RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 HEMGNQ9BXL5 484 aa11.6□□□□□ -0.55
USP6NL-202ENST00000379237 MARCOQ9UEW3 520 aaPredicted RBP11.6□□□□□ -0.55
USP6NL-202ENST00000379237 PRKAG3Q9UGI9 489 aa11.6□□□□□ -0.55
USP6NL-202ENST00000379237 MROH2AA6NES4 1674 aa11.59□□□□□ -0.55
USP6NL-202ENST00000379237 MYMKA6NI61 221 aa11.59□□□□□ -0.55
USP6NL-202ENST00000379237 CHN2P52757 468 aa11.59□□□□□ -0.55
USP6NL-202ENST00000379237 TMPRSS15P98073 1019 aa11.59□□□□□ -0.55
USP6NL-202ENST00000379237 HGSNATQ68CP4 663 aa11.59□□□□□ -0.55
USP6NL-202ENST00000379237 PTTG2Q9NZH5 202 aa11.59□□□□□ -0.55
USP6NL-202ENST00000379237 MTO1Q9Y2Z2 717 aaKnown RBP11.59□□□□□ -0.55
USP6NL-202ENST00000379237 DTNAQ9Y4J8 743 aa11.59□□□□□ -0.55
USP6NL-202ENST00000379237 KIF20BQ96Q89 1820 aa11.59□□□□□ -0.55
USP6NL-202ENST00000379237 KLRC4O43908 158 aa11.59□□□□□ -0.55
USP6NL-202ENST00000379237 OR6B1O95007 311 aa11.59□□□□□ -0.55
USP6NL-202ENST00000379237 MAN1A1P33908 653 aa11.59□□□□□ -0.55
USP6NL-202ENST00000379237 OGFOD1Q8N543 542 aa11.59□□□□□ -0.55
USP6NL-202ENST00000379237 SREK1Q8WXA9 508 aaKnown RBP11.59□□□□□ -0.55
USP6NL-202ENST00000379237 DCUN1D5Q9BTE7 237 aa11.59□□□□□ -0.55
USP6NL-202ENST00000379237 BRD8Q9H0E9 1235 aa11.59□□□□□ -0.55
USP6NL-202ENST00000379237 RBMX2Q9Y388 322 aaKnown RBP11.59□□□□□ -0.55
USP6NL-202ENST00000379237 A0A0J9YVX5 310 aa11.59□□□□□ -0.55
USP6NL-202ENST00000379237 PDLIM1O00151 329 aa11.59□□□□□ -0.55
USP6NL-202ENST00000379237 SMAPO00193 183 aa11.59□□□□□ -0.55
USP6NL-202ENST00000379237 GMNNO75496 209 aa11.59□□□□□ -0.55
USP6NL-202ENST00000379237 GOLGA8HP0CJ92 632 aa11.59□□□□□ -0.55
USP6NL-202ENST00000379237 BCRP11274 1271 aa11.59□□□□□ -0.55
USP6NL-202ENST00000379237 ITIH2P19823 946 aa11.59□□□□□ -0.55
USP6NL-202ENST00000379237 C6orf183Q5T699 404 aa11.59□□□□□ -0.55
USP6NL-202ENST00000379237 KAZNQ674X7 775 aa11.59□□□□□ -0.55
USP6NL-202ENST00000379237 THOC7Q6I9Y2 204 aaKnown RBP11.59□□□□□ -0.55
USP6NL-202ENST00000379237 ZNF746Q6NUN9 644 aaPredicted RBP11.59□□□□□ -0.55
USP6NL-202ENST00000379237 IFNL2Q8IZJ0 200 aa11.59□□□□□ -0.55
USP6NL-202ENST00000379237 REXO1Q8N1G1 1221 aaKnown RBP11.59□□□□□ -0.55
USP6NL-202ENST00000379237 SRBD1Q8N5C6 995 aaKnown RBP11.59□□□□□ -0.55
USP6NL-202ENST00000379237 GDPD5Q8WTR4 605 aa11.59□□□□□ -0.55
USP6NL-202ENST00000379237 RBM15Q96T37 977 aaKnown RBP eCLIP11.59□□□□□ -0.551e-6■■■□□ 19.2
USP6NL-202ENST00000379237 FERMT1Q9BQL6 677 aa11.59□□□□□ -0.55
USP6NL-202ENST00000379237 CCDC68Q9H2F9 335 aa11.59□□□□□ -0.55
USP6NL-202ENST00000379237 FRMD4BQ9Y2L6 1034 aa11.59□□□□□ -0.55
USP6NL-202ENST00000379237 CLDN3O15551 220 aa11.59□□□□□ -0.55
USP6NL-202ENST00000379237 KRT75O95678 551 aa11.59□□□□□ -0.55
USP6NL-202ENST00000379237 GM2AP17900 193 aa11.59□□□□□ -0.55
USP6NL-202ENST00000379237 PFKFB3Q16875 520 aaPredicted RBP11.59□□□□□ -0.55
USP6NL-202ENST00000379237 IZUMO3Q5VZ72 239 aa11.59□□□□□ -0.55
USP6NL-202ENST00000379237 CYFIP1Q7L576 1253 aa11.59□□□□□ -0.55
USP6NL-202ENST00000379237 UTP4Q969X6 686 aaKnown RBP11.59□□□□□ -0.55
USP6NL-202ENST00000379237 ARL8BQ9NVJ2 186 aa11.59□□□□□ -0.55
USP6NL-202ENST00000379237 USP6P35125 1406 aa11.58□□□□□ -0.55
USP6NL-202ENST00000379237 MYH7BA7E2Y1 1941 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 IQCA1LA6NCM1 817 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 POTEMA6NI47 508 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 GSG1L2A8MUP6 293 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 ADCY6O43306 1168 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 TLR2O60603 784 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 KLRC3Q07444 240 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 COASYQ13057 564 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 ITGA9Q13797 1035 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 SH3D19Q5HYK7 790 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 TMEM53Q6P2H8 277 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 CLNKQ7Z7G1 428 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 CCDC89Q8N998 374 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 ATL2Q8NHH9 583 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 NLRP7Q8WX94 980 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 EBF3Q9H4W6 596 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 CTDP1Q9Y5B0 961 aaPredicted RBP11.58□□□□□ -0.56
USP6NL-202ENST00000379237 NDUFB5O43674 189 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 FOXO4P98177 505 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 ACVR2BQ13705 512 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 KIF22Q14807 665 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 RIPOR1Q6ZS17 1223 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 TBCKQ8TEA7 893 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 SPIRE2Q8WWL2 714 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 PPP1R14BQ96C90 147 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 MANSC1Q9H8J5 431 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 SLC52A2Q9HAB3 445 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 EPB41L4AQ9HCS5 686 aaPredicted RBP11.58□□□□□ -0.56
USP6NL-202ENST00000379237 ERVK-5Q9HDB9 667 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 MCM9Q9NXL9 1143 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 SENP1Q9P0U3 644 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 ZNF510Q9Y2H8 683 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 HBS1LQ9Y450 684 aaKnown RBP11.58□□□□□ -0.56
USP6NL-202ENST00000379237 WDR46O15213 610 aaKnown RBP11.58□□□□□ -0.56
USP6NL-202ENST00000379237 KRT4P19013 534 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 RASA2Q15283 850 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 PKN1Q16512 942 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 RARS2Q5T160 578 aaKnown RBP11.58□□□□□ -0.56
USP6NL-202ENST00000379237 GJB7Q6PEY0 223 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 PRPF39Q86UA1 669 aaKnown RBP11.58□□□□□ -0.56
USP6NL-202ENST00000379237 ERLEC1Q96DZ1 483 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 TMEM120AQ9BXJ8 343 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 ADAM7Q9H2U9 754 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 DNAJC12Q9UKB3 198 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 ZBTB21Q9ULJ3 1066 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 FLT1P17948 1338 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 CCDC195A0A1B0GUA6 201 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 NBPF26B4DH59 902 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 GOLGA8SH3BPF8 625 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 GOLGA8MH3BSY2 632 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 MYL2P10916 166 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 CAV1Q03135 178 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms