RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 TMEM206Q9H813 350 aa17.65■□□□□ 0.42
SNRPB-201ENST00000381342 PUF60Q9UHX1 559 aaKnown RBP17.65■□□□□ 0.42
SNRPB-201ENST00000381342 OGTO15294 1046 aa17.64■□□□□ 0.41
SNRPB-201ENST00000381342 INPPL1O15357 1258 aa17.64■□□□□ 0.41
SNRPB-201ENST00000381342 MEFVO15553 781 aaPredicted RBP17.64■□□□□ 0.41
SNRPB-201ENST00000381342 ZC3H11AO75152 810 aaKnown RBP eCLIP17.64■□□□□ 0.41
SNRPB-201ENST00000381342 ADSSP30520 456 aa17.64■□□□□ 0.41
SNRPB-201ENST00000381342 TNFSF9P41273 254 aa17.64■□□□□ 0.41
SNRPB-201ENST00000381342 UBE3AQ05086 875 aa17.64■□□□□ 0.41
SNRPB-201ENST00000381342 PSMD2Q13200 908 aa17.64■□□□□ 0.41
SNRPB-201ENST00000381342 BMT2Q1RMZ1 405 aa17.64■□□□□ 0.41
SNRPB-201ENST00000381342 COLGALT1Q8NBJ5 622 aa17.64■□□□□ 0.41
SNRPB-201ENST00000381342 SPPL3Q8TCT6 385 aa17.64■□□□□ 0.41
SNRPB-201ENST00000381342 POF1BQ8WVV4 589 aa17.64■□□□□ 0.41
SNRPB-201ENST00000381342 POMGNT1Q8WZA1 660 aa17.64■□□□□ 0.41
SNRPB-201ENST00000381342 SMARCE1Q969G3 411 aa17.64■□□□□ 0.41
SNRPB-201ENST00000381342 SNX27Q96L92 541 aa17.64■□□□□ 0.41
SNRPB-201ENST00000381342 MIOSQ9NXC5 875 aa17.64■□□□□ 0.41
SNRPB-201ENST00000381342 FAM50BQ9Y247 325 aa17.64■□□□□ 0.41
SNRPB-201ENST00000381342 PCDHA5Q9Y5H7 936 aa17.64■□□□□ 0.41
SNRPB-201ENST00000381342 STYXL1Q9Y6J8 313 aa17.64■□□□□ 0.41
SNRPB-201ENST00000381342 CARNS1A5YM72 827 aa17.63■□□□□ 0.41
SNRPB-201ENST00000381342 TNFRSF10AO00220 468 aa17.63■□□□□ 0.41
SNRPB-201ENST00000381342 PTGESO14684 152 aa17.63■□□□□ 0.41
SNRPB-201ENST00000381342 SMC2O95347 1197 aa17.63■□□□□ 0.41
SNRPB-201ENST00000381342 ITGB1P05556 798 aa17.63■□□□□ 0.41
SNRPB-201ENST00000381342 CXCL8P10145 99 aa17.63■□□□□ 0.41
SNRPB-201ENST00000381342 BMP1P13497 986 aa17.63■□□□□ 0.41
SNRPB-201ENST00000381342 KCNA5P22460 613 aa17.63■□□□□ 0.41
SNRPB-201ENST00000381342 YARSP54577 528 aaKnown RBP17.63■□□□□ 0.41
SNRPB-201ENST00000381342 KRT17Q04695 432 aa17.63■□□□□ 0.41
SNRPB-201ENST00000381342 PUS10Q3MIT2 529 aaKnown RBP17.63■□□□□ 0.41
SNRPB-201ENST00000381342 GLRA4Q5JXX5 417 aa17.63■□□□□ 0.41
SNRPB-201ENST00000381342 ARMCX5Q6P1M9 558 aa17.63■□□□□ 0.41
SNRPB-201ENST00000381342 ZNF280BQ86YH2 543 aa17.63■□□□□ 0.41
SNRPB-201ENST00000381342 ELOA2Q8IYF1 753 aaPredicted RBP17.63■□□□□ 0.41
SNRPB-201ENST00000381342 SMYD4Q8IYR2 804 aaPredicted RBP17.63■□□□□ 0.41
SNRPB-201ENST00000381342 GSTCDQ8NEC7 633 aa17.63■□□□□ 0.41
SNRPB-201ENST00000381342 SPATA20Q8TB22 786 aa17.63■□□□□ 0.41
SNRPB-201ENST00000381342 PABPC5Q96DU9 382 aaKnown RBP17.63■□□□□ 0.41
SNRPB-201ENST00000381342 SAAL1Q96ER3 474 aa17.63■□□□□ 0.41
SNRPB-201ENST00000381342 CBWD1Q9BRT8 395 aa17.63■□□□□ 0.41
SNRPB-201ENST00000381342 IGFLR1Q9H665 355 aa17.63■□□□□ 0.41
SNRPB-201ENST00000381342 NRDE2Q9H7Z3 1164 aa17.63■□□□□ 0.41
SNRPB-201ENST00000381342 CLDND1Q9NY35 253 aa17.63■□□□□ 0.41
SNRPB-201ENST00000381342 DNAJB4Q9UDY4 337 aa17.63■□□□□ 0.41
SNRPB-201ENST00000381342 AGO2Q9UKV8 859 aaKnown RBP17.63■□□□□ 0.41
SNRPB-201ENST00000381342 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.62■□□□□ 0.41
SNRPB-201ENST00000381342 TGFB1I1O43294 461 aa17.62■□□□□ 0.41
SNRPB-201ENST00000381342 DDHD2O94830 711 aa17.62■□□□□ 0.41
SNRPB-201ENST00000381342 PPM1AP35813 382 aa17.62■□□□□ 0.41
SNRPB-201ENST00000381342 ACOT2P49753 483 aa17.62■□□□□ 0.41
SNRPB-201ENST00000381342 KCNQ1P51787 676 aa17.62■□□□□ 0.41
SNRPB-201ENST00000381342 GRIK3Q13003 919 aa17.62■□□□□ 0.41
SNRPB-201ENST00000381342 BMS1Q14692 1282 aaKnown RBP17.62■□□□□ 0.41
SNRPB-201ENST00000381342 CAMK4Q16566 473 aa17.62■□□□□ 0.41
SNRPB-201ENST00000381342 SLFN12LQ6IEE8 588 aa17.62■□□□□ 0.41
SNRPB-201ENST00000381342 ZSWIM2Q8NEG5 633 aa17.62■□□□□ 0.41
SNRPB-201ENST00000381342 GPT2Q8TD30 523 aa17.62■□□□□ 0.41
SNRPB-201ENST00000381342 ZNF558Q96NG5 402 aa17.62■□□□□ 0.41
SNRPB-201ENST00000381342 ACAP3Q96P50 834 aa17.62■□□□□ 0.41
SNRPB-201ENST00000381342 GSDMAQ96QA5 445 aa17.62■□□□□ 0.41
SNRPB-201ENST00000381342 PCIF1Q9H4Z3 704 aa17.62■□□□□ 0.41
SNRPB-201ENST00000381342 AGPAT3Q9NRZ7 376 aa17.62■□□□□ 0.41
SNRPB-201ENST00000381342 TOPORSQ9NS56 1045 aaPredicted RBP17.62■□□□□ 0.41
SNRPB-201ENST00000381342 RMND1Q9NWS8 449 aa17.62■□□□□ 0.41
SNRPB-201ENST00000381342 MAPK8IP1Q9UQF2 711 aa17.62■□□□□ 0.41
SNRPB-201ENST00000381342 FGF18O76093 207 aa17.61■□□□□ 0.41
SNRPB-201ENST00000381342 CLTAP09496 248 aa17.61■□□□□ 0.41
SNRPB-201ENST00000381342 GARTP22102 1010 aa17.61■□□□□ 0.41
SNRPB-201ENST00000381342 BCAR1P56945 870 aa17.61■□□□□ 0.41
SNRPB-201ENST00000381342 ENOX2Q16206 610 aaKnown RBP17.61■□□□□ 0.41
SNRPB-201ENST00000381342 KNOP1Q1ED39 458 aaKnown RBP17.61■□□□□ 0.41
SNRPB-201ENST00000381342 SLC10A6Q3KNW5 377 aa17.61■□□□□ 0.41
SNRPB-201ENST00000381342 LEXMQ3ZCV2 418 aa17.61■□□□□ 0.41
SNRPB-201ENST00000381342 PDE12Q6L8Q7 609 aaKnown RBP17.61■□□□□ 0.41
SNRPB-201ENST00000381342 KCNT2Q6UVM3 1135 aa17.61■□□□□ 0.41
SNRPB-201ENST00000381342 NOC3LQ8WTT2 800 aaKnown RBP17.61■□□□□ 0.41
SNRPB-201ENST00000381342 FAM193BQ96PV7 902 aaPredicted RBP17.61■□□□□ 0.41
SNRPB-201ENST00000381342 CLSTN2Q9H4D0 955 aa17.61■□□□□ 0.41
SNRPB-201ENST00000381342 KANSL3Q9P2N6 904 aa17.61■□□□□ 0.41
SNRPB-201ENST00000381342 CACNG4Q9UBN1 327 aa17.61■□□□□ 0.41
SNRPB-201ENST00000381342 CPSF3Q9UKF6 684 aaKnown RBP17.61■□□□□ 0.41
SNRPB-201ENST00000381342 MAN1B1Q9UKM7 699 aa17.61■□□□□ 0.41
SNRPB-201ENST00000381342 GOLGA8IPA6NC78 632 aa17.6■□□□□ 0.41
SNRPB-201ENST00000381342 GOLGA8JA6NMD2 632 aa17.6■□□□□ 0.41
SNRPB-201ENST00000381342 NT5C1B-RDH14C9J2C7 533 aa17.6■□□□□ 0.41
SNRPB-201ENST00000381342 SLC11A1P49279 550 aa17.6■□□□□ 0.41
SNRPB-201ENST00000381342 ALDH7A1P49419 539 aaKnown RBP17.6■□□□□ 0.41
SNRPB-201ENST00000381342 DSC1Q08554 894 aa17.6■□□□□ 0.41
SNRPB-201ENST00000381342 KYAT1Q16773 422 aa17.6■□□□□ 0.41
SNRPB-201ENST00000381342 ISM2Q6H9L7 571 aa17.6■□□□□ 0.41
SNRPB-201ENST00000381342 ZMAT2Q96NC0 199 aaKnown RBP17.6■□□□□ 0.41
SNRPB-201ENST00000381342 FAM213AQ9BRX8 229 aa17.6■□□□□ 0.41
SNRPB-201ENST00000381342 KCTD10Q9H3F6 313 aa17.6■□□□□ 0.41
SNRPB-201ENST00000381342 TLR9Q9NR96 1032 aa17.6■□□□□ 0.41
SNRPB-201ENST00000381342 SPG21Q9NZD8 308 aa17.6■□□□□ 0.41
SNRPB-201ENST00000381342 CNTN3Q9P232 1028 aa17.6■□□□□ 0.41
SNRPB-201ENST00000381342 FSD2A1L4K1 749 aa17.59■□□□□ 0.41
SNRPB-201ENST00000381342 BIN1O00499 593 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms