RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 PUF60Q9UHX1 559 aaKnown RBP17.43■□□□□ 0.38
HDHD3-202ENST00000374180 PRRC2BQ5JSZ5 2229 aaKnown RBP17.43■□□□□ 0.38
HDHD3-202ENST00000374180 SMIM28A0A1B0GU29 152 aa17.42■□□□□ 0.38
HDHD3-202ENST00000374180 NRP1O14786 923 aa17.42■□□□□ 0.38
HDHD3-202ENST00000374180 HOXD13P35453 343 aa17.42■□□□□ 0.38
HDHD3-202ENST00000374180 TNFSF9P41273 254 aa17.42■□□□□ 0.38
HDHD3-202ENST00000374180 UBE3AQ05086 875 aa17.42■□□□□ 0.38
HDHD3-202ENST00000374180 PNOCQ13519 176 aa17.42■□□□□ 0.38
HDHD3-202ENST00000374180 SLC10A6Q3KNW5 377 aa17.42■□□□□ 0.38
HDHD3-202ENST00000374180 XKR4Q5GH76 650 aa17.42■□□□□ 0.38
HDHD3-202ENST00000374180 GLRA4Q5JXX5 417 aa17.42■□□□□ 0.38
HDHD3-202ENST00000374180 POF1BQ8WVV4 589 aa17.42■□□□□ 0.38
HDHD3-202ENST00000374180 TMEM169Q96HH4 297 aa17.42■□□□□ 0.38
HDHD3-202ENST00000374180 SNX27Q96L92 541 aa17.42■□□□□ 0.38
HDHD3-202ENST00000374180 RPF1Q9H9Y2 349 aaKnown RBP17.42■□□□□ 0.38
HDHD3-202ENST00000374180 UBE4BO95155 1302 aa17.42■□□□□ 0.38
HDHD3-202ENST00000374180 PRUNE2Q8WUY3 3088 aa17.42■□□□□ 0.38
HDHD3-202ENST00000374180 MYO7AQ13402 2215 aa17.41■□□□□ 0.38
HDHD3-202ENST00000374180 FAM189A1O60320 539 aa17.41■□□□□ 0.38
HDHD3-202ENST00000374180 RHOBTB3O94955 611 aa17.41■□□□□ 0.38
HDHD3-202ENST00000374180 SMC2O95347 1197 aa17.41■□□□□ 0.38
HDHD3-202ENST00000374180 CXCL8P10145 99 aa17.41■□□□□ 0.38
HDHD3-202ENST00000374180 GARTP22102 1010 aa17.41■□□□□ 0.38
HDHD3-202ENST00000374180 DNAJB1P25685 340 aa17.41■□□□□ 0.38
HDHD3-202ENST00000374180 ACOT2P49753 483 aa17.41■□□□□ 0.38
HDHD3-202ENST00000374180 TUSC3Q13454 348 aa17.41■□□□□ 0.38
HDHD3-202ENST00000374180 KCNB1Q14721 858 aa17.41■□□□□ 0.38
HDHD3-202ENST00000374180 ZBTB41Q5SVQ8 909 aa17.41■□□□□ 0.38
HDHD3-202ENST00000374180 NELFCDQ8IXH7 590 aa17.41■□□□□ 0.38
HDHD3-202ENST00000374180 MICALL1Q8N3F8 863 aa17.41■□□□□ 0.38
HDHD3-202ENST00000374180 IGSF21Q96ID5 467 aa17.41■□□□□ 0.38
HDHD3-202ENST00000374180 PLEKHA5Q9HAU0 1116 aa17.41■□□□□ 0.38
HDHD3-202ENST00000374180 LZTS1Q9Y250 596 aa17.41■□□□□ 0.38
HDHD3-202ENST00000374180 PRG3Q9Y2Y8 225 aaPredicted RBP17.41■□□□□ 0.38
HDHD3-202ENST00000374180 CSPG5O95196 566 aa17.4■□□□□ 0.38
HDHD3-202ENST00000374180 KCNE1P15382 129 aa17.4■□□□□ 0.38
HDHD3-202ENST00000374180 CCDC85BQ15834 202 aaPredicted RBP17.4■□□□□ 0.38
HDHD3-202ENST00000374180 ENOX2Q16206 610 aaKnown RBP17.4■□□□□ 0.38
HDHD3-202ENST00000374180 BMT2Q1RMZ1 405 aa17.4■□□□□ 0.38
HDHD3-202ENST00000374180 ARMCX5Q6P1M9 558 aa17.4■□□□□ 0.38
HDHD3-202ENST00000374180 TMEM173Q86WV6 379 aaPredicted RBP17.4■□□□□ 0.38
HDHD3-202ENST00000374180 ELOA2Q8IYF1 753 aaPredicted RBP17.4■□□□□ 0.38
HDHD3-202ENST00000374180 KIAA0895Q8NCT3 520 aa17.4■□□□□ 0.38
HDHD3-202ENST00000374180 MICAL1Q8TDZ2 1067 aa17.4■□□□□ 0.38
HDHD3-202ENST00000374180 PPM1EQ8WY54 764 aa17.4■□□□□ 0.38
HDHD3-202ENST00000374180 ZMAT2Q96NC0 199 aaKnown RBP17.4■□□□□ 0.38
HDHD3-202ENST00000374180 PPP1R10Q96QC0 940 aaKnown RBP17.4■□□□□ 0.38
HDHD3-202ENST00000374180 COLEC11Q9BWP8 271 aa17.4■□□□□ 0.38
HDHD3-202ENST00000374180 SLC38A7Q9NVC3 462 aa17.4■□□□□ 0.38
HDHD3-202ENST00000374180 CNTN3Q9P232 1028 aa17.4■□□□□ 0.38
HDHD3-202ENST00000374180 CPSF3Q9UKF6 684 aaKnown RBP17.4■□□□□ 0.38
HDHD3-202ENST00000374180 KIAA1671Q9BY89 1806 aa17.4■□□□□ 0.38
HDHD3-202ENST00000374180 TTC26A0AVF1 554 aa17.39■□□□□ 0.37
HDHD3-202ENST00000374180 CASTOR2A6NHX0 329 aa17.39■□□□□ 0.37
HDHD3-202ENST00000374180 LACTBL1A8MY62 500 aa17.39■□□□□ 0.37
HDHD3-202ENST00000374180 MEFVO15553 781 aaPredicted RBP17.39■□□□□ 0.37
HDHD3-202ENST00000374180 LDHAP00338 332 aaKnown RBP17.39■□□□□ 0.37
HDHD3-202ENST00000374180 PPP2R3AQ06190 1150 aa17.39■□□□□ 0.37
HDHD3-202ENST00000374180 CAMK1Q14012 370 aa17.39■□□□□ 0.37
HDHD3-202ENST00000374180 NAB2Q15742 525 aa17.39■□□□□ 0.37
HDHD3-202ENST00000374180 KNOP1Q1ED39 458 aaKnown RBP17.39■□□□□ 0.37
HDHD3-202ENST00000374180 HS2ST1Q7LGA3 356 aa17.39■□□□□ 0.37
HDHD3-202ENST00000374180 MAFAQ8NHW3 353 aaPredicted RBP17.39■□□□□ 0.37
HDHD3-202ENST00000374180 SMARCE1Q969G3 411 aa17.39■□□□□ 0.37
HDHD3-202ENST00000374180 FAM212AQ96EL1 285 aa17.39■□□□□ 0.37
HDHD3-202ENST00000374180 GSDMAQ96QA5 445 aa17.39■□□□□ 0.37
HDHD3-202ENST00000374180 CBWD1Q9BRT8 395 aa17.39■□□□□ 0.37
HDHD3-202ENST00000374180 FAM213AQ9BRX8 229 aa17.39■□□□□ 0.37
HDHD3-202ENST00000374180 PCIF1Q9H4Z3 704 aa17.39■□□□□ 0.37
HDHD3-202ENST00000374180 TLR9Q9NR96 1032 aa17.39■□□□□ 0.37
HDHD3-202ENST00000374180 RMND1Q9NWS8 449 aa17.39■□□□□ 0.37
HDHD3-202ENST00000374180 REV3LO60673 3130 aa17.38■□□□□ 0.37
HDHD3-202ENST00000374180 KIAA0391O15091 583 aaKnown RBP17.38■□□□□ 0.37
HDHD3-202ENST00000374180 TGFB1I1O43294 461 aa17.38■□□□□ 0.37
HDHD3-202ENST00000374180 KIF20AO95235 890 aa17.38■□□□□ 0.37
HDHD3-202ENST00000374180 SNRPFP62306 86 aaKnown RBP17.38■□□□□ 0.37
HDHD3-202ENST00000374180 CD302Q8IX05 232 aa17.38■□□□□ 0.37
HDHD3-202ENST00000374180 NOC3LQ8WTT2 800 aaKnown RBP17.38■□□□□ 0.37
HDHD3-202ENST00000374180 BCL7CQ8WUZ0 217 aaPredicted RBP17.38■□□□□ 0.37
HDHD3-202ENST00000374180 RABGGTAQ92696 567 aa17.38■□□□□ 0.37
HDHD3-202ENST00000374180 ERCC4Q92889 916 aaPredicted RBP17.38■□□□□ 0.37
HDHD3-202ENST00000374180 SAAL1Q96ER3 474 aa17.38■□□□□ 0.37
HDHD3-202ENST00000374180 AGPAT3Q9NRZ7 376 aa17.38■□□□□ 0.37
HDHD3-202ENST00000374180 CGNQ9P2M7 1197 aaKnown RBP17.38■□□□□ 0.37
HDHD3-202ENST00000374180 CACNG4Q9UBN1 327 aa17.38■□□□□ 0.37
HDHD3-202ENST00000374180 PCDHA5Q9Y5H7 936 aa17.38■□□□□ 0.37
HDHD3-202ENST00000374180 TDRD15B5MCY1 1934 aaKnown RBP17.38■□□□□ 0.37
HDHD3-202ENST00000374180 GOLGA6L22H0YM25 854 aa17.37■□□□□ 0.37
HDHD3-202ENST00000374180 EXTL3O43909 919 aa17.37■□□□□ 0.37
HDHD3-202ENST00000374180 ADRB2P07550 413 aa17.37■□□□□ 0.37
HDHD3-202ENST00000374180 ERVFC1P60507 584 aa17.37■□□□□ 0.37
HDHD3-202ENST00000374180 POU5F1Q01860 360 aaKnown RBP17.37■□□□□ 0.37
HDHD3-202ENST00000374180 SPAG1Q07617 926 aa17.37■□□□□ 0.37
HDHD3-202ENST00000374180 HSP90AA2PQ14568 343 aaPredicted RBP17.37■□□□□ 0.37
HDHD3-202ENST00000374180 BMS1Q14692 1282 aaKnown RBP17.37■□□□□ 0.37
HDHD3-202ENST00000374180 TIGD5Q53EQ6 642 aa17.37■□□□□ 0.37
HDHD3-202ENST00000374180 PDE12Q6L8Q7 609 aaKnown RBP17.37■□□□□ 0.37
HDHD3-202ENST00000374180 CRELD2Q6UXH1 353 aaPredicted RBP17.37■□□□□ 0.37
HDHD3-202ENST00000374180 TMC7Q7Z402 723 aa17.37■□□□□ 0.37
HDHD3-202ENST00000374180 DDX53Q86TM3 631 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms