RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 CALR3Q96L12 384 aaKnown RBP18.17■□□□□ 0.5
SGCB-201ENST00000381431 FAM167BQ9BTA0 163 aa18.17■□□□□ 0.5
SGCB-201ENST00000381431 TARS2Q9BW92 718 aaKnown RBP18.17■□□□□ 0.5
SGCB-201ENST00000381431 RTFDC1Q9BY42 306 aaPredicted RBP18.17■□□□□ 0.5
SGCB-201ENST00000381431 VCX3AQ9NNX9 186 aa18.17■□□□□ 0.5
SGCB-201ENST00000381431 CPSF3Q9UKF6 684 aaKnown RBP18.17■□□□□ 0.5
SGCB-201ENST00000381431 AGLP35573 1532 aa18.17■□□□□ 0.5
SGCB-201ENST00000381431 HUS1O60921 280 aa18.17■□□□□ 0.5
SGCB-201ENST00000381431 CDH16O75309 829 aa18.17■□□□□ 0.5
SGCB-201ENST00000381431 TAL1P17542 331 aaPredicted RBP18.17■□□□□ 0.5
SGCB-201ENST00000381431 RPS6P62753 249 aaKnown RBP18.17■□□□□ 0.5
SGCB-201ENST00000381431 CDR2LQ86X02 465 aaPredicted RBP18.17■□□□□ 0.5
SGCB-201ENST00000381431 FAM151AQ8WW52 585 aa18.17■□□□□ 0.5
SGCB-201ENST00000381431 RIT2Q99578 217 aa18.17■□□□□ 0.5
SGCB-201ENST00000381431 ISCUQ9H1K1 167 aa18.17■□□□□ 0.5
SGCB-201ENST00000381431 TRABDQ9H4I3 376 aa18.17■□□□□ 0.5
SGCB-201ENST00000381431 KLC4Q9NSK0 619 aa18.17■□□□□ 0.5
SGCB-201ENST00000381431 MAP3K7O43318 606 aa18.16■□□□□ 0.5
SGCB-201ENST00000381431 LPXNO60711 386 aa18.16■□□□□ 0.5
SGCB-201ENST00000381431 AKAP3O75969 853 aa18.16■□□□□ 0.5
SGCB-201ENST00000381431 HLA-DRAP01903 254 aa18.16■□□□□ 0.5
SGCB-201ENST00000381431 HSPA9P38646 679 aaKnown RBP18.16■□□□□ 0.5
SGCB-201ENST00000381431 ARL13BQ3SXY8 428 aa18.16■□□□□ 0.5
SGCB-201ENST00000381431 HEATR6Q6AI08 1181 aaKnown RBP18.16■□□□□ 0.5
SGCB-201ENST00000381431 BBS5Q8N3I7 341 aa18.16■□□□□ 0.5
SGCB-201ENST00000381431 KIAA0895Q8NCT3 520 aa18.16■□□□□ 0.5
SGCB-201ENST00000381431 TRAIPQ9BWF2 469 aa18.16■□□□□ 0.5
SGCB-201ENST00000381431 ECT2Q9H8V3 914 aa18.16■□□□□ 0.5
SGCB-201ENST00000381431 CNTNAP4Q9C0A0 1308 aa18.16■□□□□ 0.5
SGCB-201ENST00000381431 A8MXQ7 604 aa18.16■□□□□ 0.5
SGCB-201ENST00000381431 WDR46O15213 610 aaKnown RBP18.16■□□□□ 0.5
SGCB-201ENST00000381431 CSPG5O95196 566 aa18.16■□□□□ 0.5
SGCB-201ENST00000381431 POLE2P56282 527 aa18.16■□□□□ 0.5
SGCB-201ENST00000381431 EIF3EP60228 445 aaKnown RBP18.16■□□□□ 0.5
SGCB-201ENST00000381431 NOP14P78316 857 aaKnown RBP18.16■□□□□ 0.5
SGCB-201ENST00000381431 SLC10A5Q5PT55 438 aa18.16■□□□□ 0.5
SGCB-201ENST00000381431 WDR93Q6P2C0 686 aa18.16■□□□□ 0.5
SGCB-201ENST00000381431 SCFD1Q8WVM8 642 aa18.16■□□□□ 0.5
SGCB-201ENST00000381431 PRMT6Q96LA8 375 aaPredicted RBP18.16■□□□□ 0.5
SGCB-201ENST00000381431 XPO6Q96QU8 1125 aaKnown RBP18.16■□□□□ 0.5
SGCB-201ENST00000381431 KLF6Q99612 283 aaPredicted RBP18.16■□□□□ 0.5
SGCB-201ENST00000381431 NUDT12Q9BQG2 462 aa18.16■□□□□ 0.5
SGCB-201ENST00000381431 C2orf40Q9H1Z8 148 aa18.16■□□□□ 0.5
SGCB-201ENST00000381431 SCOCQ9UIL1 159 aa18.16■□□□□ 0.5
SGCB-201ENST00000381431 AGTP01019 485 aa18.16■□□□□ 0.5
SGCB-201ENST00000381431 RGS7P49802 495 aa18.16■□□□□ 0.5
SGCB-201ENST00000381431 CASKIN2Q8WXE0 1202 aa18.16■□□□□ 0.5
SGCB-201ENST00000381431 SYN2Q92777 582 aaPredicted RBP18.16■□□□□ 0.5
SGCB-201ENST00000381431 PCDHB2Q9Y5E7 798 aa18.16■□□□□ 0.5
SGCB-201ENST00000381431 PFDN6O15212 129 aa18.16■□□□□ 0.5
SGCB-201ENST00000381431 MYCP01106 439 aaPredicted RBP18.16■□□□□ 0.5
SGCB-201ENST00000381431 PRKCBP05771 671 aa18.16■□□□□ 0.5
SGCB-201ENST00000381431 BMP6P22004 513 aa18.16■□□□□ 0.5
SGCB-201ENST00000381431 PDE1CQ14123 709 aaPredicted RBP18.16■□□□□ 0.5
SGCB-201ENST00000381431 PAPD7Q5XG87 772 aaKnown RBP18.16■□□□□ 0.5
SGCB-201ENST00000381431 MTMR8Q96EF0 704 aa18.16■□□□□ 0.5
SGCB-201ENST00000381431 KIF12Q96FN5 646 aa18.16■□□□□ 0.5
SGCB-201ENST00000381431 MCEEQ96PE7 176 aa18.16■□□□□ 0.5
SGCB-201ENST00000381431 APOBEC2Q9Y235 224 aaKnown RBP18.16■□□□□ 0.5
SGCB-201ENST00000381431 GRAP2O75791 330 aa18.15■□□□□ 0.5
SGCB-201ENST00000381431 WEE2P0C1S8 567 aa18.15■□□□□ 0.5
SGCB-201ENST00000381431 FDX1P10109 184 aa18.15■□□□□ 0.5
SGCB-201ENST00000381431 HSD17B3P37058 310 aa18.15■□□□□ 0.5
SGCB-201ENST00000381431 ROR1Q01973 937 aa18.15■□□□□ 0.5
SGCB-201ENST00000381431 TNFAIP2Q03169 654 aa18.15■□□□□ 0.5
SGCB-201ENST00000381431 TTLL4Q14679 1199 aa18.15■□□□□ 0.5
SGCB-201ENST00000381431 STAT4Q14765 748 aa18.15■□□□□ 0.5
SGCB-201ENST00000381431 FIGNQ5HY92 759 aa18.15■□□□□ 0.5
SGCB-201ENST00000381431 NUDCD3Q8IVD9 361 aa18.15■□□□□ 0.5
SGCB-201ENST00000381431 PDZD8Q8NEN9 1154 aa18.15■□□□□ 0.5
SGCB-201ENST00000381431 PIP4K2CQ8TBX8 421 aa18.15■□□□□ 0.5
SGCB-201ENST00000381431 BTBD6Q96KE9 485 aa18.15■□□□□ 0.5
SGCB-201ENST00000381431 CYP26B1Q9NR63 512 aa18.15■□□□□ 0.5
SGCB-201ENST00000381431 SUCLA2Q9P2R7 463 aaPredicted RBP18.15■□□□□ 0.5
SGCB-201ENST00000381431 EPS15L1Q9UBC2 864 aa18.15■□□□□ 0.5
SGCB-201ENST00000381431 SPATA31A5Q5VU36 1347 aa18.15■□□□□ 0.5
SGCB-201ENST00000381431 SPATA31A7Q8IWB4 1347 aa18.15■□□□□ 0.5
SGCB-201ENST00000381431 APRTP07741 180 aa18.15■□□□□ 0.5
SGCB-201ENST00000381431 PSMC6P62333 389 aa18.15■□□□□ 0.5
SGCB-201ENST00000381431 PRKCEQ02156 737 aa18.15■□□□□ 0.5
SGCB-201ENST00000381431 LRRC43Q8N309 656 aa18.15■□□□□ 0.5
SGCB-201ENST00000381431 RUBCNQ92622 972 aa18.15■□□□□ 0.5
SGCB-201ENST00000381431 ATXN7L3BQ96GX2 97 aa18.15■□□□□ 0.5
SGCB-201ENST00000381431 CBWD1Q9BRT8 395 aa18.15■□□□□ 0.5
SGCB-201ENST00000381431 SPECC1L-ADORA2AF8WAN1 911 aa18.15■□□□□ 0.5
SGCB-201ENST00000381431 PDHA1P08559 390 aa18.15■□□□□ 0.5
SGCB-201ENST00000381431 SLC1A1P43005 524 aa18.15■□□□□ 0.5
SGCB-201ENST00000381431 OCRLQ01968 901 aa18.15■□□□□ 0.5
SGCB-201ENST00000381431 SPATA21Q7Z572 469 aa18.15■□□□□ 0.5
SGCB-201ENST00000381431 CCNYL1Q8N7R7 359 aa18.15■□□□□ 0.5
SGCB-201ENST00000381431 LPAR1Q92633 364 aa18.15■□□□□ 0.5
SGCB-201ENST00000381431 TAAR1Q96RJ0 339 aa18.15■□□□□ 0.5
SGCB-201ENST00000381431 TTC1Q99614 292 aa18.15■□□□□ 0.5
SGCB-201ENST00000381431 OSGEPQ9NPF4 335 aa18.15■□□□□ 0.5
SGCB-201ENST00000381431 DIAPH2O60879 1101 aa18.14■□□□□ 0.5
SGCB-201ENST00000381431 GIT2Q14161 759 aa18.14■□□□□ 0.5
SGCB-201ENST00000381431 PLCB4Q15147 1175 aa18.14■□□□□ 0.5
SGCB-201ENST00000381431 SEZ6Q53EL9 994 aa18.14■□□□□ 0.5
SGCB-201ENST00000381431 CBWD2Q8IUF1 395 aa18.14■□□□□ 0.5
SGCB-201ENST00000381431 PARP9Q8IXQ6 854 aa18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms