RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 ZMAT2Q96NC0 199 aaKnown RBP21.72■■□□□ 1.07
SNCA-203ENST00000394986 SPG21Q9NZD8 308 aa21.72■■□□□ 1.07
SNCA-203ENST00000394986 AGO2Q9UKV8 859 aaKnown RBP21.72■■□□□ 1.07
SNCA-203ENST00000394986 NRP1O14786 923 aa21.72■■□□□ 1.07
SNCA-203ENST00000394986 RHOBTB3O94955 611 aa21.72■■□□□ 1.07
SNCA-203ENST00000394986 THP07101 528 aa21.72■■□□□ 1.07
SNCA-203ENST00000394986 CLTAP09496 248 aa21.72■■□□□ 1.07
SNCA-203ENST00000394986 OR1G1P47890 313 aa21.72■■□□□ 1.07
SNCA-203ENST00000394986 SPAG1Q07617 926 aa21.72■■□□□ 1.07
SNCA-203ENST00000394986 CAMK1Q14012 370 aa21.72■■□□□ 1.07
SNCA-203ENST00000394986 NAB2Q15742 525 aa21.72■■□□□ 1.07
SNCA-203ENST00000394986 ENOX2Q16206 610 aaKnown RBP21.72■■□□□ 1.07
SNCA-203ENST00000394986 SLFN12LQ6IEE8 588 aa21.72■■□□□ 1.07
SNCA-203ENST00000394986 TMEM130Q8N3G9 435 aa21.72■■□□□ 1.07
SNCA-203ENST00000394986 POF1BQ8WVV4 589 aa21.72■■□□□ 1.07
SNCA-203ENST00000394986 PPP1R10Q96QC0 940 aaKnown RBP21.72■■□□□ 1.07
SNCA-203ENST00000394986 PAAF1Q9BRP4 392 aa21.72■■□□□ 1.07
SNCA-203ENST00000394986 PCIF1Q9H4Z3 704 aa21.72■■□□□ 1.07
SNCA-203ENST00000394986 STXBP5LQ9Y2K9 1186 aa21.72■■□□□ 1.07
SNCA-203ENST00000394986 SMIM28A0A1B0GU29 152 aa21.71■■□□□ 1.07
SNCA-203ENST00000394986 CASTOR2A6NHX0 329 aa21.71■■□□□ 1.07
SNCA-203ENST00000394986 TGFB1I1O43294 461 aa21.71■■□□□ 1.07
SNCA-203ENST00000394986 PPM1AP35813 382 aa21.71■■□□□ 1.07
SNCA-203ENST00000394986 PSMD2Q13200 908 aa21.71■■□□□ 1.07
SNCA-203ENST00000394986 CCDC85BQ15834 202 aaPredicted RBP21.71■■□□□ 1.07
SNCA-203ENST00000394986 BMT2Q1RMZ1 405 aa21.71■■□□□ 1.07
SNCA-203ENST00000394986 XKR4Q5GH76 650 aa21.71■■□□□ 1.07
SNCA-203ENST00000394986 PPM1EQ8WY54 764 aa21.71■■□□□ 1.07
SNCA-203ENST00000394986 MRPL38Q96DV4 380 aaKnown RBP21.71■■□□□ 1.07
SNCA-203ENST00000394986 IGSF21Q96ID5 467 aa21.71■■□□□ 1.07
SNCA-203ENST00000394986 GBP4Q96PP9 640 aa21.71■■□□□ 1.07
SNCA-203ENST00000394986 TMEM175Q9BSA9 504 aa21.71■■□□□ 1.07
SNCA-203ENST00000394986 GOLGA2P5Q9HBQ8 144 aa21.71■■□□□ 1.07
SNCA-203ENST00000394986 MARCH5Q9NX47 278 aa21.71■■□□□ 1.07
SNCA-203ENST00000394986 CNTN3Q9P232 1028 aa21.71■■□□□ 1.07
SNCA-203ENST00000394986 CPSF3Q9UKF6 684 aaKnown RBP21.71■■□□□ 1.07
SNCA-203ENST00000394986 FAN1Q9Y2M0 1017 aa21.71■■□□□ 1.07
SNCA-203ENST00000394986 PCDHGC5Q9Y5F6 944 aa21.71■■□□□ 1.07
SNCA-203ENST00000394986 UBE4BO95155 1302 aa21.71■■□□□ 1.07
SNCA-203ENST00000394986 MYO9BQ13459 2157 aa21.7■■□□□ 1.06
SNCA-203ENST00000394986 GOLGA8IPA6NC78 632 aa21.7■■□□□ 1.06
SNCA-203ENST00000394986 GOLGA8JA6NMD2 632 aa21.7■■□□□ 1.06
SNCA-203ENST00000394986 POU3F3P20264 500 aaPredicted RBP21.7■■□□□ 1.06
SNCA-203ENST00000394986 IRS1P35568 1242 aa21.7■■□□□ 1.06
SNCA-203ENST00000394986 SOX4Q06945 474 aaPredicted RBP21.7■■□□□ 1.06
SNCA-203ENST00000394986 TUSC3Q13454 348 aa21.7■■□□□ 1.06
SNCA-203ENST00000394986 ARMCX5Q6P1M9 558 aa21.7■■□□□ 1.06
SNCA-203ENST00000394986 CRELD2Q6UXH1 353 aaPredicted RBP21.7■■□□□ 1.06
SNCA-203ENST00000394986 NOC3LQ8WTT2 800 aaKnown RBP21.7■■□□□ 1.06
SNCA-203ENST00000394986 CCDC47Q96A33 483 aaKnown RBP21.7■■□□□ 1.06
SNCA-203ENST00000394986 FAM212AQ96EL1 285 aa21.7■■□□□ 1.06
SNCA-203ENST00000394986 LMBRD1Q9NUN5 540 aa21.7■■□□□ 1.06
SNCA-203ENST00000394986 PCDHA5Q9Y5H7 936 aa21.7■■□□□ 1.06
SNCA-203ENST00000394986 ALDH2P05091 517 aa21.69■■□□□ 1.06
SNCA-203ENST00000394986 GARTP22102 1010 aa21.69■■□□□ 1.06
SNCA-203ENST00000394986 PLCB3Q01970 1234 aa21.69■■□□□ 1.06
SNCA-203ENST00000394986 KCNB1Q14721 858 aa21.69■■□□□ 1.06
SNCA-203ENST00000394986 PTPROQ16827 1216 aa21.69■■□□□ 1.06
SNCA-203ENST00000394986 SMYD4Q8IYR2 804 aaPredicted RBP21.69■■□□□ 1.06
SNCA-203ENST00000394986 MAFAQ8NHW3 353 aaPredicted RBP21.69■■□□□ 1.06
SNCA-203ENST00000394986 C18orf25Q96B23 403 aaPredicted RBP21.69■■□□□ 1.06
SNCA-203ENST00000394986 TMEM169Q96HH4 297 aa21.69■■□□□ 1.06
SNCA-203ENST00000394986 FAM213AQ9BRX8 229 aa21.69■■□□□ 1.06
SNCA-203ENST00000394986 VN1R3Q9BXE9 311 aa21.69■■□□□ 1.06
SNCA-203ENST00000394986 RPF1Q9H9Y2 349 aaKnown RBP21.69■■□□□ 1.06
SNCA-203ENST00000394986 AGPAT3Q9NRZ7 376 aa21.69■■□□□ 1.06
SNCA-203ENST00000394986 MAPK8IP1Q9UQF2 711 aa21.69■■□□□ 1.06
SNCA-203ENST00000394986 TTC26A0AVF1 554 aa21.68■■□□□ 1.06
SNCA-203ENST00000394986 LACTBL1A8MY62 500 aa21.68■■□□□ 1.06
SNCA-203ENST00000394986 CLIC2O15247 247 aa21.68■■□□□ 1.06
SNCA-203ENST00000394986 ERVFC1P60507 584 aa21.68■■□□□ 1.06
SNCA-203ENST00000394986 PPP2R3AQ06190 1150 aa21.68■■□□□ 1.06
SNCA-203ENST00000394986 KYAT1Q16773 422 aa21.68■■□□□ 1.06
SNCA-203ENST00000394986 KNOP1Q1ED39 458 aaKnown RBP21.68■■□□□ 1.06
SNCA-203ENST00000394986 SMARCE1Q969G3 411 aa21.68■■□□□ 1.06
SNCA-203ENST00000394986 PLXNA4Q9HCM2 1894 aa21.67■■□□□ 1.06
SNCA-203ENST00000394986 KCNE1P15382 129 aa21.67■■□□□ 1.06
SNCA-203ENST00000394986 IGFBP6P24592 240 aaPredicted RBP21.67■■□□□ 1.06
SNCA-203ENST00000394986 KRT17Q04695 432 aa21.67■■□□□ 1.06
SNCA-203ENST00000394986 SPATA20Q8TB22 786 aa21.67■■□□□ 1.06
SNCA-203ENST00000394986 HASPINQ8TF76 798 aa21.67■■□□□ 1.06
SNCA-203ENST00000394986 LMAN2LQ9H0V9 348 aa21.67■■□□□ 1.06
SNCA-203ENST00000394986 TLR9Q9NR96 1032 aa21.67■■□□□ 1.06
SNCA-203ENST00000394986 LMCD1Q9NZU5 365 aa21.67■■□□□ 1.06
SNCA-203ENST00000394986 TUBGCP4Q9UGJ1 667 aa21.67■■□□□ 1.06
SNCA-203ENST00000394986 HOOK1Q9UJC3 728 aaKnown RBP21.67■■□□□ 1.06
SNCA-203ENST00000394986 TULP1O00294 542 aaPredicted RBP21.66■■□□□ 1.06
SNCA-203ENST00000394986 KIF4AO95239 1232 aa21.66■■□□□ 1.06
SNCA-203ENST00000394986 SMC2O95347 1197 aa21.66■■□□□ 1.06
SNCA-203ENST00000394986 CYP2J2P51589 502 aa21.66■■□□□ 1.06
SNCA-203ENST00000394986 WNT7BP56706 349 aa21.66■■□□□ 1.06
SNCA-203ENST00000394986 UBE3AQ05086 875 aa21.66■■□□□ 1.06
SNCA-203ENST00000394986 HSP90AA2PQ14568 343 aaPredicted RBP21.66■■□□□ 1.06
SNCA-203ENST00000394986 CAMK4Q16566 473 aa21.66■■□□□ 1.06
SNCA-203ENST00000394986 KIF12Q96FN5 646 aa21.66■■□□□ 1.06
SNCA-203ENST00000394986 PLEKHA5Q9HAU0 1116 aa21.66■■□□□ 1.06
SNCA-203ENST00000394986 HSPBP1Q9NZL4 362 aa21.66■■□□□ 1.06
SNCA-203ENST00000394986 LZTS1Q9Y250 596 aa21.66■■□□□ 1.06
SNCA-203ENST00000394986 PRRC2BQ5JSZ5 2229 aaKnown RBP21.66■■□□□ 1.06
SNCA-203ENST00000394986 CLCNKBP51801 687 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms