RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 NAMPTP43490 491 aa13□□□□□ -0.33
SMIM11A-201ENST00000399292 DLX2Q07687 328 aaPredicted RBP13□□□□□ -0.33
SMIM11A-201ENST00000399292 BMS1Q14692 1282 aaKnown RBP13□□□□□ -0.33
SMIM11A-201ENST00000399292 PPP2R5AQ15172 486 aa13□□□□□ -0.33
SMIM11A-201ENST00000399292 ZRSR1Q15695 479 aaKnown RBP13□□□□□ -0.33
SMIM11A-201ENST00000399292 ARL6IP4Q66PJ3 421 aaKnown RBP13□□□□□ -0.33
SMIM11A-201ENST00000399292 CDCA2Q69YH5 1023 aaPredicted RBP13□□□□□ -0.33
SMIM11A-201ENST00000399292 BRAPQ7Z569 592 aa13□□□□□ -0.33
SMIM11A-201ENST00000399292 SLC39A11Q8N1S5 342 aa13□□□□□ -0.33
SMIM11A-201ENST00000399292 SMG8Q8ND04 991 aaKnown RBP13□□□□□ -0.33
SMIM11A-201ENST00000399292 DEPTORQ8TB45 409 aa13□□□□□ -0.33
SMIM11A-201ENST00000399292 KIFAP3Q92845 792 aa13□□□□□ -0.33
SMIM11A-201ENST00000399292 TMEM169Q96HH4 297 aa13□□□□□ -0.33
SMIM11A-201ENST00000399292 PRIMPOLQ96LW4 560 aa13□□□□□ -0.33
SMIM11A-201ENST00000399292 FAM193BQ96PV7 902 aaPredicted RBP13□□□□□ -0.33
SMIM11A-201ENST00000399292 CDCA3Q99618 268 aaPredicted RBP13□□□□□ -0.33
SMIM11A-201ENST00000399292 TCF25Q9BQ70 676 aa13□□□□□ -0.33
SMIM11A-201ENST00000399292 GBP3Q9H0R5 595 aa13□□□□□ -0.33
SMIM11A-201ENST00000399292 FZD8Q9H461 694 aa13□□□□□ -0.33
SMIM11A-201ENST00000399292 POLD4Q9HCU8 107 aa13□□□□□ -0.33
SMIM11A-201ENST00000399292 ENTPD7Q9NQZ7 604 aa13□□□□□ -0.33
SMIM11A-201ENST00000399292 IPPQ9Y573 584 aa13□□□□□ -0.33
SMIM11A-201ENST00000399292 C5orf42Q9H799 3197 aa13□□□□□ -0.33
SMIM11A-201ENST00000399292 FSD2A1L4K1 749 aa12.99□□□□□ -0.33
SMIM11A-201ENST00000399292 VPS37CA5D8V6 355 aaPredicted RBP12.99□□□□□ -0.33
SMIM11A-201ENST00000399292 E9PMD0 336 aa12.99□□□□□ -0.33
SMIM11A-201ENST00000399292 FSCN2O14926 492 aa12.99□□□□□ -0.33
SMIM11A-201ENST00000399292 LINC01565O15544 149 aa12.99□□□□□ -0.33
SMIM11A-201ENST00000399292 B4GALT5O43286 388 aa12.99□□□□□ -0.33
SMIM11A-201ENST00000399292 POMCP01189 267 aa12.99□□□□□ -0.33
SMIM11A-201ENST00000399292 GALTP07902 379 aa12.99□□□□□ -0.33
SMIM11A-201ENST00000399292 NDUFV1P49821 464 aa12.99□□□□□ -0.33
SMIM11A-201ENST00000399292 AFF1P51825 1210 aaKnown RBP12.99□□□□□ -0.33
SMIM11A-201ENST00000399292 MAPK6Q16659 721 aa12.99□□□□□ -0.33
SMIM11A-201ENST00000399292 FAM187BQ17R55 369 aa12.99□□□□□ -0.33
SMIM11A-201ENST00000399292 PLPP4Q5VZY2 271 aa12.99□□□□□ -0.33
SMIM11A-201ENST00000399292 SLC27A1Q6PCB7 646 aa12.99□□□□□ -0.33
SMIM11A-201ENST00000399292 ZNF280BQ86YH2 543 aa12.99□□□□□ -0.33
SMIM11A-201ENST00000399292 KCTD17Q8N5Z5 321 aa12.99□□□□□ -0.33
SMIM11A-201ENST00000399292 BSNDQ8WZ55 320 aa12.99□□□□□ -0.33
SMIM11A-201ENST00000399292 MMTAG2Q9BU76 263 aaKnown RBP12.99□□□□□ -0.33
SMIM11A-201ENST00000399292 FNDC1Q4ZHG4 1894 aaPredicted RBP12.99□□□□□ -0.33
SMIM11A-201ENST00000399292 ARL5CA6NH57 179 aa12.98□□□□□ -0.33
SMIM11A-201ENST00000399292 DDHD2O94830 711 aa12.98□□□□□ -0.33
SMIM11A-201ENST00000399292 CXCL14O95715 111 aa12.98□□□□□ -0.33
SMIM11A-201ENST00000399292 BMP15O95972 392 aa12.98□□□□□ -0.33
SMIM11A-201ENST00000399292 IL9P15248 144 aa12.98□□□□□ -0.33
SMIM11A-201ENST00000399292 EFNA5P52803 228 aa12.98□□□□□ -0.33
SMIM11A-201ENST00000399292 PRPF4BQ13523 1007 aaKnown RBP12.98□□□□□ -0.33
SMIM11A-201ENST00000399292 SMC1AQ14683 1233 aaKnown RBP12.98□□□□□ -0.33
SMIM11A-201ENST00000399292 CLUL1Q15846 466 aa12.98□□□□□ -0.33
SMIM11A-201ENST00000399292 TMEM132AQ24JP5 1023 aa12.98□□□□□ -0.33
SMIM11A-201ENST00000399292 CDR2LQ86X02 465 aaPredicted RBP12.98□□□□□ -0.33
SMIM11A-201ENST00000399292 VPS52Q8N1B4 723 aa12.98□□□□□ -0.33
SMIM11A-201ENST00000399292 MRPL43Q8N983 215 aaKnown RBP12.98□□□□□ -0.33
SMIM11A-201ENST00000399292 INTS4Q96HW7 963 aaKnown RBP12.98□□□□□ -0.33
SMIM11A-201ENST00000399292 IGSF21Q96ID5 467 aa12.98□□□□□ -0.33
SMIM11A-201ENST00000399292 CDK5RAP3Q96JB5 506 aa12.98□□□□□ -0.33
SMIM11A-201ENST00000399292 APOL6Q9BWW8 343 aa12.98□□□□□ -0.33
SMIM11A-201ENST00000399292 NT5C3AQ9H0P0 336 aa12.98□□□□□ -0.33
SMIM11A-201ENST00000399292 DNAJB4Q9UDY4 337 aa12.98□□□□□ -0.33
SMIM11A-201ENST00000399292 CD207Q9UJ71 328 aa12.98□□□□□ -0.33
SMIM11A-201ENST00000399292 FAN1Q9Y2M0 1017 aa12.98□□□□□ -0.33
SMIM11A-201ENST00000399292 GIT1Q9Y2X7 761 aa12.98□□□□□ -0.33
SMIM11A-201ENST00000399292 HES2Q9Y543 173 aa12.98□□□□□ -0.33
SMIM11A-201ENST00000399292 GTF3C3Q9Y5Q9 886 aa12.98□□□□□ -0.33
SMIM11A-201ENST00000399292 HIDE1A8MVS5 230 aa12.97□□□□□ -0.33
SMIM11A-201ENST00000399292 K7ERI5 159 aa12.97□□□□□ -0.33
SMIM11A-201ENST00000399292 ACKR2O00590 384 aa12.97□□□□□ -0.33
SMIM11A-201ENST00000399292 TBX10O75333 385 aa12.97□□□□□ -0.33
SMIM11A-201ENST00000399292 NPTXRO95502 500 aa12.97□□□□□ -0.33
SMIM11A-201ENST00000399292 PRKCBP05771 671 aa12.97□□□□□ -0.33
SMIM11A-201ENST00000399292 LIG1P18858 919 aa12.97□□□□□ -0.33
SMIM11A-201ENST00000399292 AKAP5P24588 427 aa12.97□□□□□ -0.33
SMIM11A-201ENST00000399292 SLC11A1P49279 550 aa12.97□□□□□ -0.33
SMIM11A-201ENST00000399292 RELBQ01201 579 aa12.97□□□□□ -0.33
SMIM11A-201ENST00000399292 DUSP6Q16828 381 aa12.97□□□□□ -0.33
SMIM11A-201ENST00000399292 HYIQ5T013 277 aa12.97□□□□□ -0.33
SMIM11A-201ENST00000399292 RINT1Q6NUQ1 792 aa12.97□□□□□ -0.33
SMIM11A-201ENST00000399292 DDX53Q86TM3 631 aaKnown RBP12.97□□□□□ -0.33
SMIM11A-201ENST00000399292 TMEM173Q86WV6 379 aaPredicted RBP12.97□□□□□ -0.33
SMIM11A-201ENST00000399292 FAM178BQ8IXR5 827 aa12.97□□□□□ -0.33
SMIM11A-201ENST00000399292 TMEM87AQ8NBN3 555 aa12.97□□□□□ -0.33
SMIM11A-201ENST00000399292 MSLNLQ96KJ4 702 aa12.97□□□□□ -0.33
SMIM11A-201ENST00000399292 AK8Q96MA6 479 aa12.97□□□□□ -0.33
SMIM11A-201ENST00000399292 GAD1Q99259 594 aa12.97□□□□□ -0.33
SMIM11A-201ENST00000399292 TMEM175Q9BSA9 504 aa12.97□□□□□ -0.33
SMIM11A-201ENST00000399292 NXF3Q9H4D5 531 aaKnown RBP12.97□□□□□ -0.33
SMIM11A-201ENST00000399292 CLEC1BQ9P126 229 aa12.97□□□□□ -0.33
SMIM11A-201ENST00000399292 STK39Q9UEW8 545 aa12.97□□□□□ -0.33
SMIM11A-201ENST00000399292 PARP2Q9UGN5 583 aa12.97□□□□□ -0.33
SMIM11A-201ENST00000399292 MYO7AQ13402 2215 aa12.96□□□□□ -0.33
SMIM11A-201ENST00000399292 C2orf71A6NGG8 1288 aa12.96□□□□□ -0.33
SMIM11A-201ENST00000399292 CCDC169A6NNP5 214 aa12.96□□□□□ -0.33
SMIM11A-201ENST00000399292 K7ELQ4 463 aaPredicted RBP12.96□□□□□ -0.33
SMIM11A-201ENST00000399292 NRP1O14786 923 aa12.96□□□□□ -0.33
SMIM11A-201ENST00000399292 N4BP3O15049 544 aa12.96□□□□□ -0.33
SMIM11A-201ENST00000399292 INPPL1O15357 1258 aa12.96□□□□□ -0.33
SMIM11A-201ENST00000399292 MBTPS2O43462 519 aa12.96□□□□□ -0.33
SMIM11A-201ENST00000399292 SSBP05455 408 aaKnown RBP eCLIP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms