RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 ITGA4P13612 1032 aa7.44□□□□□ -1.22
SMCO1-201ENST00000397537 KRT13P13646 458 aa7.44□□□□□ -1.22
SMCO1-201ENST00000397537 RPS2P15880 293 aaKnown RBP7.44□□□□□ -1.22
SMCO1-201ENST00000397537 MSH2P43246 934 aa7.44□□□□□ -1.22
SMCO1-201ENST00000397537 CCR9P51686 369 aa7.44□□□□□ -1.22
SMCO1-201ENST00000397537 AKAP17AQ02040 695 aaKnown RBP7.44□□□□□ -1.22
SMCO1-201ENST00000397537 UBE3AQ05086 875 aa7.44□□□□□ -1.22
SMCO1-201ENST00000397537 AUHQ13825 339 aaKnown RBP7.44□□□□□ -1.22
SMCO1-201ENST00000397537 ANKDD1AQ495B1 522 aa7.44□□□□□ -1.22
SMCO1-201ENST00000397537 FRMD7Q6ZUT3 714 aa7.44□□□□□ -1.22
SMCO1-201ENST00000397537 Q8NFD4 153 aa7.44□□□□□ -1.22
SMCO1-201ENST00000397537 BAHD1Q8TBE0 780 aaPredicted RBP7.44□□□□□ -1.22
SMCO1-201ENST00000397537 RNF217Q8TC41 542 aa7.44□□□□□ -1.22
SMCO1-201ENST00000397537 BICD2Q8TD16 824 aa7.44□□□□□ -1.22
SMCO1-201ENST00000397537 STYXQ8WUJ0 223 aa7.44□□□□□ -1.22
SMCO1-201ENST00000397537 ITFG2Q969R8 447 aa7.44□□□□□ -1.22
SMCO1-201ENST00000397537 FSD1Q9BTV5 496 aa7.44□□□□□ -1.22
SMCO1-201ENST00000397537 MKRN2Q9H000 416 aaKnown RBP7.44□□□□□ -1.22
SMCO1-201ENST00000397537 TOR4AQ9NXH8 423 aa7.44□□□□□ -1.22
SMCO1-201ENST00000397537 HCSTQ9UBK5 93 aa7.44□□□□□ -1.22
SMCO1-201ENST00000397537 DUSP12Q9UNI6 340 aa7.44□□□□□ -1.22
SMCO1-201ENST00000397537 SCAF8Q9UPN6 1271 aaKnown RBP7.44□□□□□ -1.22
SMCO1-201ENST00000397537 A2MP01023 1474 aa7.44□□□□□ -1.22
SMCO1-201ENST00000397537 BLMP54132 1417 aaPredicted RBP7.44□□□□□ -1.22
SMCO1-201ENST00000397537 AHDC1Q5TGY3 1603 aaPredicted RBP7.44□□□□□ -1.22
SMCO1-201ENST00000397537 SAMD9LQ8IVG5 1584 aa7.44□□□□□ -1.22
SMCO1-201ENST00000397537 CCDC154A6NI56 674 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 FAM25EA8MYX2 175 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 AP3D1O14617 1153 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 MTSS1O43312 755 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 HTRA2O43464 458 aaPredicted RBP7.43□□□□□ -1.22
SMCO1-201ENST00000397537 KIF5CO60282 957 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 FAM155BO75949 473 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 NR2F1P10589 423 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 GBP1P32455 592 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 IL12RB1P42701 662 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 MAP2K6P52564 334 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 ZNF445P59923 1031 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 POU4F2Q12837 409 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 ARHGAP44Q17R89 818 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 MUM1L1Q5H9M0 696 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 CNKSR3Q6P9H4 555 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 RSPO2Q6UXX9 243 aaPredicted RBP7.43□□□□□ -1.22
SMCO1-201ENST00000397537 C12orf40Q86WS4 652 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 RAB11FIP4Q86YS3 637 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 PPIL6Q8IXY8 311 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 CCAR2Q8N163 923 aaKnown RBP7.43□□□□□ -1.22
SMCO1-201ENST00000397537 RUBCNQ92622 972 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 ITPKCQ96DU7 683 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 TEX13BQ9BXU2 312 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 MYO1AQ9UBC5 1043 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 LAMP5Q9UJQ1 280 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 OGDHLQ9ULD0 1010 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 CBLCQ9ULV8 474 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 DIP2AQ14689 1571 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 MSH6P52701 1360 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 PASKQ96RG2 1323 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 SCAF11Q99590 1463 aaKnown RBP7.43□□□□□ -1.22
SMCO1-201ENST00000397537 SYNJ2BP-COX16A0A087WUM0 186 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 LRRC14BA6NHZ5 514 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 NT5C1B-RDH14C9J2C7 533 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 WNT9AO14904 365 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 MUSKO15146 869 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 SPTLC2O15270 562 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 PCP11498 1178 aaKnown RBP7.43□□□□□ -1.22
SMCO1-201ENST00000397537 FGFR2P21802 821 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 HSPA4P34932 840 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 DPP6P42658 865 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 NLRP12P59046 1061 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 CHRNDQ07001 517 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 C17orf67Q0P5P2 114 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 TFCP2Q12800 502 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 EIF4A2Q14240 407 aaKnown RBP7.43□□□□□ -1.22
SMCO1-201ENST00000397537 ADCK5Q3MIX3 580 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 C3orf36Q3SXR2 165 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 CIAPIN1Q6FI81 312 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 DHX32Q7L7V1 743 aaKnown RBP7.43□□□□□ -1.22
SMCO1-201ENST00000397537 ZER1Q7Z7L7 766 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 PRPF39Q86UA1 669 aaKnown RBP7.43□□□□□ -1.22
SMCO1-201ENST00000397537 IQCF2Q8IXL9 164 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 UHMK1Q8TAS1 419 aaKnown RBP7.43□□□□□ -1.22
SMCO1-201ENST00000397537 OTUD7AQ8TE49 926 aaPredicted RBP7.43□□□□□ -1.22
SMCO1-201ENST00000397537 EPS8L2Q9H6S3 715 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 IGSF9Q9P2J2 1179 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 TIAM1Q13009 1591 aa7.43□□□□□ -1.22
SMCO1-201ENST00000397537 SPAG9O60271 1321 aaKnown RBP7.42□□□□□ -1.22
SMCO1-201ENST00000397537 A0A1W2PPL8 197 aa7.42□□□□□ -1.22
SMCO1-201ENST00000397537 NDC80O14777 642 aa7.42□□□□□ -1.22
SMCO1-201ENST00000397537 SOCS5O75159 536 aa7.42□□□□□ -1.22
SMCO1-201ENST00000397537 HNRNPA1P09651 372 aaKnown RBP eCLIP7.42□□□□□ -1.22
SMCO1-201ENST00000397537 SFTPCP11686 197 aa7.42□□□□□ -1.22
SMCO1-201ENST00000397537 LTKP29376 864 aa7.42□□□□□ -1.22
SMCO1-201ENST00000397537 MLH1P40692 756 aa7.42□□□□□ -1.22
SMCO1-201ENST00000397537 CD151P48509 253 aa7.42□□□□□ -1.22
SMCO1-201ENST00000397537 HTRA4P83105 476 aaPredicted RBP7.42□□□□□ -1.22
SMCO1-201ENST00000397537 CREB5Q02930 508 aa7.42□□□□□ -1.22
SMCO1-201ENST00000397537 LRMPQ12912 555 aa7.42□□□□□ -1.22
SMCO1-201ENST00000397537 PLS1Q14651 629 aa7.42□□□□□ -1.22
SMCO1-201ENST00000397537 CNGA2Q16280 664 aa7.42□□□□□ -1.22
SMCO1-201ENST00000397537 ODF2Q5BJF6 829 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms