RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 KCND2Q9NZV8 630 aa17.12■□□□□ 0.33
SDHB-201ENST00000375499 C2CD2LO14523 706 aa17.11■□□□□ 0.33
SDHB-201ENST00000375499 CNPP09543 421 aaKnown RBP17.11■□□□□ 0.33
SDHB-201ENST00000375499 NASPP49321 788 aaPredicted RBP17.11■□□□□ 0.33
SDHB-201ENST00000375499 ZNF131P52739 623 aa17.11■□□□□ 0.33
SDHB-201ENST00000375499 NCKAP1LP55160 1127 aa17.11■□□□□ 0.33
SDHB-201ENST00000375499 OSTNP61366 133 aa17.11■□□□□ 0.33
SDHB-201ENST00000375499 TUSC3Q13454 348 aa17.11■□□□□ 0.33
SDHB-201ENST00000375499 SLC39A14Q15043 492 aa17.11■□□□□ 0.33
SDHB-201ENST00000375499 FUT10Q6P4F1 479 aa17.11■□□□□ 0.33
SDHB-201ENST00000375499 SPRYD3Q8NCJ5 442 aa17.11■□□□□ 0.33
SDHB-201ENST00000375499 RASSF8Q8NHQ8 419 aa17.11■□□□□ 0.33
SDHB-201ENST00000375499 SLC22A17Q8WUG5 538 aa17.11■□□□□ 0.33
SDHB-201ENST00000375499 KLHL5Q96PQ7 755 aa17.11■□□□□ 0.33
SDHB-201ENST00000375499 PHOX2BQ99453 314 aa17.11■□□□□ 0.33
SDHB-201ENST00000375499 ZSCAN16Q9H4T2 348 aaPredicted RBP17.11■□□□□ 0.33
SDHB-201ENST00000375499 RBM19Q9Y4C8 960 aaKnown RBP17.11■□□□□ 0.33
SDHB-201ENST00000375499 C2orf16Q68DN1 1984 aa17.11■□□□□ 0.33
SDHB-201ENST00000375499 GFRA3O60609 400 aa17.1■□□□□ 0.33
SDHB-201ENST00000375499 KIF4AO95239 1232 aa17.1■□□□□ 0.33
SDHB-201ENST00000375499 SRGAP2BP0DMP2 458 aa17.1■□□□□ 0.33
SDHB-201ENST00000375499 HARSP12081 509 aaKnown RBP17.1■□□□□ 0.33
SDHB-201ENST00000375499 GRM5P41594 1212 aa17.1■□□□□ 0.33
SDHB-201ENST00000375499 SEZ6Q53EL9 994 aa17.1■□□□□ 0.33
SDHB-201ENST00000375499 MPZL3Q6UWV2 235 aa17.1■□□□□ 0.33
SDHB-201ENST00000375499 TMEM130Q8N3G9 435 aa17.1■□□□□ 0.33
SDHB-201ENST00000375499 C12orf76Q8N812 135 aaPredicted RBP17.1■□□□□ 0.33
SDHB-201ENST00000375499 LINC00301Q8NCQ3 95 aa17.1■□□□□ 0.33
SDHB-201ENST00000375499 CASP10Q92851 521 aa17.1■□□□□ 0.33
SDHB-201ENST00000375499 PPP1R10Q96QC0 940 aaKnown RBP17.1■□□□□ 0.33
SDHB-201ENST00000375499 GOLGA2P5Q9HBQ8 144 aa17.1■□□□□ 0.33
SDHB-201ENST00000375499 ADAM28Q9UKQ2 775 aa17.1■□□□□ 0.33
SDHB-201ENST00000375499 ODF2LQ9ULJ1 636 aa17.1■□□□□ 0.33
SDHB-201ENST00000375499 MORC2Q9Y6X9 1032 aaPredicted RBP17.1■□□□□ 0.33
SDHB-201ENST00000375499 DENND4AQ7Z401 1863 aa17.1■□□□□ 0.33
SDHB-201ENST00000375499 FAM13AO94988 1023 aa17.09■□□□□ 0.33
SDHB-201ENST00000375499 BRD1O95696 1058 aa17.09■□□□□ 0.33
SDHB-201ENST00000375499 URODP06132 367 aa17.09■□□□□ 0.33
SDHB-201ENST00000375499 THP07101 528 aa17.09■□□□□ 0.33
SDHB-201ENST00000375499 WEE2P0C1S8 567 aa17.09■□□□□ 0.33
SDHB-201ENST00000375499 AVPR2P30518 371 aa17.09■□□□□ 0.33
SDHB-201ENST00000375499 DSG1Q02413 1049 aa17.09■□□□□ 0.33
SDHB-201ENST00000375499 SOX4Q06945 474 aaPredicted RBP17.09■□□□□ 0.33
SDHB-201ENST00000375499 HSP90AA2PQ14568 343 aaPredicted RBP17.09■□□□□ 0.33
SDHB-201ENST00000375499 FOXD4L6Q3SYB3 417 aaPredicted RBP17.09■□□□□ 0.33
SDHB-201ENST00000375499 KIAA0319Q5VV43 1072 aa17.09■□□□□ 0.33
SDHB-201ENST00000375499 FOXD4L3Q6VB84 417 aaPredicted RBP17.09■□□□□ 0.33
SDHB-201ENST00000375499 ZMAT2Q96NC0 199 aaKnown RBP17.09■□□□□ 0.33
SDHB-201ENST00000375499 CHST7Q9NS84 486 aa17.09■□□□□ 0.33
SDHB-201ENST00000375499 ANKFY1Q9P2R3 1169 aa17.09■□□□□ 0.33
SDHB-201ENST00000375499 TFIP11Q9UBB9 837 aaKnown RBP17.09■□□□□ 0.33
SDHB-201ENST00000375499 PROB1E7EW31 1015 aa17.08■□□□□ 0.32
SDHB-201ENST00000375499 K7ENM7 598 aa17.08■□□□□ 0.32
SDHB-201ENST00000375499 TEX28O15482 410 aa17.08■□□□□ 0.32
SDHB-201ENST00000375499 DDIT3P35638 169 aa17.08■□□□□ 0.32
SDHB-201ENST00000375499 GLUD2P49448 558 aa17.08■□□□□ 0.32
SDHB-201ENST00000375499 CLCN4P51793 760 aa17.08■□□□□ 0.32
SDHB-201ENST00000375499 SMTNP53814 917 aa17.08■□□□□ 0.32
SDHB-201ENST00000375499 BMS1Q14692 1282 aaKnown RBP17.08■□□□□ 0.32
SDHB-201ENST00000375499 NOLC1Q14978 699 aaKnown RBP eCLIP17.08■□□□□ 0.32
SDHB-201ENST00000375499 XKR4Q5GH76 650 aa17.08■□□□□ 0.32
SDHB-201ENST00000375499 SLC39A4Q6P5W5 647 aa17.08■□□□□ 0.32
SDHB-201ENST00000375499 CD300LGQ6UXG3 332 aa17.08■□□□□ 0.32
SDHB-201ENST00000375499 ALKAL1Q6UXT8 129 aa17.08■□□□□ 0.32
SDHB-201ENST00000375499 HAUS6Q7Z4H7 955 aa17.08■□□□□ 0.32
SDHB-201ENST00000375499 KRI1Q8N9T8 703 aaKnown RBP17.08■□□□□ 0.32
SDHB-201ENST00000375499 C3orf58Q8NDZ4 430 aa17.08■□□□□ 0.32
SDHB-201ENST00000375499 KCNN1Q92952 543 aa17.08■□□□□ 0.32
SDHB-201ENST00000375499 COLEC11Q9BWP8 271 aa17.08■□□□□ 0.32
SDHB-201ENST00000375499 PARVGQ9HBI0 331 aa17.08■□□□□ 0.32
SDHB-201ENST00000375499 MRPL17Q9NRX2 175 aaKnown RBP17.08■□□□□ 0.32
SDHB-201ENST00000375499 LARSQ9P2J5 1176 aaKnown RBP17.08■□□□□ 0.32
SDHB-201ENST00000375499 MYMKA6NI61 221 aa17.07■□□□□ 0.32
SDHB-201ENST00000375499 TOM1L1O75674 476 aa17.07■□□□□ 0.32
SDHB-201ENST00000375499 F13A1P00488 732 aa17.07■□□□□ 0.32
SDHB-201ENST00000375499 MCF2P10911 925 aa17.07■□□□□ 0.32
SDHB-201ENST00000375499 HOXB8P17481 243 aaPredicted RBP17.07■□□□□ 0.32
SDHB-201ENST00000375499 SP100P23497 879 aaPredicted RBP17.07■□□□□ 0.32
SDHB-201ENST00000375499 NMT1P30419 496 aaKnown RBP17.07■□□□□ 0.32
SDHB-201ENST00000375499 STRN3Q13033 797 aa17.07■□□□□ 0.32
SDHB-201ENST00000375499 STK38Q15208 465 aa17.07■□□□□ 0.32
SDHB-201ENST00000375499 RTP2Q5QGT7 225 aa17.07■□□□□ 0.32
SDHB-201ENST00000375499 RARS2Q5T160 578 aaKnown RBP17.07■□□□□ 0.32
SDHB-201ENST00000375499 DYMQ7RTS9 669 aa17.07■□□□□ 0.32
SDHB-201ENST00000375499 MYCT1Q8N699 235 aa17.07■□□□□ 0.32
SDHB-201ENST00000375499 ATOH1Q92858 354 aaPredicted RBP17.07■□□□□ 0.32
SDHB-201ENST00000375499 ASIC4Q96FT7 647 aa17.07■□□□□ 0.32
SDHB-201ENST00000375499 CCDC94Q9BW85 323 aaPredicted RBP17.07■□□□□ 0.32
SDHB-201ENST00000375499 PANK2Q9BZ23 570 aa17.07■□□□□ 0.32
SDHB-201ENST00000375499 ZHX3Q9H4I2 956 aa17.07■□□□□ 0.32
SDHB-201ENST00000375499 STK17AQ9UEE5 414 aa17.07■□□□□ 0.32
SDHB-201ENST00000375499 MTCL1Q9Y4B5 1905 aaKnown RBP17.06■□□□□ 0.32
SDHB-201ENST00000375499 ANK1P16157 1881 aa17.06■□□□□ 0.32
SDHB-201ENST00000375499 SMIM28A0A1B0GU29 152 aa17.06■□□□□ 0.32
SDHB-201ENST00000375499 TRAK2O60296 914 aa17.06■□□□□ 0.32
SDHB-201ENST00000375499 NR1I2O75469 434 aa17.06■□□□□ 0.32
SDHB-201ENST00000375499 KRT18P05783 430 aaKnown RBP17.06■□□□□ 0.32
SDHB-201ENST00000375499 ZSCAN22P10073 491 aaPredicted RBP17.06■□□□□ 0.32
SDHB-201ENST00000375499 MYBP10242 640 aa17.06■□□□□ 0.32
SDHB-201ENST00000375499 RPL17P18621 184 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms