RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 PLEKHA5Q9HAU0 1116 aa16.4■□□□□ 0.22
IGHV3-53-201ENST00000390627 SLC39A2Q9NP94 309 aa16.4■□□□□ 0.22
IGHV3-53-201ENST00000390627 SLC38A7Q9NVC3 462 aa16.4■□□□□ 0.22
IGHV3-53-201ENST00000390627 CNTN3Q9P232 1028 aa16.4■□□□□ 0.22
IGHV3-53-201ENST00000390627 STK39Q9UEW8 545 aa16.4■□□□□ 0.22
IGHV3-53-201ENST00000390627 AGO2Q9UKV8 859 aaKnown RBP16.4■□□□□ 0.22
IGHV3-53-201ENST00000390627 TISP43B9A030 160 aa16.39■□□□□ 0.21
IGHV3-53-201ENST00000390627 NT5C1B-RDH14C9J2C7 533 aa16.39■□□□□ 0.21
IGHV3-53-201ENST00000390627 NRP1O14786 923 aa16.39■□□□□ 0.21
IGHV3-53-201ENST00000390627 FAM189A1O60320 539 aa16.39■□□□□ 0.21
IGHV3-53-201ENST00000390627 B4GALT3O60512 393 aa16.39■□□□□ 0.21
IGHV3-53-201ENST00000390627 SLC34A2O95436 690 aa16.39■□□□□ 0.21
IGHV3-53-201ENST00000390627 CXCL8P10145 99 aa16.39■□□□□ 0.21
IGHV3-53-201ENST00000390627 PPP2R3AQ06190 1150 aa16.39■□□□□ 0.21
IGHV3-53-201ENST00000390627 BMT2Q1RMZ1 405 aa16.39■□□□□ 0.21
IGHV3-53-201ENST00000390627 SEZ6Q53EL9 994 aa16.39■□□□□ 0.21
IGHV3-53-201ENST00000390627 GLRA4Q5JXX5 417 aa16.39■□□□□ 0.21
IGHV3-53-201ENST00000390627 ARMCX5Q6P1M9 558 aa16.39■□□□□ 0.21
IGHV3-53-201ENST00000390627 ALKAL1Q6UXT8 129 aa16.39■□□□□ 0.21
IGHV3-53-201ENST00000390627 SCFD1Q8WVM8 642 aa16.39■□□□□ 0.21
IGHV3-53-201ENST00000390627 IGSF21Q96ID5 467 aa16.39■□□□□ 0.21
IGHV3-53-201ENST00000390627 COLEC11Q9BWP8 271 aa16.39■□□□□ 0.21
IGHV3-53-201ENST00000390627 TLR9Q9NR96 1032 aa16.39■□□□□ 0.21
IGHV3-53-201ENST00000390627 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.39■□□□□ 0.21
IGHV3-53-201ENST00000390627 CITO14578 2027 aa16.39■□□□□ 0.21
IGHV3-53-201ENST00000390627 SMIM28A0A1B0GU29 152 aa16.38■□□□□ 0.21
IGHV3-53-201ENST00000390627 KIAA0391O15091 583 aaKnown RBP16.38■□□□□ 0.21
IGHV3-53-201ENST00000390627 PRPF40AO75400 957 aaKnown RBP16.38■□□□□ 0.21
IGHV3-53-201ENST00000390627 RHOBTB3O94955 611 aa16.38■□□□□ 0.21
IGHV3-53-201ENST00000390627 KIF20AO95235 890 aa16.38■□□□□ 0.21
IGHV3-53-201ENST00000390627 LDHAP00338 332 aaKnown RBP16.38■□□□□ 0.21
IGHV3-53-201ENST00000390627 KCNE1P15382 129 aa16.38■□□□□ 0.21
IGHV3-53-201ENST00000390627 ADSSP30520 456 aa16.38■□□□□ 0.21
IGHV3-53-201ENST00000390627 TNFSF9P41273 254 aa16.38■□□□□ 0.21
IGHV3-53-201ENST00000390627 SNRPFP62306 86 aaKnown RBP16.38■□□□□ 0.21
IGHV3-53-201ENST00000390627 POU5F1Q01860 360 aaKnown RBP16.38■□□□□ 0.21
IGHV3-53-201ENST00000390627 BMS1Q14692 1282 aaKnown RBP16.38■□□□□ 0.21
IGHV3-53-201ENST00000390627 KCNB1Q14721 858 aa16.38■□□□□ 0.21
IGHV3-53-201ENST00000390627 SLC10A6Q3KNW5 377 aa16.38■□□□□ 0.21
IGHV3-53-201ENST00000390627 PDE12Q6L8Q7 609 aaKnown RBP16.38■□□□□ 0.21
IGHV3-53-201ENST00000390627 HS2ST1Q7LGA3 356 aa16.38■□□□□ 0.21
IGHV3-53-201ENST00000390627 ELOA2Q8IYF1 753 aaPredicted RBP16.38■□□□□ 0.21
IGHV3-53-201ENST00000390627 KIAA0895Q8NCT3 520 aa16.38■□□□□ 0.21
IGHV3-53-201ENST00000390627 PPP2R3CQ969Q6 453 aa16.38■□□□□ 0.21
IGHV3-53-201ENST00000390627 PPP1R10Q96QC0 940 aaKnown RBP16.38■□□□□ 0.21
IGHV3-53-201ENST00000390627 TSPAN18Q96SJ8 248 aa16.38■□□□□ 0.21
IGHV3-53-201ENST00000390627 IKZF4Q9H2S9 585 aa16.38■□□□□ 0.21
IGHV3-53-201ENST00000390627 NSUN3Q9H649 340 aaKnown RBP16.38■□□□□ 0.21
IGHV3-53-201ENST00000390627 RMND1Q9NWS8 449 aa16.38■□□□□ 0.21
IGHV3-53-201ENST00000390627 CPSF3Q9UKF6 684 aaKnown RBP16.38■□□□□ 0.21
IGHV3-53-201ENST00000390627 PRG3Q9Y2Y8 225 aaPredicted RBP16.38■□□□□ 0.21
IGHV3-53-201ENST00000390627 PLXNA4Q9HCM2 1894 aa16.37■□□□□ 0.21
IGHV3-53-201ENST00000390627 TTC26A0AVF1 554 aa16.37■□□□□ 0.21
IGHV3-53-201ENST00000390627 CASTOR2A6NHX0 329 aa16.37■□□□□ 0.21
IGHV3-53-201ENST00000390627 CSPG5O95196 566 aa16.37■□□□□ 0.21
IGHV3-53-201ENST00000390627 SMC2O95347 1197 aa16.37■□□□□ 0.21
IGHV3-53-201ENST00000390627 DNAJB1P25685 340 aa16.37■□□□□ 0.21
IGHV3-53-201ENST00000390627 ACOT2P49753 483 aa16.37■□□□□ 0.21
IGHV3-53-201ENST00000390627 STK4Q13043 487 aa16.37■□□□□ 0.21
IGHV3-53-201ENST00000390627 PNOCQ13519 176 aa16.37■□□□□ 0.21
IGHV3-53-201ENST00000390627 ENOX2Q16206 610 aaKnown RBP16.37■□□□□ 0.21
IGHV3-53-201ENST00000390627 ZBTB41Q5SVQ8 909 aa16.37■□□□□ 0.21
IGHV3-53-201ENST00000390627 DDX53Q86TM3 631 aaKnown RBP16.37■□□□□ 0.21
IGHV3-53-201ENST00000390627 TMEM173Q86WV6 379 aaPredicted RBP16.37■□□□□ 0.21
IGHV3-53-201ENST00000390627 CD302Q8IX05 232 aa16.37■□□□□ 0.21
IGHV3-53-201ENST00000390627 NELFCDQ8IXH7 590 aa16.37■□□□□ 0.21
IGHV3-53-201ENST00000390627 UROC1Q96N76 676 aa16.37■□□□□ 0.21
IGHV3-53-201ENST00000390627 CBWD1Q9BRT8 395 aa16.37■□□□□ 0.21
IGHV3-53-201ENST00000390627 CXCL16Q9H2A7 254 aa16.37■□□□□ 0.21
IGHV3-53-201ENST00000390627 ENTPD7Q9NQZ7 604 aa16.37■□□□□ 0.21
IGHV3-53-201ENST00000390627 CGNQ9P2M7 1197 aaKnown RBP16.37■□□□□ 0.21
IGHV3-53-201ENST00000390627 PRRC2BQ5JSZ5 2229 aaKnown RBP16.37■□□□□ 0.21
IGHV3-53-201ENST00000390627 XPOTO43592 962 aaKnown RBP16.36■□□□□ 0.21
IGHV3-53-201ENST00000390627 HOXD13P35453 343 aa16.36■□□□□ 0.21
IGHV3-53-201ENST00000390627 CAMK1Q14012 370 aa16.36■□□□□ 0.21
IGHV3-53-201ENST00000390627 HSP90AA2PQ14568 343 aaPredicted RBP16.36■□□□□ 0.21
IGHV3-53-201ENST00000390627 NAB2Q15742 525 aa16.36■□□□□ 0.21
IGHV3-53-201ENST00000390627 KNOP1Q1ED39 458 aaKnown RBP16.36■□□□□ 0.21
IGHV3-53-201ENST00000390627 GOLGA5Q8TBA6 731 aa16.36■□□□□ 0.21
IGHV3-53-201ENST00000390627 MICAL1Q8TDZ2 1067 aa16.36■□□□□ 0.21
IGHV3-53-201ENST00000390627 BCL7CQ8WUZ0 217 aaPredicted RBP16.36■□□□□ 0.21
IGHV3-53-201ENST00000390627 PPM1EQ8WY54 764 aa16.36■□□□□ 0.21
IGHV3-53-201ENST00000390627 SMARCE1Q969G3 411 aa16.36■□□□□ 0.21
IGHV3-53-201ENST00000390627 ZMAT2Q96NC0 199 aaKnown RBP16.36■□□□□ 0.21
IGHV3-53-201ENST00000390627 GSDMAQ96QA5 445 aa16.36■□□□□ 0.21
IGHV3-53-201ENST00000390627 TCF25Q9BQ70 676 aa16.36■□□□□ 0.21
IGHV3-53-201ENST00000390627 FAM213AQ9BRX8 229 aa16.36■□□□□ 0.21
IGHV3-53-201ENST00000390627 NGRNQ9NPE2 291 aaKnown RBP16.36■□□□□ 0.21
IGHV3-53-201ENST00000390627 AGPAT3Q9NRZ7 376 aa16.36■□□□□ 0.21
IGHV3-53-201ENST00000390627 MARCH5Q9NX47 278 aa16.36■□□□□ 0.21
IGHV3-53-201ENST00000390627 GOLGA6L22H0YM25 854 aa16.35■□□□□ 0.21
IGHV3-53-201ENST00000390627 FSCN2O14926 492 aa16.35■□□□□ 0.21
IGHV3-53-201ENST00000390627 MEFVO15553 781 aaPredicted RBP16.35■□□□□ 0.21
IGHV3-53-201ENST00000390627 EXTL3O43909 919 aa16.35■□□□□ 0.21
IGHV3-53-201ENST00000390627 ADRB2P07550 413 aa16.35■□□□□ 0.21
IGHV3-53-201ENST00000390627 IRS1P35568 1242 aa16.35■□□□□ 0.21
IGHV3-53-201ENST00000390627 CCDC85BQ15834 202 aaPredicted RBP16.35■□□□□ 0.21
IGHV3-53-201ENST00000390627 TMC7Q7Z402 723 aa16.35■□□□□ 0.21
IGHV3-53-201ENST00000390627 VPS52Q8N1B4 723 aa16.35■□□□□ 0.21
IGHV3-53-201ENST00000390627 GPD1LQ8N335 351 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms