RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 AGAP1Q9UPQ3 857 aa17.22■□□□□ 0.35
RGP1-201ENST00000378078 ATP1A3P13637 1013 aa17.22■□□□□ 0.35
RGP1-201ENST00000378078 ORC1Q13415 861 aa17.22■□□□□ 0.35
RGP1-201ENST00000378078 TBC1D19Q8N5T2 526 aa17.22■□□□□ 0.35
RGP1-201ENST00000378078 RIN3Q8TB24 985 aa17.22■□□□□ 0.35
RGP1-201ENST00000378078 RAD54LQ92698 747 aa17.22■□□□□ 0.35
RGP1-201ENST00000378078 PEG3Q9GZU2 1588 aa17.22■□□□□ 0.35
RGP1-201ENST00000378078 EML4Q9HC35 981 aaKnown RBP17.22■□□□□ 0.35
RGP1-201ENST00000378078 SCUBE2Q9NQ36 999 aa17.22■□□□□ 0.35
RGP1-201ENST00000378078 PRPF3O43395 683 aaKnown RBP17.21■□□□□ 0.35
RGP1-201ENST00000378078 EIF3EP60228 445 aaKnown RBP17.21■□□□□ 0.35
RGP1-201ENST00000378078 EIF2AK1Q9BQI3 630 aaKnown RBP17.21■□□□□ 0.35
RGP1-201ENST00000378078 STAP1Q9ULZ2 295 aa17.21■□□□□ 0.35
RGP1-201ENST00000378078 SNX9Q9Y5X1 595 aa17.21■□□□□ 0.35
RGP1-201ENST00000378078 ZNF197O14709 1029 aa17.21■□□□□ 0.35
RGP1-201ENST00000378078 DGKHQ86XP1 1220 aa17.21■□□□□ 0.35
RGP1-201ENST00000378078 YIPF3Q9GZM5 350 aa17.21■□□□□ 0.35
RGP1-201ENST00000378078 CDK17Q00537 523 aa17.21■□□□□ 0.35
RGP1-201ENST00000378078 ADCY2Q08462 1091 aa17.21■□□□□ 0.35
RGP1-201ENST00000378078 DRAP1Q14919 205 aaPredicted RBP17.21■□□□□ 0.35
RGP1-201ENST00000378078 LAYNQ6UX15 382 aa17.21■□□□□ 0.35
RGP1-201ENST00000378078 ACSF2Q96CM8 615 aaPredicted RBP17.21■□□□□ 0.35
RGP1-201ENST00000378078 LINC00854A0A1B0GVQ3 168 aa17.21■□□□□ 0.35
RGP1-201ENST00000378078 CIAO1O76071 339 aa17.21■□□□□ 0.35
RGP1-201ENST00000378078 KRT7P08729 469 aa17.21■□□□□ 0.35
RGP1-201ENST00000378078 SKIP12755 728 aa17.21■□□□□ 0.35
RGP1-201ENST00000378078 KCNH2Q12809 1159 aa17.21■□□□□ 0.35
RGP1-201ENST00000378078 NFKBIZQ9BYH8 718 aa17.21■□□□□ 0.35
RGP1-201ENST00000378078 TTLL13PA6NNM8 815 aa17.21■□□□□ 0.35
RGP1-201ENST00000378078 CYP26A1O43174 497 aa17.21■□□□□ 0.35
RGP1-201ENST00000378078 DNAJB2P25686 324 aa17.21■□□□□ 0.35
RGP1-201ENST00000378078 ABCD1P33897 745 aa17.21■□□□□ 0.35
RGP1-201ENST00000378078 PMS2P54278 862 aa17.21■□□□□ 0.35
RGP1-201ENST00000378078 ABI2Q9NYB9 513 aaPredicted RBP17.21■□□□□ 0.35
RGP1-201ENST00000378078 AGO2Q9UKV8 859 aaKnown RBP17.21■□□□□ 0.35
RGP1-201ENST00000378078 NDUFS3O75489 264 aa17.21■□□□□ 0.34
RGP1-201ENST00000378078 HIST1H2AGP0C0S8 130 aaPredicted RBP17.21■□□□□ 0.34
RGP1-201ENST00000378078 HIST1H2ADP20671 130 aa17.21■□□□□ 0.34
RGP1-201ENST00000378078 PRCPP42785 496 aa17.21■□□□□ 0.34
RGP1-201ENST00000378078 BCAR1P56945 870 aa17.21■□□□□ 0.34
RGP1-201ENST00000378078 SMTNL2Q2TAL5 461 aa17.21■□□□□ 0.34
RGP1-201ENST00000378078 SLC7A14Q8TBB6 771 aa17.21■□□□□ 0.34
RGP1-201ENST00000378078 SSH3Q8TE77 659 aa17.21■□□□□ 0.34
RGP1-201ENST00000378078 HIST1H2AHQ96KK5 128 aa17.21■□□□□ 0.34
RGP1-201ENST00000378078 HIST1H2AJQ99878 128 aa17.21■□□□□ 0.34
RGP1-201ENST00000378078 H2AFJQ9BTM1 129 aa17.21■□□□□ 0.34
RGP1-201ENST00000378078 SPASTQ9UBP0 616 aa17.21■□□□□ 0.34
RGP1-201ENST00000378078 IP6K2Q9UHH9 426 aa17.21■□□□□ 0.34
RGP1-201ENST00000378078 PDXDC1Q6P996 788 aa17.2■□□□□ 0.34
RGP1-201ENST00000378078 ARHGEF25Q86VW2 580 aa17.2■□□□□ 0.34
RGP1-201ENST00000378078 KIAA2013Q8IYS2 634 aa17.2■□□□□ 0.34
RGP1-201ENST00000378078 ATPAF2Q8N5M1 289 aa17.2■□□□□ 0.34
RGP1-201ENST00000378078 SRPRBQ9Y5M8 271 aaKnown RBP17.2■□□□□ 0.34
RGP1-201ENST00000378078 CALB1P05937 261 aa17.2■□□□□ 0.34
RGP1-201ENST00000378078 TRPC1P48995 793 aa17.2■□□□□ 0.34
RGP1-201ENST00000378078 ALS2CLQ60I27 953 aa17.2■□□□□ 0.34
RGP1-201ENST00000378078 PTRHD1Q6GMV3 140 aaKnown RBP17.2■□□□□ 0.34
RGP1-201ENST00000378078 RD3Q7Z3Z2 195 aa17.2■□□□□ 0.34
RGP1-201ENST00000378078 MS4A14Q96JA4 679 aa17.2■□□□□ 0.34
RGP1-201ENST00000378078 MKL2Q9ULH7 1088 aa17.2■□□□□ 0.34
RGP1-201ENST00000378078 MYOM2P54296 1465 aa17.2■□□□□ 0.34
RGP1-201ENST00000378078 EMSYQ7Z589 1322 aa17.2■□□□□ 0.34
RGP1-201ENST00000378078 CELF2O95319 508 aaKnown RBP17.2■□□□□ 0.34
RGP1-201ENST00000378078 MICALL2Q8IY33 904 aa17.2■□□□□ 0.34
RGP1-201ENST00000378078 XXYLT1Q8NBI6 393 aa17.2■□□□□ 0.34
RGP1-201ENST00000378078 YWHABP31946 246 aaKnown RBP17.2■□□□□ 0.34
RGP1-201ENST00000378078 LRG1P02750 347 aa17.2■□□□□ 0.34
RGP1-201ENST00000378078 PCP11498 1178 aaKnown RBP17.2■□□□□ 0.34
RGP1-201ENST00000378078 ALDH1A3P47895 512 aa17.2■□□□□ 0.34
RGP1-201ENST00000378078 DDX50Q9BQ39 737 aaKnown RBP17.2■□□□□ 0.34
RGP1-201ENST00000378078 CAPN1P07384 714 aa17.19■□□□□ 0.34
RGP1-201ENST00000378078 C10orf120Q5SQS8 335 aa17.19■□□□□ 0.34
RGP1-201ENST00000378078 FGD2Q7Z6J4 655 aa17.19■□□□□ 0.34
RGP1-201ENST00000378078 ADCK1Q86TW2 530 aa17.19■□□□□ 0.34
RGP1-201ENST00000378078 CLEC4FQ8N1N0 589 aa17.19■□□□□ 0.34
RGP1-201ENST00000378078 PRMT1Q99873 361 aaKnown RBP17.19■□□□□ 0.34
RGP1-201ENST00000378078 TM6SF1Q9BZW5 370 aa17.19■□□□□ 0.34
RGP1-201ENST00000378078 ZNF711Q9Y462 761 aa17.19■□□□□ 0.34
RGP1-201ENST00000378078 TMEM94Q12767 1356 aa17.19■□□□□ 0.34
RGP1-201ENST00000378078 H0Y626 953 aa17.19■□□□□ 0.34
RGP1-201ENST00000378078 NME5P56597 212 aa17.19■□□□□ 0.34
RGP1-201ENST00000378078 LRRC71Q8N4P6 559 aa17.19■□□□□ 0.34
RGP1-201ENST00000378078 FAM167AQ96KS9 214 aa17.19■□□□□ 0.34
RGP1-201ENST00000378078 GSNP06396 782 aa17.19■□□□□ 0.34
RGP1-201ENST00000378078 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.19■□□□□ 0.34
RGP1-201ENST00000378078 PAWRQ96IZ0 340 aaKnown RBP17.19■□□□□ 0.34
RGP1-201ENST00000378078 ATP11BQ9Y2G3 1177 aa17.19■□□□□ 0.34
RGP1-201ENST00000378078 CAB39Q9Y376 341 aaPredicted RBP17.19■□□□□ 0.34
RGP1-201ENST00000378078 PRKCBP05771 671 aa17.19■□□□□ 0.34
RGP1-201ENST00000378078 HORMAD1Q86X24 394 aa17.19■□□□□ 0.34
RGP1-201ENST00000378078 IPMKQ8NFU5 416 aa17.19■□□□□ 0.34
RGP1-201ENST00000378078 ENO3P13929 434 aaPredicted RBP17.19■□□□□ 0.34
RGP1-201ENST00000378078 GALNT4Q8N4A0 578 aa17.19■□□□□ 0.34
RGP1-201ENST00000378078 TMEM47Q9BQJ4 181 aa17.19■□□□□ 0.34
RGP1-201ENST00000378078 GPR63Q9BZJ6 419 aa17.19■□□□□ 0.34
RGP1-201ENST00000378078 FAM32AQ9Y421 112 aaKnown RBP17.19■□□□□ 0.34
RGP1-201ENST00000378078 MLNP12872 115 aa17.19■□□□□ 0.34
RGP1-201ENST00000378078 HPCAP84074 193 aa17.19■□□□□ 0.34
RGP1-201ENST00000378078 GRIN1Q05586 938 aa17.19■□□□□ 0.34
RGP1-201ENST00000378078 GPD1LQ8N335 351 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms