RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 R3HDMLQ9H3Y0 253 aa20.11■□□□□ 0.81
USP49-202ENST00000373010 GTF3C4Q9UKN8 822 aa20.11■□□□□ 0.81
USP49-202ENST00000373010 SOWAHBA6NEL2 793 aa20.11■□□□□ 0.81
USP49-202ENST00000373010 HLA-DRAP01903 254 aa20.11■□□□□ 0.81
USP49-202ENST00000373010 EDN1P05305 212 aa20.11■□□□□ 0.81
USP49-202ENST00000373010 ARL2P36404 184 aa20.11■□□□□ 0.81
USP49-202ENST00000373010 TDRD10Q5VZ19 366 aaKnown RBP20.11■□□□□ 0.81
USP49-202ENST00000373010 OR2W6PQ8NHA6 318 aa20.11■□□□□ 0.81
USP49-202ENST00000373010 CD101Q93033 1021 aa20.11■□□□□ 0.81
USP49-202ENST00000373010 K7ERI5 159 aa20.1■□□□□ 0.81
USP49-202ENST00000373010 SPOPO43791 374 aa20.1■□□□□ 0.81
USP49-202ENST00000373010 CLEC16AQ2KHT3 1053 aa20.1■□□□□ 0.81
USP49-202ENST00000373010 CEP85LQ5SZL2 805 aa20.1■□□□□ 0.81
USP49-202ENST00000373010 GADL1Q6ZQY3 521 aa20.1■□□□□ 0.81
USP49-202ENST00000373010 NCAPG2Q86XI2 1143 aa20.1■□□□□ 0.81
USP49-202ENST00000373010 ZDHHC14Q8IZN3 488 aa20.1■□□□□ 0.81
USP49-202ENST00000373010 ATP8B4Q8TF62 1192 aa20.1■□□□□ 0.81
USP49-202ENST00000373010 SLC7A3Q8WY07 619 aa20.1■□□□□ 0.81
USP49-202ENST00000373010 CAPS2Q9BXY5 557 aa20.1■□□□□ 0.81
USP49-202ENST00000373010 KIAA1586Q9HCI6 787 aa20.1■□□□□ 0.81
USP49-202ENST00000373010 ANKFY1Q9P2R3 1169 aa20.1■□□□□ 0.81
USP49-202ENST00000373010 STYXL1Q9Y6J8 313 aa20.1■□□□□ 0.81
USP49-202ENST00000373010 FARP2O94887 1054 aaPredicted RBP20.1■□□□□ 0.81
USP49-202ENST00000373010 C4BPAP04003 597 aaKnown RBP20.1■□□□□ 0.81
USP49-202ENST00000373010 PYGMP11217 842 aa20.1■□□□□ 0.81
USP49-202ENST00000373010 NAMPTP43490 491 aa20.1■□□□□ 0.81
USP49-202ENST00000373010 IRAK1P51617 712 aa20.1■□□□□ 0.81
USP49-202ENST00000373010 CLDN10P78369 228 aa20.1■□□□□ 0.81
USP49-202ENST00000373010 BIRC3Q13489 604 aa20.1■□□□□ 0.81
USP49-202ENST00000373010 ZACNQ401N2 412 aa20.1■□□□□ 0.81
USP49-202ENST00000373010 EEPD1Q7L9B9 569 aa20.1■□□□□ 0.81
USP49-202ENST00000373010 RIOX2Q8IUF8 465 aa20.1■□□□□ 0.81
USP49-202ENST00000373010 LRRC45Q96CN5 670 aa20.1■□□□□ 0.81
USP49-202ENST00000373010 C18orf8Q96DM3 657 aa20.1■□□□□ 0.81
USP49-202ENST00000373010 NIFKQ9BYG3 293 aaKnown RBP20.1■□□□□ 0.81
USP49-202ENST00000373010 MAF1Q9H063 256 aa20.1■□□□□ 0.81
USP49-202ENST00000373010 WNT8AQ9H1J5 351 aa20.1■□□□□ 0.81
USP49-202ENST00000373010 FAM114A2Q9NRY5 505 aa20.1■□□□□ 0.81
USP49-202ENST00000373010 CNOT8Q9UFF9 292 aaKnown RBP20.1■□□□□ 0.81
USP49-202ENST00000373010 SIP14410 1827 aa20.09■□□□□ 0.81
USP49-202ENST00000373010 IGKV6D-21A0A0A0MT36 114 aa20.09■□□□□ 0.81
USP49-202ENST00000373010 ADM5C9JUS6 153 aa20.09■□□□□ 0.81
USP49-202ENST00000373010 ZC3H11AO75152 810 aaKnown RBP eCLIP20.09■□□□□ 0.81
USP49-202ENST00000373010 VNN1O95497 513 aa20.09■□□□□ 0.81
USP49-202ENST00000373010 PIK3CAP42336 1068 aa20.09■□□□□ 0.81
USP49-202ENST00000373010 ENPEPQ07075 957 aa20.09■□□□□ 0.81
USP49-202ENST00000373010 PHLDB2Q86SQ0 1253 aa20.09■□□□□ 0.81
USP49-202ENST00000373010 PRELID2Q8N945 189 aa20.09■□□□□ 0.81
USP49-202ENST00000373010 FBXO40Q9UH90 709 aa20.09■□□□□ 0.81
USP49-202ENST00000373010 TCRBV7S2A1N4TA0A589 114 aa20.08■□□□□ 0.81
USP49-202ENST00000373010 IVLP07476 585 aa20.08■□□□□ 0.81
USP49-202ENST00000373010 ATP1A2P50993 1020 aa20.08■□□□□ 0.81
USP49-202ENST00000373010 SEZ6Q53EL9 994 aa20.08■□□□□ 0.81
USP49-202ENST00000373010 WDR44Q5JSH3 913 aa20.08■□□□□ 0.81
USP49-202ENST00000373010 ENOSF1Q7L5Y1 443 aa20.08■□□□□ 0.81
USP49-202ENST00000373010 PAGR1Q9BTK6 254 aa20.08■□□□□ 0.81
USP49-202ENST00000373010 MSTO1Q9BUK6 570 aa20.08■□□□□ 0.81
USP49-202ENST00000373010 RBAKQ9NYW8 714 aaPredicted RBP20.08■□□□□ 0.81
USP49-202ENST00000373010 CWC15Q9P013 229 aaKnown RBP20.08■□□□□ 0.81
USP49-202ENST00000373010 UVRAGQ9P2Y5 699 aa20.08■□□□□ 0.81
USP49-202ENST00000373010 OTOFQ9HC10 1997 aa20.08■□□□□ 0.81
USP49-202ENST00000373010 H0YGN5 161 aa20.08■□□□□ 0.8
USP49-202ENST00000373010 DDNO94850 711 aaPredicted RBP20.08■□□□□ 0.8
USP49-202ENST00000373010 ABCD1P33897 745 aa20.08■□□□□ 0.8
USP49-202ENST00000373010 GNGT1P63211 74 aa20.08■□□□□ 0.8
USP49-202ENST00000373010 DRP2Q13474 957 aa20.08■□□□□ 0.8
USP49-202ENST00000373010 SEL1L2Q5TEA6 688 aa20.08■□□□□ 0.8
USP49-202ENST00000373010 DUPD1Q68J44 220 aa20.08■□□□□ 0.8
USP49-202ENST00000373010 UBLCP1Q8WVY7 318 aaPredicted RBP20.08■□□□□ 0.8
USP49-202ENST00000373010 CPA5Q8WXQ8 436 aa20.08■□□□□ 0.8
USP49-202ENST00000373010 SPATC1LQ9H0A9 340 aa20.08■□□□□ 0.8
USP49-202ENST00000373010 RAB17Q9H0T7 212 aa20.08■□□□□ 0.8
USP49-202ENST00000373010 NFS1Q9Y697 457 aa20.08■□□□□ 0.8
USP49-202ENST00000373010 A0A0G2JMZ2 1700 aa20.08■□□□□ 0.8
USP49-202ENST00000373010 PHF2O75151 1096 aa20.07■□□□□ 0.8
USP49-202ENST00000373010 HARSP12081 509 aaKnown RBP20.07■□□□□ 0.8
USP49-202ENST00000373010 PPP2R5EQ16537 467 aa20.07■□□□□ 0.8
USP49-202ENST00000373010 TMC3Q7Z5M5 1100 aa20.07■□□□□ 0.8
USP49-202ENST00000373010 JAMLQ86YT9 394 aa20.07■□□□□ 0.8
USP49-202ENST00000373010 MORC4Q8TE76 937 aa20.07■□□□□ 0.8
USP49-202ENST00000373010 ERP44Q9BS26 406 aa20.07■□□□□ 0.8
USP49-202ENST00000373010 KCNG1Q9UIX4 513 aa20.07■□□□□ 0.8
USP49-202ENST00000373010 DICER1Q9UPY3 1922 aaKnown RBP20.07■□□□□ 0.8
USP49-202ENST00000373010 PIGRP01833 764 aa20.07■□□□□ 0.8
USP49-202ENST00000373010 UNGP13051 313 aaPredicted RBP20.07■□□□□ 0.8
USP49-202ENST00000373010 CTNNA1P35221 906 aaKnown RBP20.07■□□□□ 0.8
USP49-202ENST00000373010 STAT5BP51692 787 aa20.07■□□□□ 0.8
USP49-202ENST00000373010 DHX9Q08211 1270 aaKnown RBP20.07■□□□□ 0.8
USP49-202ENST00000373010 CAPSQ13938 189 aa20.07■□□□□ 0.8
USP49-202ENST00000373010 TARBP2Q15633 366 aaKnown RBP20.07■□□□□ 0.8
USP49-202ENST00000373010 CLUL1Q15846 466 aa20.07■□□□□ 0.8
USP49-202ENST00000373010 SKIDA1Q1XH10 827 aa20.07■□□□□ 0.8
USP49-202ENST00000373010 C2CD6Q53TS8 623 aa20.07■□□□□ 0.8
USP49-202ENST00000373010 LLGL2Q6P1M3 1020 aa20.07■□□□□ 0.8
USP49-202ENST00000373010 TTC27Q6P3X3 843 aa20.07■□□□□ 0.8
USP49-202ENST00000373010 MAGOHBQ96A72 148 aaKnown RBP20.07■□□□□ 0.8
USP49-202ENST00000373010 TRIM7Q9C029 511 aa20.07■□□□□ 0.8
USP49-202ENST00000373010 RABEP2Q9H5N1 569 aa20.07■□□□□ 0.8
USP49-202ENST00000373010 APOBEC3GQ9HC16 384 aaKnown RBP20.07■□□□□ 0.8
USP49-202ENST00000373010 CSADQ9Y600 493 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms