RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 FAM171A1Q5VUB5 890 aa9.38□□□□□ -0.91
SCFD1-202ENST00000396629 TANGO2Q6ICL3 276 aa9.38□□□□□ -0.91
SCFD1-202ENST00000396629 PDXDC1Q6P996 788 aa9.38□□□□□ -0.91
SCFD1-202ENST00000396629 PRR23CQ6ZRP0 262 aa9.38□□□□□ -0.91
SCFD1-202ENST00000396629 SLC7A14Q8TBB6 771 aa9.38□□□□□ -0.91
SCFD1-202ENST00000396629 PAAF1Q9BRP4 392 aa9.38□□□□□ -0.91
SCFD1-202ENST00000396629 TRIM6Q9C030 488 aaPredicted RBP9.38□□□□□ -0.91
SCFD1-202ENST00000396629 CACNG4Q9UBN1 327 aa9.38□□□□□ -0.91
SCFD1-202ENST00000396629 PCDHA4Q9UN74 947 aa9.38□□□□□ -0.91
SCFD1-202ENST00000396629 HMGB1P09429 215 aaKnown RBP9.38□□□□□ -0.91
SCFD1-202ENST00000396629 IFNAR1P17181 557 aa9.38□□□□□ -0.91
SCFD1-202ENST00000396629 PMLP29590 882 aa9.38□□□□□ -0.91
SCFD1-202ENST00000396629 NLRP5P59047 1200 aa9.38□□□□□ -0.91
SCFD1-202ENST00000396629 OTUD6AQ7L8S5 288 aa9.38□□□□□ -0.91
SCFD1-202ENST00000396629 ING5Q8WYH8 240 aa9.38□□□□□ -0.91
SCFD1-202ENST00000396629 DDX1Q92499 740 aaKnown RBP9.38□□□□□ -0.91
SCFD1-202ENST00000396629 MCRS1Q96EZ8 462 aa9.38□□□□□ -0.91
SCFD1-202ENST00000396629 MTRQ99707 1265 aa9.38□□□□□ -0.91
SCFD1-202ENST00000396629 SLC26A6Q9BXS9 759 aa9.38□□□□□ -0.91
SCFD1-202ENST00000396629 NFKBIZQ9BYH8 718 aa9.38□□□□□ -0.91
SCFD1-202ENST00000396629 XPNPEP1Q9NQW7 623 aa9.38□□□□□ -0.91
SCFD1-202ENST00000396629 BMP2KQ9NSY1 1161 aaPredicted RBP9.38□□□□□ -0.91
SCFD1-202ENST00000396629 KLK14Q9P0G3 267 aa9.38□□□□□ -0.91
SCFD1-202ENST00000396629 DDX25Q9UHL0 483 aaKnown RBP9.38□□□□□ -0.91
SCFD1-202ENST00000396629 ANGPTL2Q9UKU9 493 aa9.38□□□□□ -0.91
SCFD1-202ENST00000396629 MRPS23Q9Y3D9 190 aaKnown RBP9.38□□□□□ -0.91
SCFD1-202ENST00000396629 INO80B-WBP1J3KQ70 363 aa9.37□□□□□ -0.91
SCFD1-202ENST00000396629 FOXD2O60548 495 aaPredicted RBP9.37□□□□□ -0.91
SCFD1-202ENST00000396629 KIF4AO95239 1232 aa9.37□□□□□ -0.91
SCFD1-202ENST00000396629 NPTXRO95502 500 aa9.37□□□□□ -0.91
SCFD1-202ENST00000396629 FCARP24071 287 aa9.37□□□□□ -0.91
SCFD1-202ENST00000396629 YWHABP31946 246 aaKnown RBP9.37□□□□□ -0.91
SCFD1-202ENST00000396629 CCR3P51677 355 aa9.37□□□□□ -0.91
SCFD1-202ENST00000396629 SHC2P98077 582 aa9.37□□□□□ -0.91
SCFD1-202ENST00000396629 ELAVL2Q12926 359 aaKnown RBP9.37□□□□□ -0.91
SCFD1-202ENST00000396629 TFDP1Q14186 410 aa9.37□□□□□ -0.91
SCFD1-202ENST00000396629 EPHA7Q15375 998 aa9.37□□□□□ -0.91
SCFD1-202ENST00000396629 SLC27A1Q6PCB7 646 aa9.37□□□□□ -0.91
SCFD1-202ENST00000396629 Q6ZUG5 572 aa9.37□□□□□ -0.91
SCFD1-202ENST00000396629 CEP57Q86XR8 500 aa9.37□□□□□ -0.91
SCFD1-202ENST00000396629 FBXL16Q8N461 479 aa9.37□□□□□ -0.91
SCFD1-202ENST00000396629 FAM20AQ96MK3 541 aa9.37□□□□□ -0.91
SCFD1-202ENST00000396629 KCNMB3Q9NPA1 279 aa9.37□□□□□ -0.91
SCFD1-202ENST00000396629 TRPV5Q9NQA5 729 aa9.37□□□□□ -0.91
SCFD1-202ENST00000396629 PARP2Q9UGN5 583 aa9.37□□□□□ -0.91
SCFD1-202ENST00000396629 NDRG2Q9UN36 371 aaKnown RBP9.37□□□□□ -0.91
SCFD1-202ENST00000396629 TRIP11Q15643 1979 aa9.37□□□□□ -0.91
SCFD1-202ENST00000396629 A0A1B0GUA9 196 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 HRO43593 1189 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 SLC37A4O43826 429 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 GDF9O60383 454 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 RHOP08100 348 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 CNR2P34972 360 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 OR1D2P34982 312 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 CAPSQ13938 189 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 NAB2Q15742 525 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 SLC5A9Q2M3M2 681 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 XKR9Q5GH70 373 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.36□□□□□ -0.91
SCFD1-202ENST00000396629 PRR23BQ6ZRT6 265 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 BLIDQ8IZY5 108 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 DAGLBQ8NCG7 672 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 ASAP3Q8TDY4 903 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 HASPINQ8TF76 798 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 BRF1Q92994 677 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 LXNQ9BS40 222 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 LMAN1LQ9HAT1 526 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 MTRRQ9UBK8 725 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 BAHCC1Q9P281 2608 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 CASTOR2A6NHX0 329 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 PTGESO14684 152 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 TM4SF5O14894 197 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 ZBTB39O15060 712 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 B4GALT5O43286 388 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 CEBPBP17676 345 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 FGFR3P22607 806 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 ARL2P36404 184 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 LIMK1P53667 647 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 FGD1P98174 961 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 SATB1Q01826 763 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 SIM2Q14190 667 aaPredicted RBP9.36□□□□□ -0.91
SCFD1-202ENST00000396629 NPY5RQ15761 445 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 PRSS36Q5K4E3 855 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 N4BP2L1Q5TBK1 243 aaPredicted RBP9.36□□□□□ -0.91
SCFD1-202ENST00000396629 CDR2LQ86X02 465 aaPredicted RBP9.36□□□□□ -0.91
SCFD1-202ENST00000396629 MAP4K3Q8IVH8 894 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 FAM3CQ92520 227 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 AGXT2Q9BYV1 514 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 BRD9Q9H8M2 597 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 RGL1Q9NZL6 768 aa9.36□□□□□ -0.91
SCFD1-202ENST00000396629 RALYQ9UKM9 306 aaKnown RBP9.36□□□□□ -0.91
SCFD1-202ENST00000396629 F5P12259 2224 aa9.35□□□□□ -0.91
SCFD1-202ENST00000396629 ARHGEF37A1IGU5 675 aa9.35□□□□□ -0.91
SCFD1-202ENST00000396629 MICAL2O94851 1124 aa9.35□□□□□ -0.91
SCFD1-202ENST00000396629 PAPSS2O95340 614 aaPredicted RBP9.35□□□□□ -0.91
SCFD1-202ENST00000396629 THP07101 528 aa9.35□□□□□ -0.91
SCFD1-202ENST00000396629 CHRNB1P11230 501 aa9.35□□□□□ -0.91
SCFD1-202ENST00000396629 CPA1P15085 419 aa9.35□□□□□ -0.91
SCFD1-202ENST00000396629 PTPN2P17706 415 aa9.35□□□□□ -0.91
SCFD1-202ENST00000396629 CXCL12P48061 93 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms