CDR2Q01850 454 aa12.72□□□□□ -0.37
PCNX4-204ENST00000406949 KRT17Q04695 432 aa12.72□□□□□ -0.37
PCNX4-204ENST00000406949 UAP1Q16222 522 aaPredicted RBP12.72□□□□□ -0.37
PCNX4-204ENST00000406949 GKAP1Q5VSY0 366 aaPredicted RBP12.72□□□□□ -0.37
PCNX4-204ENST00000406949 FBXW10Q5XX13 1052 aa12.72□□□□□ -0.37
PCNX4-204ENST00000406949 LRIG3Q6UXM1 1119 aa12.72□□□□□ -0.37
PCNX4-204ENST00000406949 SLC13A5Q86YT5 568 aaPredicted RBP12.72□□□□□ -0.37
PCNX4-204ENST00000406949 CCDC60Q8IWA6 550 aaPredicted RBP12.72□□□□□ -0.37
PCNX4-204ENST00000406949 ZBTB45Q96K62 511 aaPredicted RBP12.72□□□□□ -0.37
PCNX4-204ENST00000406949 SEMA4AQ9H3S1 761 aa12.72□□□□□ -0.37
PCNX4-204ENST00000406949 ACAD9Q9H845 621 aa12.72□□□□□ -0.37
PCNX4-204ENST00000406949 SCN9AQ15858 1988 aa12.71□□□□□ -0.37
PCNX4-204ENST00000406949 SHBGP04278 402 aa12.71□□□□□ -0.37
PCNX4-204ENST00000406949 BACE1P56817 501 aa12.71□□□□□ -0.37
PCNX4-204ENST00000406949 CYP24A1Q07973 514 aa12.71□□□□□ -0.37
PCNX4-204ENST00000406949 EMC2Q15006 297 aa12.71□□□□□ -0.37
PCNX4-204ENST00000406949 LRRC14Q15048 493 aa12.71□□□□□ -0.37
PCNX4-204ENST00000406949 SLFN11Q7Z7L1 901 aa12.71□□□□□ -0.37
PCNX4-204ENST00000406949 MYCBPAPQ8TBZ2 947 aa12.71□□□□□ -0.37
PCNX4-204ENST00000406949 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.71□□□□□ -0.37
PCNX4-204ENST00000406949 CDHR1Q96JP9 859 aa12.71□□□□□ -0.37
PCNX4-204ENST00000406949 TEX13BQ9BXU2 312 aa12.71□□□□□ -0.37
PCNX4-204ENST00000406949 TRIM7Q9C029 511 aa12.71□□□□□ -0.37
PCNX4-204ENST00000406949 ZNF302Q9NR11 478 aa12.71□□□□□ -0.37
PCNX4-204ENST00000406949 CYP26B1Q9NR63 512 aa12.71□□□□□ -0.37
PCNX4-204ENST00000406949 SAMD15Q9P1V8 674 aa12.71□□□□□ -0.37
PCNX4-204ENST00000406949 NXF1Q9UBU9 619 aaKnown RBP12.71□□□□□ -0.37
PCNX4-204ENST00000406949 GOLGA8SH3BPF8 625 aa12.71□□□□□ -0.37
PCNX4-204ENST00000406949 TBC1D12O60347 775 aa12.71□□□□□ -0.37
PCNX4-204ENST00000406949 RPS6KA5O75582 802 aa12.71□□□□□ -0.37
PCNX4-204ENST00000406949 GNA15P30679 374 aa12.71□□□□□ -0.37
PCNX4-204ENST00000406949 RPL21P46778 160 aaKnown RBP12.71□□□□□ -0.37
PCNX4-204ENST00000406949 EIF3BP55884 814 aaKnown RBP12.71□□□□□ -0.37
PCNX4-204ENST00000406949 FMO1Q01740 532 aa12.71□□□□□ -0.37
PCNX4-204ENST00000406949 ZKSCAN8Q15776 578 aaPredicted RBP12.71□□□□□ -0.37
PCNX4-204ENST00000406949 FKBP1CQ5VVH2 108 aa12.71□□□□□ -0.37
PCNX4-204ENST00000406949 CDR2LQ86X02 465 aaPredicted RBP12.71□□□□□ -0.37
PCNX4-204ENST00000406949 MREGQ8N565 214 aa12.71□□□□□ -0.37
PCNX4-204ENST00000406949 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.71□□□□□ -0.37
PCNX4-204ENST00000406949 GMLQ99445 158 aa12.71□□□□□ -0.37
PCNX4-204ENST00000406949 GPR88Q9GZN0 384 aa12.71□□□□□ -0.37
PCNX4-204ENST00000406949 STMN4Q9H169 189 aaPredicted RBP12.71□□□□□ -0.37
PCNX4-204ENST00000406949 GTF3C4Q9UKN8 822 aa12.71□□□□□ -0.37
PCNX4-204ENST00000406949 ZNF148Q9UQR1 794 aa12.71□□□□□ -0.37
PCNX4-204ENST00000406949 LY75O60449 1722 aa12.71□□□□□ -0.37
PCNX4-204ENST00000406949 GJB6O95452 261 aa12.71□□□□□ -0.38
PCNX4-204ENST00000406949 ADSSP30520 456 aa12.71□□□□□ -0.38
PCNX4-204ENST00000406949 RDXP35241 583 aaKnown RBP12.71□□□□□ -0.38
PCNX4-204ENST00000406949 IGBP1P78318 339 aa12.71□□□□□ -0.38
PCNX4-204ENST00000406949 MYBPC2Q14324 1141 aa12.71□□□□□ -0.38
PCNX4-204ENST00000406949 THNSL1Q8IYQ7 743 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms