RNA–Protein interactions for RNA: ENST00000360620.7

EPHB4-202, Transcript of EPH receptor B4, humanhuman

TSL 1 (best) BASIC

Gene EPHB4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-202ENST00000360620 GSCP56915 257 aaPredicted RBP12.73□□□□□ -0.37
EPHB4-202ENST00000360620 ANKRD20A2Q5SQ80 823 aa12.73□□□□□ -0.37
EPHB4-202ENST00000360620 ANKRD20A1Q5TYW2 823 aa12.73□□□□□ -0.37
EPHB4-202ENST00000360620 FOXR2Q6PJQ5 311 aa12.73□□□□□ -0.37
EPHB4-202ENST00000360620 ZBTB10Q96DT7 871 aa12.73□□□□□ -0.37
EPHB4-202ENST00000360620 TMEM117Q9H0C3 514 aa12.73□□□□□ -0.37
EPHB4-202ENST00000360620 ERVK-5Q9HDB9 667 aa12.73□□□□□ -0.37
EPHB4-202ENST00000360620 SENP1Q9P0U3 644 aa12.73□□□□□ -0.37
EPHB4-202ENST00000360620 PPARGC1AQ9UBK2 798 aaKnown RBP12.73□□□□□ -0.37
EPHB4-202ENST00000360620 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.73□□□□□ -0.37
EPHB4-202ENST00000360620 TCP10L2B9ZVM9 353 aa12.73□□□□□ -0.37
EPHB4-202ENST00000360620 TLR3O15455 904 aaKnown RBP12.73□□□□□ -0.37
EPHB4-202ENST00000360620 SORBS3O60504 671 aa12.73□□□□□ -0.37
EPHB4-202ENST00000360620 STAM2O75886 525 aa12.73□□□□□ -0.37
EPHB4-202ENST00000360620 ZWINTO95229 277 aa12.73□□□□□ -0.37
EPHB4-202ENST00000360620 LACTB2Q53H82 288 aaPredicted RBP12.73□□□□□ -0.37
EPHB4-202ENST00000360620 CASC4Q6P4E1 433 aa12.73□□□□□ -0.37
EPHB4-202ENST00000360620 PRELID2Q8N945 189 aa12.73□□□□□ -0.37
EPHB4-202ENST00000360620 ATXN2LQ8WWM7 1075 aaKnown RBP12.73□□□□□ -0.37
EPHB4-202ENST00000360620 SREK1Q8WXA9 508 aaKnown RBP12.73□□□□□ -0.37
EPHB4-202ENST00000360620 CEP170P1Q96L14 293 aa12.73□□□□□ -0.37
EPHB4-202ENST00000360620 CTNNAL1Q9UBT7 734 aa12.73□□□□□ -0.37
EPHB4-202ENST00000360620 SMG5Q9UPR3 1016 aaKnown RBP12.73□□□□□ -0.37
EPHB4-202ENST00000360620 NDUFB10O96000 172 aa12.73□□□□□ -0.37
EPHB4-202ENST00000360620 APBA3O96018 575 aa12.73□□□□□ -0.37
EPHB4-202ENST00000360620 SSTR3P32745 418 aaPredicted RBP12.73□□□□□ -0.37
EPHB4-202ENST00000360620 CTCFP49711 727 aaPredicted RBP12.73□□□□□ -0.37
EPHB4-202ENST00000360620 MRPS35P82673 323 aaKnown RBP12.73□□□□□ -0.37
EPHB4-202ENST00000360620 MTM1Q13496 603 aa12.73□□□□□ -0.37
EPHB4-202ENST00000360620 CBWD6Q4V339 395 aa12.73□□□□□ -0.37
EPHB4-202ENST00000360620 CBWD3Q5JTY5 395 aa12.73□□□□□ -0.37
EPHB4-202ENST00000360620 SLC10A5Q5PT55 438 aa12.73□□□□□ -0.37
EPHB4-202ENST00000360620 CBWD5Q5RIA9 395 aa12.73□□□□□ -0.37
EPHB4-202ENST00000360620 TMEM154Q6P9G4 183 aa12.73□□□□□ -0.37
EPHB4-202ENST00000360620 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.73□□□□□ -0.37
EPHB4-202ENST00000360620 SMC1BQ8NDV3 1235 aa12.73□□□□□ -0.37
EPHB4-202ENST00000360620 DEPTORQ8TB45 409 aa12.73□□□□□ -0.37
EPHB4-202ENST00000360620 CPA5Q8WXQ8 436 aa12.73□□□□□ -0.37
EPHB4-202ENST00000360620 FAM161BQ96MY7 647 aa12.73□□□□□ -0.37
EPHB4-202ENST00000360620 OSBPL8Q9BZF1 889 aa12.73□□□□□ -0.37
EPHB4-202ENST00000360620 DLGAP2Q9P1A6 1054 aa12.73□□□□□ -0.37
EPHB4-202ENST00000360620 PHTF1Q9UMS5 762 aa12.73□□□□□ -0.37
EPHB4-202ENST00000360620 NEU2Q9Y3R4 380 aa12.73□□□□□ -0.37
EPHB4-202ENST00000360620 KIF1AQ12756 1690 aa12.73□□□□□ -0.37
EPHB4-202ENST00000360620 SIPA1L3O60292 1781 aaPredicted RBP12.72□□□□□ -0.37
EPHB4-202ENST00000360620 MYO3BQ8WXR4 1341 aa12.72□□□□□ -0.37
EPHB4-202ENST00000360620 M0R2N6 131 aa12.72□□□□□ -0.37
EPHB4-202ENST00000360620 RALAP11233 206 aa12.72□□□□□ -0.37
EPHB4-202ENST00000360620 MARSP56192 900 aaKnown RBP12.72□□□□□ -0.37
EPHB4-202ENST00000360620 C11orf63Q6NUN7 778 aa12.72□□□□□ -0.37
EPHB4-202ENST00000360620 ANKMY2Q8IV38 441 aa12.72□□□□□ -0.37
EPHB4-202ENST00000360620 RBM41Q96IZ5 413 aaKnown RBP12.72□□□□□ -0.37
EPHB4-202ENST00000360620 MAGEB18Q96M61 343 aa12.72□□□□□ -0.37
EPHB4-202ENST00000360620 POLR3CQ9BUI4 534 aaPredicted RBP12.72□□□□□ -0.37
EPHB4-202ENST00000360620 OLFML3Q9NRN5 406 aa12.72□□□□□ -0.37
EPHB4-202ENST00000360620 SCINQ9Y6U3 715 aa12.72□□□□□ -0.37
EPHB4-202ENST00000360620 DCCP43146 1447 aa12.72□□□□□ -0.37
EPHB4-202ENST00000360620 LRRIQ4A6NIV6 560 aa12.72□□□□□ -0.37
EPHB4-202ENST00000360620 NVLO15381 856 aaKnown RBP12.72□□□□□ -0.37
EPHB4-202ENST00000360620 MARK3P27448 753 aa12.72□□□□□ -0.37
EPHB4-202ENST00000360620 ARL4CP56559 192 aa12.72□□□□□ -0.37
EPHB4-202ENST00000360620 TMEM270Q6UE05 265 aa12.72□□□□□ -0.37
EPHB4-202ENST00000360620 ERICH1Q86X53 443 aa12.72□□□□□ -0.37
EPHB4-202ENST00000360620 RASGEF1CQ8N431 466 aa12.72□□□□□ -0.37
EPHB4-202ENST00000360620 CYP2W1Q8TAV3 490 aa12.72□□□□□ -0.37
EPHB4-202ENST00000360620 WHRNQ9P202 907 aa12.72□□□□□ -0.37
EPHB4-202ENST00000360620 ANGPTL2Q9UKU9 493 aa12.72□□□□□ -0.37
EPHB4-202ENST00000360620 PNMA3Q9UL41 463 aa12.72□□□□□ -0.37
EPHB4-202ENST00000360620 MAD1L1Q9Y6D9 718 aa12.72□□□□□ -0.37
EPHB4-202ENST00000360620 DENND3A2RUS2 1198 aa12.72□□□□□ -0.37
EPHB4-202ENST00000360620 STAMBPO95630 424 aa12.72□□□□□ -0.37
EPHB4-202ENST00000360620 SLURP2P0DP57 97 aa12.72□□□□□ -0.37
EPHB4-202ENST00000360620 SERPINB6P35237 376 aa12.72□□□□□ -0.37
EPHB4-202ENST00000360620 CRKP46108 304 aa12.72□□□□□ -0.37
EPHB4-202ENST00000360620 C2CD6Q53TS8 623 aa12.72□□□□□ -0.37
EPHB4-202ENST00000360620 EXOC3L1Q86VI1 746 aa12.72□□□□□ -0.37
EPHB4-202ENST00000360620 KLF6Q99612 283 aaPredicted RBP12.72□□□□□ -0.37
EPHB4-202ENST00000360620 TTC1Q99614 292 aa12.72□□□□□ -0.37
EPHB4-202ENST00000360620 FERMT1Q9BQL6 677 aa12.72□□□□□ -0.37
EPHB4-202ENST00000360620 ZFATQ9P243 1243 aa12.72□□□□□ -0.37
EPHB4-202ENST00000360620 NAALADL1Q9UQQ1 740 aa12.72□□□□□ -0.37
EPHB4-202ENST00000360620 ZBTB12Q9Y330 459 aaPredicted RBP12.72□□□□□ -0.37
EPHB4-202ENST00000360620 C5P01031 1676 aa12.71□□□□□ -0.37
EPHB4-202ENST00000360620 KRT19P08727 400 aa12.71□□□□□ -0.37
EPHB4-202ENST00000360620 MYBL1P10243 752 aa12.71□□□□□ -0.37
EPHB4-202ENST00000360620 DRG2P55039 364 aaKnown RBP12.71□□□□□ -0.37
EPHB4-202ENST00000360620 MAP7Q14244 749 aa12.71□□□□□ -0.37
EPHB4-202ENST00000360620 TMEM237Q96Q45 408 aa12.71□□□□□ -0.37
EPHB4-202ENST00000360620 MOV10L1Q9BXT6 1211 aaKnown RBP12.71□□□□□ -0.37
EPHB4-202ENST00000360620 CALN1Q9BXU9 219 aa12.71□□□□□ -0.37
EPHB4-202ENST00000360620 VCX3AQ9NNX9 186 aa12.71□□□□□ -0.37
EPHB4-202ENST00000360620 STRCP1A6NGW2 1772 aa12.71□□□□□ -0.37
EPHB4-202ENST00000360620 H7C0C1 242 aa12.71□□□□□ -0.37
EPHB4-202ENST00000360620 RNF8O76064 485 aa12.71□□□□□ -0.37
EPHB4-202ENST00000360620 P4HBP07237 508 aaKnown RBP12.71□□□□□ -0.37
EPHB4-202ENST00000360620 ATP5OP48047 213 aa12.71□□□□□ -0.37
EPHB4-202ENST00000360620 TMPRSS15P98073 1019 aa12.71□□□□□ -0.37
EPHB4-202ENST00000360620 SLC35G1Q2M3R5 365 aa12.71□□□□□ -0.37
EPHB4-202ENST00000360620 ZNF394Q53GI3 561 aa12.71□□□□□ -0.37
EPHB4-202ENST00000360620 ZNF720Q7Z2F6 126 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms