RNA–Protein interactions for RNA: ENST00000377877.4

RNF38-205, Transcript of ring finger protein 38, humanhuman

TSL 2 BASIC

Gene RNF38, Length 1,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-205ENST00000377877 BAP1Q92560 729 aa22.81■■□□□ 1.24
RNF38-205ENST00000377877 SEMA4DQ92854 862 aa22.81■■□□□ 1.24
RNF38-205ENST00000377877 FNBP1Q96RU3 617 aa22.81■■□□□ 1.24
RNF38-205ENST00000377877 EIF2AQ9BY44 585 aaKnown RBP22.81■■□□□ 1.24
RNF38-205ENST00000377877 ZMYND15Q9H091 742 aa22.81■■□□□ 1.24
RNF38-205ENST00000377877 ABHD10Q9NUJ1 306 aa22.81■■□□□ 1.24
RNF38-205ENST00000377877 A0A1W2PQJ5 194 aa22.81■■□□□ 1.24
RNF38-205ENST00000377877 TNNI1P19237 187 aa22.81■■□□□ 1.24
RNF38-205ENST00000377877 MXI1P50539 228 aa22.81■■□□□ 1.24
RNF38-205ENST00000377877 CDK7P50613 346 aa22.81■■□□□ 1.24
RNF38-205ENST00000377877 ENPEPQ07075 957 aa22.81■■□□□ 1.24
RNF38-205ENST00000377877 EPC2Q52LR7 807 aa22.81■■□□□ 1.24
RNF38-205ENST00000377877 TRIM65Q6PJ69 517 aa22.81■■□□□ 1.24
RNF38-205ENST00000377877 ELMO3Q96BJ8 720 aa22.81■■□□□ 1.24
RNF38-205ENST00000377877 PANX2Q96RD6 677 aa22.81■■□□□ 1.24
RNF38-205ENST00000377877 TMEM8AQ9HCN3 771 aa22.81■■□□□ 1.24
RNF38-205ENST00000377877 PLCB1Q9NQ66 1216 aa22.81■■□□□ 1.24
RNF38-205ENST00000377877 AJAP1Q9UKB5 411 aaPredicted RBP22.81■■□□□ 1.24
RNF38-205ENST00000377877 M0QZ92 97 aa22.8■■□□□ 1.24
RNF38-205ENST00000377877 NRDCO43847 1150 aa22.8■■□□□ 1.24
RNF38-205ENST00000377877 NPTXRO95502 500 aa22.8■■□□□ 1.24
RNF38-205ENST00000377877 C4BPAP04003 597 aaKnown RBP22.8■■□□□ 1.24
RNF38-205ENST00000377877 MNX1P50219 401 aaPredicted RBP22.8■■□□□ 1.24
RNF38-205ENST00000377877 NCBP1Q09161 790 aaKnown RBP22.8■■□□□ 1.24
RNF38-205ENST00000377877 PCBP1Q15365 356 aaKnown RBP eCLIP22.8■■□□□ 1.24
RNF38-205ENST00000377877 KRT39Q6A163 491 aa22.8■■□□□ 1.24
RNF38-205ENST00000377877 C15orf39Q6ZRI6 1047 aa22.8■■□□□ 1.24
RNF38-205ENST00000377877 OR5B17Q8NGF7 314 aa22.8■■□□□ 1.24
RNF38-205ENST00000377877 OR8K1Q8NGG5 319 aa22.8■■□□□ 1.24
RNF38-205ENST00000377877 INTS2Q9H0H0 1204 aaKnown RBP22.8■■□□□ 1.24
RNF38-205ENST00000377877 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.8■■□□□ 1.242e-7■■■■■ 106.2
RNF38-205ENST00000377877 PMM2O15305 246 aa22.8■■□□□ 1.24
RNF38-205ENST00000377877 CXCL8P10145 99 aa22.8■■□□□ 1.24
RNF38-205ENST00000377877 ZBED6P86452 979 aa22.8■■□□□ 1.24
RNF38-205ENST00000377877 GPIHBP1Q8IV16 184 aa22.8■■□□□ 1.24
RNF38-205ENST00000377877 CCAR2Q8N163 923 aaKnown RBP22.8■■□□□ 1.24
RNF38-205ENST00000377877 TAS1R2Q8TE23 839 aa22.8■■□□□ 1.24
RNF38-205ENST00000377877 DNAJC7Q99615 494 aa22.8■■□□□ 1.24
RNF38-205ENST00000377877 AGO3Q9H9G7 860 aaKnown RBP22.8■■□□□ 1.24
RNF38-205ENST00000377877 PIN4Q9Y237 131 aaKnown RBP22.8■■□□□ 1.24
RNF38-205ENST00000377877 ANK1P16157 1881 aa22.79■■□□□ 1.24
RNF38-205ENST00000377877 P4HA2O15460 535 aa22.79■■□□□ 1.24
RNF38-205ENST00000377877 STX10O60499 249 aa22.79■■□□□ 1.24
RNF38-205ENST00000377877 UCHL3P15374 230 aa22.79■■□□□ 1.24
RNF38-205ENST00000377877 GTF2H1P32780 548 aa22.79■■□□□ 1.24
RNF38-205ENST00000377877 CTCFP49711 727 aaPredicted RBP22.79■■□□□ 1.24
RNF38-205ENST00000377877 ZNF618Q5T7W0 954 aa22.79■■□□□ 1.24
RNF38-205ENST00000377877 E4F1Q66K89 784 aaPredicted RBP22.79■■□□□ 1.24
RNF38-205ENST00000377877 NOTUMQ6P988 496 aa22.79■■□□□ 1.24
RNF38-205ENST00000377877 WDR59Q6PJI9 974 aa22.79■■□□□ 1.24
RNF38-205ENST00000377877 RRAGAQ7L523 313 aa22.79■■□□□ 1.24
RNF38-205ENST00000377877 USP37Q86T82 979 aa22.79■■□□□ 1.24
RNF38-205ENST00000377877 U2AF1L4Q8WU68 220 aaKnown RBP22.79■■□□□ 1.24
RNF38-205ENST00000377877 BAG1Q99933 345 aaPredicted RBP22.79■■□□□ 1.24
RNF38-205ENST00000377877 ADPGKQ9BRR6 497 aa22.79■■□□□ 1.24
RNF38-205ENST00000377877 CRISPLD2Q9H0B8 497 aa22.79■■□□□ 1.24
RNF38-205ENST00000377877 CEP72Q9P209 647 aa22.79■■□□□ 1.24
RNF38-205ENST00000377877 ST3GAL5Q9UNP4 418 aa22.79■■□□□ 1.24
RNF38-205ENST00000377877 COQ4Q9Y3A0 265 aa22.79■■□□□ 1.24
RNF38-205ENST00000377877 FHOD1Q9Y613 1164 aa22.79■■□□□ 1.24
RNF38-205ENST00000377877 N4BP1O75113 896 aaKnown RBP22.78■■□□□ 1.24
RNF38-205ENST00000377877 RPS6KA5O75582 802 aa22.78■■□□□ 1.24
RNF38-205ENST00000377877 SGPL1O95470 568 aa22.78■■□□□ 1.24
RNF38-205ENST00000377877 TFRCP02786 760 aaKnown RBP22.78■■□□□ 1.24
RNF38-205ENST00000377877 CLTAP09496 248 aa22.78■■□□□ 1.24
RNF38-205ENST00000377877 KCNJ6P48051 423 aa22.78■■□□□ 1.24
RNF38-205ENST00000377877 SLC10A6Q3KNW5 377 aa22.78■■□□□ 1.24
RNF38-205ENST00000377877 UBXN11Q5T124 520 aa22.78■■□□□ 1.24
RNF38-205ENST00000377877 PHLDB3Q6NSJ2 640 aa22.78■■□□□ 1.24
RNF38-205ENST00000377877 SLC27A1Q6PCB7 646 aa22.78■■□□□ 1.24
RNF38-205ENST00000377877 CGRRF1Q99675 332 aa22.78■■□□□ 1.24
RNF38-205ENST00000377877 CXCL16Q9H2A7 254 aa22.78■■□□□ 1.24
RNF38-205ENST00000377877 RPF1Q9H9Y2 349 aaKnown RBP22.78■■□□□ 1.24
RNF38-205ENST00000377877 HES2Q9Y543 173 aa22.78■■□□□ 1.24
RNF38-205ENST00000377877 LACTBL1A8MY62 500 aa22.78■■□□□ 1.24
RNF38-205ENST00000377877 AXLP30530 894 aa22.78■■□□□ 1.24
RNF38-205ENST00000377877 TDRD10Q5VZ19 366 aaKnown RBP22.78■■□□□ 1.24
RNF38-205ENST00000377877 CACNA2D4Q7Z3S7 1137 aa22.78■■□□□ 1.24
RNF38-205ENST00000377877 CCDC51Q96ER9 411 aa22.78■■□□□ 1.24
RNF38-205ENST00000377877 CHP1Q99653 195 aa22.78■■□□□ 1.24
RNF38-205ENST00000377877 EDEM3Q9BZQ6 932 aa22.78■■□□□ 1.24
RNF38-205ENST00000377877 LRRC53A6NM62 1247 aa22.77■■□□□ 1.24
RNF38-205ENST00000377877 USP27XA6NNY8 438 aa22.77■■□□□ 1.24
RNF38-205ENST00000377877 NFX1Q12986 1120 aaKnown RBP22.77■■□□□ 1.24
RNF38-205ENST00000377877 ZACNQ401N2 412 aa22.77■■□□□ 1.24
RNF38-205ENST00000377877 IQCEQ6IPM2 695 aa22.77■■□□□ 1.24
RNF38-205ENST00000377877 TMEM130Q8N3G9 435 aa22.77■■□□□ 1.24
RNF38-205ENST00000377877 ARMC5Q96C12 935 aa22.77■■□□□ 1.24
RNF38-205ENST00000377877 IQCDQ96DY2 449 aa22.77■■□□□ 1.24
RNF38-205ENST00000377877 TRIP11Q15643 1979 aa22.77■■□□□ 1.24
RNF38-205ENST00000377877 VNN1O95497 513 aa22.76■■□□□ 1.23
RNF38-205ENST00000377877 CKBP12277 381 aa22.76■■□□□ 1.23
RNF38-205ENST00000377877 FAM26DQ5JW98 314 aa22.76■■□□□ 1.23
RNF38-205ENST00000377877 FBXO47Q5MNV8 452 aa22.76■■□□□ 1.23
RNF38-205ENST00000377877 EFCAB13Q8IY85 973 aa22.76■■□□□ 1.23
RNF38-205ENST00000377877 FBXL13Q8NEE6 735 aa22.76■■□□□ 1.23
RNF38-205ENST00000377877 ZNF397Q8NF99 534 aaPredicted RBP22.76■■□□□ 1.23
RNF38-205ENST00000377877 ZNF592Q92610 1267 aa22.76■■□□□ 1.23
RNF38-205ENST00000377877 NAA15Q9BXJ9 866 aaKnown RBP22.76■■□□□ 1.23
RNF38-205ENST00000377877 RAB20Q9NX57 234 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms