RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 SLC47A2Q86VL8 602 aa21.39■■□□□ 1.02
PDLIM5-205ENST00000380180 IFT122Q9HBG6 1241 aa21.39■■□□□ 1.02
PDLIM5-205ENST00000380180 ACP6Q9NPH0 428 aa21.39■■□□□ 1.02
PDLIM5-205ENST00000380180 FLRT1Q9NZU1 646 aa21.39■■□□□ 1.02
PDLIM5-205ENST00000380180 HYOU1Q9Y4L1 999 aa21.39■■□□□ 1.02
PDLIM5-205ENST00000380180 FTCDO95954 541 aa21.39■■□□□ 1.01
PDLIM5-205ENST00000380180 PROZP22891 400 aa21.39■■□□□ 1.01
PDLIM5-205ENST00000380180 PIK3CAP42336 1068 aa21.39■■□□□ 1.01
PDLIM5-205ENST00000380180 WDR44Q5JSH3 913 aa21.39■■□□□ 1.01
PDLIM5-205ENST00000380180 ATF7IP2Q5U623 682 aa21.39■■□□□ 1.01
PDLIM5-205ENST00000380180 MTHFD1LQ6UB35 978 aa21.39■■□□□ 1.01
PDLIM5-205ENST00000380180 NOP9Q86U38 636 aaKnown RBP21.39■■□□□ 1.01
PDLIM5-205ENST00000380180 CREG2Q8IUH2 290 aa21.39■■□□□ 1.01
PDLIM5-205ENST00000380180 BRSK2Q8IWQ3 736 aa21.39■■□□□ 1.01
PDLIM5-205ENST00000380180 RPUSD2Q8IZ73 545 aaKnown RBP21.39■■□□□ 1.01
PDLIM5-205ENST00000380180 OR5B17Q8NGF7 314 aa21.39■■□□□ 1.01
PDLIM5-205ENST00000380180 EPS8L1Q8TE68 723 aa21.39■■□□□ 1.01
PDLIM5-205ENST00000380180 COG1Q8WTW3 980 aa21.39■■□□□ 1.01
PDLIM5-205ENST00000380180 DHX38Q92620 1227 aaKnown RBP21.39■■□□□ 1.01
PDLIM5-205ENST00000380180 PSMB7Q99436 277 aa21.39■■□□□ 1.01
PDLIM5-205ENST00000380180 NFKBIZQ9BYH8 718 aa21.39■■□□□ 1.01
PDLIM5-205ENST00000380180 PTPRHQ9HD43 1115 aa21.39■■□□□ 1.01
PDLIM5-205ENST00000380180 C1orf112Q9NSG2 853 aa21.39■■□□□ 1.01
PDLIM5-205ENST00000380180 NOCTQ9UK39 431 aaKnown RBP21.39■■□□□ 1.01
PDLIM5-205ENST00000380180 A0A0A6YYK5 440 aaPredicted RBP21.38■■□□□ 1.01
PDLIM5-205ENST00000380180 PDE2AO00408 941 aaPredicted RBP21.38■■□□□ 1.01
PDLIM5-205ENST00000380180 TCP1P17987 556 aaKnown RBP21.38■■□□□ 1.01
PDLIM5-205ENST00000380180 CXCR5P32302 372 aa21.38■■□□□ 1.01
PDLIM5-205ENST00000380180 POU5F1BQ06416 359 aa21.38■■□□□ 1.01
PDLIM5-205ENST00000380180 CKAP4Q07065 602 aaKnown RBP21.38■■□□□ 1.01
PDLIM5-205ENST00000380180 IFI16Q16666 785 aaKnown RBP21.38■■□□□ 1.01
PDLIM5-205ENST00000380180 AKT3Q9Y243 479 aa21.38■■□□□ 1.01
PDLIM5-205ENST00000380180 A0A087WZ62 844 aa21.38■■□□□ 1.01
PDLIM5-205ENST00000380180 FAM170AA1A519 330 aa21.38■■□□□ 1.01
PDLIM5-205ENST00000380180 SLC10A3P09131 477 aa21.38■■□□□ 1.01
PDLIM5-205ENST00000380180 CHRNB2P17787 502 aa21.38■■□□□ 1.01
PDLIM5-205ENST00000380180 MEI1Q5TIA1 1274 aa21.38■■□□□ 1.01
PDLIM5-205ENST00000380180 MPZL3Q6UWV2 235 aa21.38■■□□□ 1.01
PDLIM5-205ENST00000380180 ENOSF1Q7L5Y1 443 aa21.38■■□□□ 1.01
PDLIM5-205ENST00000380180 NOA1Q8NC60 698 aaKnown RBP21.38■■□□□ 1.01
PDLIM5-205ENST00000380180 PPP1R16BQ96T49 567 aa21.38■■□□□ 1.01
PDLIM5-205ENST00000380180 FDXACB1Q9BRP7 624 aaPredicted RBP21.38■■□□□ 1.01
PDLIM5-205ENST00000380180 PARD6BQ9BYG5 372 aa21.38■■□□□ 1.01
PDLIM5-205ENST00000380180 TSKSQ9UJT2 592 aa21.38■■□□□ 1.01
PDLIM5-205ENST00000380180 CPSF3Q9UKF6 684 aaKnown RBP21.38■■□□□ 1.01
PDLIM5-205ENST00000380180 DYNC1LI2O43237 492 aaPredicted RBP21.37■■□□□ 1.01
PDLIM5-205ENST00000380180 VTNP04004 478 aa21.37■■□□□ 1.01
PDLIM5-205ENST00000380180 HOXC6P09630 235 aa21.37■■□□□ 1.01
PDLIM5-205ENST00000380180 TMEM253P0C7T8 217 aa21.37■■□□□ 1.01
PDLIM5-205ENST00000380180 ABCB4P21439 1286 aa21.37■■□□□ 1.01
PDLIM5-205ENST00000380180 TMOD1P28289 359 aa21.37■■□□□ 1.01
PDLIM5-205ENST00000380180 PHKA2P46019 1235 aa21.37■■□□□ 1.01
PDLIM5-205ENST00000380180 INHBEP58166 350 aa21.37■■□□□ 1.01
PDLIM5-205ENST00000380180 PPFIA1Q13136 1202 aa21.37■■□□□ 1.01
PDLIM5-205ENST00000380180 CDR2LQ86X02 465 aaPredicted RBP21.37■■□□□ 1.01
PDLIM5-205ENST00000380180 TPCN2Q8NHX9 752 aa21.37■■□□□ 1.01
PDLIM5-205ENST00000380180 CAGE1Q8TC20 777 aa21.37■■□□□ 1.01
PDLIM5-205ENST00000380180 FAM81BQ96LP2 452 aa21.37■■□□□ 1.01
PDLIM5-205ENST00000380180 ARID3AQ99856 593 aa21.37■■□□□ 1.01
PDLIM5-205ENST00000380180 TRIP12Q14669 1992 aaPredicted RBP21.36■■□□□ 1.01
PDLIM5-205ENST00000380180 CSDE1O75534 798 aaKnown RBP21.36■■□□□ 1.01
PDLIM5-205ENST00000380180 CYP11B1P15538 503 aa21.36■■□□□ 1.01
PDLIM5-205ENST00000380180 GRIK4Q16099 956 aa21.36■■□□□ 1.01
PDLIM5-205ENST00000380180 CCL14Q16627 93 aa21.36■■□□□ 1.01
PDLIM5-205ENST00000380180 TMEM132AQ24JP5 1023 aa21.36■■□□□ 1.01
PDLIM5-205ENST00000380180 MARCH8Q5T0T0 291 aa21.36■■□□□ 1.01
PDLIM5-205ENST00000380180 TAF3Q5VWG9 929 aa21.36■■□□□ 1.01
PDLIM5-205ENST00000380180 EEF1DP3Q658K8 133 aa21.36■■□□□ 1.01
PDLIM5-205ENST00000380180 SPOPLQ6IQ16 392 aa21.36■■□□□ 1.01
PDLIM5-205ENST00000380180 CTNNBL1Q8WYA6 563 aaPredicted RBP21.36■■□□□ 1.01
PDLIM5-205ENST00000380180 USP6NLQ92738 828 aa21.36■■□□□ 1.01
PDLIM5-205ENST00000380180 PCDHB18PQ96TA0 734 aa21.36■■□□□ 1.01
PDLIM5-205ENST00000380180 ANKZF1Q9H8Y5 726 aa21.36■■□□□ 1.01
PDLIM5-205ENST00000380180 PRMT7Q9NVM4 692 aaPredicted RBP21.36■■□□□ 1.01
PDLIM5-205ENST00000380180 PACSIN2Q9UNF0 486 aaPredicted RBP21.36■■□□□ 1.01
PDLIM5-205ENST00000380180 GNEQ9Y223 722 aaKnown RBP21.36■■□□□ 1.01
PDLIM5-205ENST00000380180 ANKRD62A6NC57 917 aa21.36■■□□□ 1.01
PDLIM5-205ENST00000380180 CYP2C19P33261 490 aa21.36■■□□□ 1.01
PDLIM5-205ENST00000380180 GRM1Q13255 1194 aa21.36■■□□□ 1.01
PDLIM5-205ENST00000380180 ZNF568Q3ZCX4 644 aa21.36■■□□□ 1.01
PDLIM5-205ENST00000380180 THNSL1Q8IYQ7 743 aa21.36■■□□□ 1.01
PDLIM5-205ENST00000380180 LRRC57Q8N9N7 239 aa21.36■■□□□ 1.01
PDLIM5-205ENST00000380180 SLC35G2Q8TBE7 412 aa21.36■■□□□ 1.01
PDLIM5-205ENST00000380180 FAM212AQ96EL1 285 aa21.36■■□□□ 1.01
PDLIM5-205ENST00000380180 RPGRIP1Q96KN7 1286 aa21.36■■□□□ 1.01
PDLIM5-205ENST00000380180 THAP2Q9H0W7 228 aa21.36■■□□□ 1.01
PDLIM5-205ENST00000380180 ISCUQ9H1K1 167 aa21.36■■□□□ 1.01
PDLIM5-205ENST00000380180 TNFSF13BQ9Y275 285 aa21.36■■□□□ 1.01
PDLIM5-205ENST00000380180 PASKQ96RG2 1323 aa21.36■■□□□ 1.01
PDLIM5-205ENST00000380180 PHACTR2O75167 634 aa21.35■■□□□ 1.01
PDLIM5-205ENST00000380180 MMEP08473 750 aa21.35■■□□□ 1.01
PDLIM5-205ENST00000380180 ZNF865P0CJ78 1059 aaPredicted RBP21.35■■□□□ 1.01
PDLIM5-205ENST00000380180 KRT5P13647 590 aa21.35■■□□□ 1.01
PDLIM5-205ENST00000380180 CYP2B6P20813 491 aa21.35■■□□□ 1.01
PDLIM5-205ENST00000380180 CLCN6P51797 869 aa21.35■■□□□ 1.01
PDLIM5-205ENST00000380180 SCARA3Q6AZY7 606 aa21.35■■□□□ 1.01
PDLIM5-205ENST00000380180 IFNLR1Q8IU57 520 aaPredicted RBP21.35■■□□□ 1.01
PDLIM5-205ENST00000380180 WDR49Q8IV35 697 aa21.35■■□□□ 1.01
PDLIM5-205ENST00000380180 GOLPH3Q9H4A6 298 aa21.35■■□□□ 1.01
PDLIM5-205ENST00000380180 APOBEC3GQ9HC16 384 aaKnown RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms