RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 BRSK2Q8IWQ3 736 aa22.41■■□□□ 1.18
SHISA4-201ENST00000362011 TMC2Q8TDI7 906 aa22.41■■□□□ 1.18
SHISA4-201ENST00000362011 OSBPL7Q9BZF2 842 aa22.41■■□□□ 1.18
SHISA4-201ENST00000362011 TRIM6Q9C030 488 aaPredicted RBP22.41■■□□□ 1.18
SHISA4-201ENST00000362011 ZNF576Q9H609 170 aa22.41■■□□□ 1.18
SHISA4-201ENST00000362011 CHST12Q9NRB3 414 aa22.41■■□□□ 1.18
SHISA4-201ENST00000362011 INTS13Q9NVM9 706 aa22.41■■□□□ 1.18
SHISA4-201ENST00000362011 RBAKQ9NYW8 714 aaPredicted RBP22.41■■□□□ 1.18
SHISA4-201ENST00000362011 CPSF3Q9UKF6 684 aaKnown RBP22.41■■□□□ 1.18
SHISA4-201ENST00000362011 PADI3Q9ULW8 664 aa22.41■■□□□ 1.18
SHISA4-201ENST00000362011 AFPP02771 609 aaKnown RBP22.4■■□□□ 1.18
SHISA4-201ENST00000362011 CDC25BP30305 580 aa22.4■■□□□ 1.18
SHISA4-201ENST00000362011 TNFSF9P41273 254 aa22.4■■□□□ 1.18
SHISA4-201ENST00000362011 KCNH2Q12809 1159 aa22.4■■□□□ 1.18
SHISA4-201ENST00000362011 PSMD6Q15008 389 aa22.4■■□□□ 1.18
SHISA4-201ENST00000362011 TMEM240Q5SV17 173 aa22.4■■□□□ 1.18
SHISA4-201ENST00000362011 FKBP15Q5T1M5 1219 aa22.4■■□□□ 1.18
SHISA4-201ENST00000362011 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.4■■□□□ 1.18
SHISA4-201ENST00000362011 CEP120Q8N960 986 aa22.4■■□□□ 1.18
SHISA4-201ENST00000362011 SLC35C1Q96A29 364 aa22.4■■□□□ 1.18
SHISA4-201ENST00000362011 HIPK3Q9H422 1215 aa22.4■■□□□ 1.18
SHISA4-201ENST00000362011 PRDM6Q9NQX0 595 aa22.4■■□□□ 1.18
SHISA4-201ENST00000362011 TEX33O43247 280 aa22.39■■□□□ 1.18
SHISA4-201ENST00000362011 CLTAP09496 248 aa22.39■■□□□ 1.18
SHISA4-201ENST00000362011 TRIM49P0CI25 452 aa22.39■■□□□ 1.18
SHISA4-201ENST00000362011 TRIM49CP0CI26 452 aa22.39■■□□□ 1.18
SHISA4-201ENST00000362011 ZSCAN20P17040 1043 aaPredicted RBP22.39■■□□□ 1.18
SHISA4-201ENST00000362011 GRM5P41594 1212 aa22.39■■□□□ 1.18
SHISA4-201ENST00000362011 MCCD1P59942 119 aaPredicted RBP22.39■■□□□ 1.18
SHISA4-201ENST00000362011 OSTNP61366 133 aa22.39■■□□□ 1.18
SHISA4-201ENST00000362011 POU5F1Q01860 360 aaKnown RBP22.39■■□□□ 1.18
SHISA4-201ENST00000362011 UBXN1Q04323 297 aa22.39■■□□□ 1.18
SHISA4-201ENST00000362011 PPIGQ13427 754 aaKnown RBP eCLIP22.39■■□□□ 1.18
SHISA4-201ENST00000362011 MBTPS1Q14703 1052 aa22.39■■□□□ 1.18
SHISA4-201ENST00000362011 SURF1Q15526 300 aa22.39■■□□□ 1.18
SHISA4-201ENST00000362011 TWF2Q6IBS0 349 aaKnown RBP22.39■■□□□ 1.18
SHISA4-201ENST00000362011 PARD3BQ8TEW8 1205 aa22.39■■□□□ 1.18
SHISA4-201ENST00000362011 TIFAQ96CG3 184 aa22.39■■□□□ 1.18
SHISA4-201ENST00000362011 CCDC94Q9BW85 323 aaPredicted RBP22.39■■□□□ 1.18
SHISA4-201ENST00000362011 EIF2AQ9BY44 585 aaKnown RBP22.39■■□□□ 1.18
SHISA4-201ENST00000362011 RPF1Q9H9Y2 349 aaKnown RBP22.39■■□□□ 1.18
SHISA4-201ENST00000362011 MUC3AQ02505 3323 aa22.39■■□□□ 1.17
SHISA4-201ENST00000362011 STX10O60499 249 aa22.38■■□□□ 1.17
SHISA4-201ENST00000362011 PARNO95453 639 aaKnown RBP22.38■■□□□ 1.17
SHISA4-201ENST00000362011 STAG3L1P0CL83 205 aa22.38■■□□□ 1.17
SHISA4-201ENST00000362011 UBXN11Q5T124 520 aa22.38■■□□□ 1.17
SHISA4-201ENST00000362011 PLEKHO2Q8TD55 490 aa22.38■■□□□ 1.17
SHISA4-201ENST00000362011 FNBP1Q96RU3 617 aa22.38■■□□□ 1.17
SHISA4-201ENST00000362011 PPP1R12CQ9BZL4 782 aa22.38■■□□□ 1.17
SHISA4-201ENST00000362011 UMODL1Q5DID0 1318 aa22.38■■□□□ 1.17
SHISA4-201ENST00000362011 LRRIQ3A6PVS8 624 aaPredicted RBP22.37■■□□□ 1.17
SHISA4-201ENST00000362011 TULP1O00294 542 aaPredicted RBP22.37■■□□□ 1.17
SHISA4-201ENST00000362011 DLG4P78352 724 aa22.37■■□□□ 1.17
SHISA4-201ENST00000362011 CCDC127Q96BQ5 260 aa22.37■■□□□ 1.17
SHISA4-201ENST00000362011 ACAP3Q96P50 834 aa22.37■■□□□ 1.17
SHISA4-201ENST00000362011 IFIH1Q9BYX4 1025 aaKnown RBP22.37■■□□□ 1.17
SHISA4-201ENST00000362011 TTC28Q96AY4 2481 aa22.37■■□□□ 1.17
SHISA4-201ENST00000362011 N4BP1O75113 896 aaKnown RBP22.36■■□□□ 1.17
SHISA4-201ENST00000362011 IL18RAPO95256 599 aa22.36■■□□□ 1.17
SHISA4-201ENST00000362011 DSC3Q14574 896 aa22.36■■□□□ 1.17
SHISA4-201ENST00000362011 ENOX2Q16206 610 aaKnown RBP22.36■■□□□ 1.17
SHISA4-201ENST00000362011 DRC7Q8IY82 874 aa22.36■■□□□ 1.17
SHISA4-201ENST00000362011 TMEM192Q8IY95 271 aa22.36■■□□□ 1.17
SHISA4-201ENST00000362011 FAM212AQ96EL1 285 aa22.36■■□□□ 1.17
SHISA4-201ENST00000362011 CGRRF1Q99675 332 aa22.36■■□□□ 1.17
SHISA4-201ENST00000362011 PBX4Q9BYU1 374 aa22.36■■□□□ 1.17
SHISA4-201ENST00000362011 TMX1Q9H3N1 280 aa22.36■■□□□ 1.17
SHISA4-201ENST00000362011 MMRN2Q9H8L6 949 aa22.36■■□□□ 1.17
SHISA4-201ENST00000362011 PDE11AQ9HCR9 933 aa22.36■■□□□ 1.17
SHISA4-201ENST00000362011 CXCL8P10145 99 aa22.35■■□□□ 1.17
SHISA4-201ENST00000362011 DLATP10515 647 aaKnown RBP22.35■■□□□ 1.17
SHISA4-201ENST00000362011 CSF2RAP15509 400 aa22.35■■□□□ 1.17
SHISA4-201ENST00000362011 PBX1P40424 430 aa22.35■■□□□ 1.17
SHISA4-201ENST00000362011 FMO5P49326 533 aa22.35■■□□□ 1.17
SHISA4-201ENST00000362011 MYL7Q01449 175 aa22.35■■□□□ 1.17
SHISA4-201ENST00000362011 CCDC173Q0VFZ6 552 aa22.35■■□□□ 1.17
SHISA4-201ENST00000362011 TJAP1Q5JTD0 557 aa22.35■■□□□ 1.17
SHISA4-201ENST00000362011 C1orf220Q5T0J3 134 aa22.35■■□□□ 1.17
SHISA4-201ENST00000362011 FAM43BQ6ZT52 329 aaPredicted RBP22.35■■□□□ 1.17
SHISA4-201ENST00000362011 VSTM4Q8IW00 320 aa22.35■■□□□ 1.17
SHISA4-201ENST00000362011 TMEM199Q8N511 208 aa22.35■■□□□ 1.17
SHISA4-201ENST00000362011 ERGIC2Q96RQ1 377 aa22.35■■□□□ 1.17
SHISA4-201ENST00000362011 WNT8AQ9H1J5 351 aa22.35■■□□□ 1.17
SHISA4-201ENST00000362011 FAM105AQ9NUU6 356 aa22.35■■□□□ 1.17
SHISA4-201ENST00000362011 SNTG2Q9NY99 539 aa22.35■■□□□ 1.17
SHISA4-201ENST00000362011 A0A1W2PQC6 194 aa22.34■■□□□ 1.17
SHISA4-201ENST00000362011 NBNO60934 754 aa22.34■■□□□ 1.17
SHISA4-201ENST00000362011 GTF2H1P32780 548 aa22.34■■□□□ 1.17
SHISA4-201ENST00000362011 CYP2C18P33260 490 aa22.34■■□□□ 1.17
SHISA4-201ENST00000362011 PBX2P40425 430 aa22.34■■□□□ 1.17
SHISA4-201ENST00000362011 RAB27AP51159 221 aa22.34■■□□□ 1.17
SHISA4-201ENST00000362011 YARSP54577 528 aaKnown RBP22.34■■□□□ 1.17
SHISA4-201ENST00000362011 CCL23P55773 120 aa22.34■■□□□ 1.17
SHISA4-201ENST00000362011 WNT7BP56706 349 aa22.34■■□□□ 1.17
SHISA4-201ENST00000362011 PSRC1Q6PGN9 363 aaPredicted RBP22.34■■□□□ 1.17
SHISA4-201ENST00000362011 TMC6Q7Z403 805 aa22.34■■□□□ 1.17
SHISA4-201ENST00000362011 HACE1Q8IYU2 909 aa22.34■■□□□ 1.17
SHISA4-201ENST00000362011 PDLIM2Q96JY6 352 aa22.34■■□□□ 1.17
SHISA4-201ENST00000362011 NXF3Q9H4D5 531 aaKnown RBP22.34■■□□□ 1.17
SHISA4-201ENST00000362011 IPPQ9Y573 584 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms