RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 SNTG2Q9NY99 539 aa11.56□□□□□ -0.56
NUP98-205ENST00000397007 HELZP42694 1942 aaKnown RBP11.56□□□□□ -0.56
NUP98-205ENST00000397007 GOLGA6L4A6NEF3 574 aa11.56□□□□□ -0.56
NUP98-205ENST00000397007 TBC1D4O60343 1298 aa11.56□□□□□ -0.56
NUP98-205ENST00000397007 ERLIN2O94905 339 aa11.56□□□□□ -0.56
NUP98-205ENST00000397007 C4BPAP04003 597 aaKnown RBP11.56□□□□□ -0.56
NUP98-205ENST00000397007 ACTN1P12814 892 aa11.56□□□□□ -0.56
NUP98-205ENST00000397007 IGFBP6P24592 240 aaPredicted RBP11.56□□□□□ -0.56
NUP98-205ENST00000397007 ERVK-21P61565 698 aa11.56□□□□□ -0.56
NUP98-205ENST00000397007 TMCO2Q7Z6W1 182 aaPredicted RBP11.56□□□□□ -0.56
NUP98-205ENST00000397007 GPR65Q8IYL9 337 aa11.56□□□□□ -0.56
NUP98-205ENST00000397007 UBR7Q8N806 425 aa11.56□□□□□ -0.56
NUP98-205ENST00000397007 RASSF8Q8NHQ8 419 aa11.56□□□□□ -0.56
NUP98-205ENST00000397007 CCDC43Q96MW1 224 aaKnown RBP11.56□□□□□ -0.56
NUP98-205ENST00000397007 SIX4Q9UIU6 781 aa11.56□□□□□ -0.56
NUP98-205ENST00000397007 HES2Q9Y543 173 aa11.56□□□□□ -0.56
NUP98-205ENST00000397007 MRPL42Q9Y6G3 142 aaKnown RBP11.56□□□□□ -0.56
NUP98-205ENST00000397007 LINC01553A4QN01 128 aa11.56□□□□□ -0.56
NUP98-205ENST00000397007 GOLGA6L22H0YM25 854 aa11.56□□□□□ -0.56
NUP98-205ENST00000397007 FGFR1P11362 822 aa11.56□□□□□ -0.56
NUP98-205ENST00000397007 IDEP14735 1019 aa11.56□□□□□ -0.56
NUP98-205ENST00000397007 STRN3Q13033 797 aa11.56□□□□□ -0.56
NUP98-205ENST00000397007 UPP1Q16831 310 aa11.56□□□□□ -0.56
NUP98-205ENST00000397007 MIIPQ5JXC2 388 aa11.56□□□□□ -0.56
NUP98-205ENST00000397007 SPATA1Q5VX52 437 aa11.56□□□□□ -0.56
NUP98-205ENST00000397007 OTOP2Q7RTS6 562 aa11.56□□□□□ -0.56
NUP98-205ENST00000397007 TRIM59Q8IWR1 403 aa11.56□□□□□ -0.56
NUP98-205ENST00000397007 RAD9AQ99638 391 aa11.56□□□□□ -0.56
NUP98-205ENST00000397007 KIAA1586Q9HCI6 787 aa11.56□□□□□ -0.56
NUP98-205ENST00000397007 TBC1D13Q9NVG8 400 aa11.56□□□□□ -0.56
NUP98-205ENST00000397007 AGO2Q9UKV8 859 aaKnown RBP11.56□□□□□ -0.56
NUP98-205ENST00000397007 SMIM28A0A1B0GU29 152 aa11.55□□□□□ -0.56
NUP98-205ENST00000397007 IKBKBO14920 756 aa11.55□□□□□ -0.56
NUP98-205ENST00000397007 TAP1Q03518 808 aa11.55□□□□□ -0.56
NUP98-205ENST00000397007 KCNC3Q14003 757 aa11.55□□□□□ -0.56
NUP98-205ENST00000397007 ZNF568Q3ZCX4 644 aa11.55□□□□□ -0.56
NUP98-205ENST00000397007 CDR2LQ86X02 465 aaPredicted RBP11.55□□□□□ -0.56
NUP98-205ENST00000397007 CBWD2Q8IUF1 395 aa11.55□□□□□ -0.56
NUP98-205ENST00000397007 PARD3BQ8TEW8 1205 aa11.55□□□□□ -0.56
NUP98-205ENST00000397007 LPPQ93052 612 aa11.55□□□□□ -0.56
NUP98-205ENST00000397007 HCSTQ9UBK5 93 aa11.55□□□□□ -0.56
NUP98-205ENST00000397007 PRKAG2Q9UGJ0 569 aa11.55□□□□□ -0.56
NUP98-205ENST00000397007 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.55□□□□□ -0.56
NUP98-205ENST00000397007 CLDN3O15551 220 aa11.55□□□□□ -0.56
NUP98-205ENST00000397007 LDHAP00338 332 aaKnown RBP11.55□□□□□ -0.56
NUP98-205ENST00000397007 GRIK3Q13003 919 aa11.55□□□□□ -0.56
NUP98-205ENST00000397007 STXBP4Q6ZWJ1 553 aa11.55□□□□□ -0.56
NUP98-205ENST00000397007 SPRED2Q7Z698 418 aa11.55□□□□□ -0.56
NUP98-205ENST00000397007 TMEM130Q8N3G9 435 aa11.55□□□□□ -0.56
NUP98-205ENST00000397007 C3orf58Q8NDZ4 430 aa11.55□□□□□ -0.56
NUP98-205ENST00000397007 XYLT2Q9H1B5 865 aa11.55□□□□□ -0.56
NUP98-205ENST00000397007 RSAD1Q9HA92 442 aa11.55□□□□□ -0.56
NUP98-205ENST00000397007 RNF216Q9NWF9 866 aaPredicted RBP11.55□□□□□ -0.56
NUP98-205ENST00000397007 LRRIQ3A6PVS8 624 aaPredicted RBP11.55□□□□□ -0.56
NUP98-205ENST00000397007 HNRNPDLO14979 420 aaKnown RBP11.55□□□□□ -0.56
NUP98-205ENST00000397007 VNN1O95497 513 aa11.55□□□□□ -0.56
NUP98-205ENST00000397007 KRT18P05783 430 aaKnown RBP11.55□□□□□ -0.56
NUP98-205ENST00000397007 TYRO3Q06418 890 aa11.55□□□□□ -0.56
NUP98-205ENST00000397007 PDE4DIPQ5VU43 2346 aa11.54□□□□□ -0.56
NUP98-205ENST00000397007 EPOPA6NHQ4 379 aa11.54□□□□□ -0.56
NUP98-205ENST00000397007 LACTBL1A8MY62 500 aa11.54□□□□□ -0.56
NUP98-205ENST00000397007 LETM1O95202 739 aaPredicted RBP11.54□□□□□ -0.56
NUP98-205ENST00000397007 PBX2P40425 430 aa11.54□□□□□ -0.56
NUP98-205ENST00000397007 PLCB3Q01970 1234 aa11.54□□□□□ -0.56
NUP98-205ENST00000397007 MRPL58Q14197 206 aaKnown RBP11.54□□□□□ -0.56
NUP98-205ENST00000397007 SNRNP35Q16560 246 aaKnown RBP11.54□□□□□ -0.56
NUP98-205ENST00000397007 ZNF280BQ86YH2 543 aa11.54□□□□□ -0.56
NUP98-205ENST00000397007 SLC35C1Q96A29 364 aa11.54□□□□□ -0.56
NUP98-205ENST00000397007 TTYH1Q9H313 450 aaPredicted RBP11.54□□□□□ -0.56
NUP98-205ENST00000397007 NRDE2Q9H7Z3 1164 aa11.54□□□□□ -0.56
NUP98-205ENST00000397007 IL18RAPO95256 599 aa11.54□□□□□ -0.56
NUP98-205ENST00000397007 CXCL8P10145 99 aa11.54□□□□□ -0.56
NUP98-205ENST00000397007 ATP2A2P16615 1042 aaKnown RBP11.54□□□□□ -0.56
NUP98-205ENST00000397007 LIG4P49917 911 aa11.54□□□□□ -0.56
NUP98-205ENST00000397007 FRMD5Q7Z6J6 570 aa11.54□□□□□ -0.56
NUP98-205ENST00000397007 WDR49Q8IV35 697 aa11.54□□□□□ -0.56
NUP98-205ENST00000397007 XXYLT1Q8NBI6 393 aa11.54□□□□□ -0.56
NUP98-205ENST00000397007 NELFBQ8WX92 580 aa11.54□□□□□ -0.56
NUP98-205ENST00000397007 PGBD4Q96DM1 585 aa11.54□□□□□ -0.56
NUP98-205ENST00000397007 FAXDC2Q96IV6 333 aa11.54□□□□□ -0.56
NUP98-205ENST00000397007 ZFP42Q96MM3 310 aa11.54□□□□□ -0.56
NUP98-205ENST00000397007 UBE2OQ9C0C9 1292 aaKnown RBP11.54□□□□□ -0.56
NUP98-205ENST00000397007 THAP9Q9H5L6 903 aa11.54□□□□□ -0.56
NUP98-205ENST00000397007 M0QZQ0 153 aa11.54□□□□□ -0.56
NUP98-205ENST00000397007 HOXA2O43364 376 aa11.54□□□□□ -0.56
NUP98-205ENST00000397007 GTF2H1P32780 548 aa11.54□□□□□ -0.56
NUP98-205ENST00000397007 DLG4P78352 724 aa11.54□□□□□ -0.56
NUP98-205ENST00000397007 SLC39A11Q8N1S5 342 aa11.54□□□□□ -0.56
NUP98-205ENST00000397007 PKMYT1Q99640 499 aa11.54□□□□□ -0.56
NUP98-205ENST00000397007 CGRRF1Q99675 332 aa11.54□□□□□ -0.56
NUP98-205ENST00000397007 MSTO1Q9BUK6 570 aa11.54□□□□□ -0.56
NUP98-205ENST00000397007 PLVAPQ9BX97 442 aa11.54□□□□□ -0.56
NUP98-205ENST00000397007 INSL6Q9Y581 213 aa11.54□□□□□ -0.56
NUP98-205ENST00000397007 ANAPC1Q9H1A4 1944 aa11.54□□□□□ -0.56
NUP98-205ENST00000397007 NUP210Q8TEM1 1887 aaPredicted RBP11.53□□□□□ -0.56
NUP98-205ENST00000397007 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.53□□□□□ -0.56
NUP98-205ENST00000397007 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.53□□□□□ -0.56
NUP98-205ENST00000397007 C1RP00736 705 aa11.53□□□□□ -0.56
NUP98-205ENST00000397007 MLH1P40692 756 aa11.53□□□□□ -0.56
NUP98-205ENST00000397007 PAK1Q13153 545 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms