RNA–Protein interactions for RNA: ENST00000355522.5

C2CD4A-201, Transcript of C2 calcium dependent domain containing 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2CD4A, Length 3,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD4A-201ENST00000355522 ROPN1BQ9BZX4 212 aaPredicted RBP17.29■□□□□ 0.36
C2CD4A-201ENST00000355522 INTS2Q9H0H0 1204 aaKnown RBP17.29■□□□□ 0.36
C2CD4A-201ENST00000355522 ROPN1Q9HAT0 212 aaPredicted RBP17.29■□□□□ 0.36
C2CD4A-201ENST00000355522 SAYSD1Q9NPB0 183 aa17.29■□□□□ 0.36
C2CD4A-201ENST00000355522 A6NHS1 94 aa17.29■□□□□ 0.36
C2CD4A-201ENST00000355522 GOLGA8SH3BPF8 625 aa17.29■□□□□ 0.36
C2CD4A-201ENST00000355522 GOLGA8MH3BSY2 632 aa17.29■□□□□ 0.36
C2CD4A-201ENST00000355522 ALADP13716 330 aa17.29■□□□□ 0.36
C2CD4A-201ENST00000355522 RHBDL3P58872 404 aa17.29■□□□□ 0.36
C2CD4A-201ENST00000355522 GPC5P78333 572 aa17.29■□□□□ 0.36
C2CD4A-201ENST00000355522 MTFR1Q15390 333 aa17.29■□□□□ 0.36
C2CD4A-201ENST00000355522 GALNTL6Q49A17 601 aa17.29■□□□□ 0.36
C2CD4A-201ENST00000355522 TMEM119Q4V9L6 283 aa17.29■□□□□ 0.36
C2CD4A-201ENST00000355522 UTP4Q969X6 686 aaKnown RBP17.29■□□□□ 0.36
C2CD4A-201ENST00000355522 NUP85Q9BW27 656 aa17.29■□□□□ 0.36
C2CD4A-201ENST00000355522 A0A0A6YYK5 440 aaPredicted RBP17.28■□□□□ 0.36
C2CD4A-201ENST00000355522 MIF4GDA9UHW6 222 aaKnown RBP17.28■□□□□ 0.36
C2CD4A-201ENST00000355522 BCRP11274 1271 aa17.28■□□□□ 0.36
C2CD4A-201ENST00000355522 HSPA6P17066 643 aa17.28■□□□□ 0.36
C2CD4A-201ENST00000355522 VCAM1P19320 739 aa17.28■□□□□ 0.36
C2CD4A-201ENST00000355522 C16orf86Q6ZW13 317 aa17.28■□□□□ 0.36
C2CD4A-201ENST00000355522 MIGA2Q7L4E1 593 aa17.28■□□□□ 0.36
C2CD4A-201ENST00000355522 ARHGAP22Q7Z5H3 698 aa17.28■□□□□ 0.36
C2CD4A-201ENST00000355522 KIFAP3Q92845 792 aa17.28■□□□□ 0.36
C2CD4A-201ENST00000355522 AGPAT1Q99943 283 aa17.28■□□□□ 0.36
C2CD4A-201ENST00000355522 LRRC4BQ9NT99 713 aa17.28■□□□□ 0.36
C2CD4A-201ENST00000355522 RTN3O95197 1032 aaPredicted RBP17.28■□□□□ 0.36
C2CD4A-201ENST00000355522 VHLP40337 213 aa17.28■□□□□ 0.36
C2CD4A-201ENST00000355522 KHDC1Q4VXA5 237 aaKnown RBP17.28■□□□□ 0.36
C2CD4A-201ENST00000355522 CCDC62Q6P9F0 684 aa17.28■□□□□ 0.36
C2CD4A-201ENST00000355522 CERS5Q8N5B7 392 aa17.28■□□□□ 0.36
C2CD4A-201ENST00000355522 RBBP8NLQ8NC74 664 aaPredicted RBP17.28■□□□□ 0.36
C2CD4A-201ENST00000355522 STK33Q9BYT3 514 aa17.28■□□□□ 0.36
C2CD4A-201ENST00000355522 CHKBQ9Y259 395 aa17.28■□□□□ 0.36
C2CD4A-201ENST00000355522 CLRN2A0PK11 232 aa17.28■□□□□ 0.36
C2CD4A-201ENST00000355522 TMEM150BA6NC51 233 aa17.28■□□□□ 0.36
C2CD4A-201ENST00000355522 CDH16O75309 829 aa17.28■□□□□ 0.36
C2CD4A-201ENST00000355522 ATP5HO75947 161 aa17.28■□□□□ 0.36
C2CD4A-201ENST00000355522 GJB6O95452 261 aa17.28■□□□□ 0.36
C2CD4A-201ENST00000355522 TROVE2P10155 538 aaKnown RBP eCLIP17.28■□□□□ 0.36
C2CD4A-201ENST00000355522 KRT5P13647 590 aa17.28■□□□□ 0.36
C2CD4A-201ENST00000355522 ITGB4P16144 1822 aa17.28■□□□□ 0.36
C2CD4A-201ENST00000355522 GM2AP17900 193 aa17.28■□□□□ 0.36
C2CD4A-201ENST00000355522 TAC1P20366 129 aa17.28■□□□□ 0.36
C2CD4A-201ENST00000355522 PRKCIP41743 596 aa17.28■□□□□ 0.36
C2CD4A-201ENST00000355522 PTGIRP43119 386 aa17.28■□□□□ 0.36
C2CD4A-201ENST00000355522 GCLMP48507 274 aa17.28■□□□□ 0.36
C2CD4A-201ENST00000355522 FMO5P49326 533 aa17.28■□□□□ 0.36
C2CD4A-201ENST00000355522 KPNB1Q14974 876 aaKnown RBP17.28■□□□□ 0.36
C2CD4A-201ENST00000355522 ZNF564Q8TBZ8 553 aaPredicted RBP17.28■□□□□ 0.36
C2CD4A-201ENST00000355522 TXLNGYQ9BZA5 131 aa17.28■□□□□ 0.36
C2CD4A-201ENST00000355522 TYW1Q9NV66 732 aaKnown RBP17.28■□□□□ 0.36
C2CD4A-201ENST00000355522 TTC4O95801 387 aa17.27■□□□□ 0.36
C2CD4A-201ENST00000355522 PLS3P13797 630 aa17.27■□□□□ 0.36
C2CD4A-201ENST00000355522 CCDC125Q86Z20 511 aa17.27■□□□□ 0.36
C2CD4A-201ENST00000355522 EPAS1Q99814 870 aa17.27■□□□□ 0.36
C2CD4A-201ENST00000355522 TRABDQ9H4I3 376 aa17.27■□□□□ 0.36
C2CD4A-201ENST00000355522 KCNMB3Q9NPA1 279 aa17.27■□□□□ 0.36
C2CD4A-201ENST00000355522 CHST7Q9NS84 486 aa17.27■□□□□ 0.36
C2CD4A-201ENST00000355522 MKRN3Q13064 507 aaKnown RBP17.27■□□□□ 0.36
C2CD4A-201ENST00000355522 CLUL1Q15846 466 aa17.27■□□□□ 0.36
C2CD4A-201ENST00000355522 DAB2IPQ5VWQ8 1189 aa17.27■□□□□ 0.36
C2CD4A-201ENST00000355522 CATSPER3Q86XQ3 398 aa17.27■□□□□ 0.36
C2CD4A-201ENST00000355522 FAM161BQ96MY7 647 aa17.27■□□□□ 0.36
C2CD4A-201ENST00000355522 P2RX7Q99572 595 aaKnown RBP17.27■□□□□ 0.36
C2CD4A-201ENST00000355522 DCLRE1BQ9H816 532 aa17.27■□□□□ 0.36
C2CD4A-201ENST00000355522 PARP4Q9UKK3 1724 aaKnown RBP17.27■□□□□ 0.35
C2CD4A-201ENST00000355522 LIN7AO14910 233 aaPredicted RBP17.27■□□□□ 0.35
C2CD4A-201ENST00000355522 PIK3CAP42336 1068 aa17.27■□□□□ 0.35
C2CD4A-201ENST00000355522 NPEPPSP55786 919 aa17.27■□□□□ 0.35
C2CD4A-201ENST00000355522 CBWD6Q4V339 395 aa17.27■□□□□ 0.35
C2CD4A-201ENST00000355522 CBWD3Q5JTY5 395 aa17.27■□□□□ 0.35
C2CD4A-201ENST00000355522 CBWD5Q5RIA9 395 aa17.27■□□□□ 0.35
C2CD4A-201ENST00000355522 NLRP9Q7RTR0 991 aa17.27■□□□□ 0.35
C2CD4A-201ENST00000355522 SNF8Q96H20 258 aa17.27■□□□□ 0.35
C2CD4A-201ENST00000355522 ESRRAP11474 423 aaPredicted RBP17.26■□□□□ 0.35
C2CD4A-201ENST00000355522 THOC5Q13769 683 aaKnown RBP17.26■□□□□ 0.35
C2CD4A-201ENST00000355522 SLFN13Q68D06 897 aa17.26■□□□□ 0.35
C2CD4A-201ENST00000355522 MAIP1Q8WWC4 291 aa17.26■□□□□ 0.35
C2CD4A-201ENST00000355522 SEC14L1Q92503 715 aa17.26■□□□□ 0.35
C2CD4A-201ENST00000355522 CCDC127Q96BQ5 260 aa17.26■□□□□ 0.35
C2CD4A-201ENST00000355522 HAUS1Q96CS2 278 aa17.26■□□□□ 0.35
C2CD4A-201ENST00000355522 DNAJC18Q9H819 358 aa17.26■□□□□ 0.35
C2CD4A-201ENST00000355522 USP20Q9Y2K6 914 aa17.26■□□□□ 0.35
C2CD4A-201ENST00000355522 RABGAP1Q9Y3P9 1069 aa17.26■□□□□ 0.35
C2CD4A-201ENST00000355522 GOLGA8IPA6NC78 632 aa17.26■□□□□ 0.35
C2CD4A-201ENST00000355522 GOLGA8JA6NMD2 632 aa17.26■□□□□ 0.35
C2CD4A-201ENST00000355522 PFDN1O60925 122 aa17.26■□□□□ 0.35
C2CD4A-201ENST00000355522 GIT2Q14161 759 aa17.26■□□□□ 0.35
C2CD4A-201ENST00000355522 ARSHQ5FYA8 562 aa17.26■□□□□ 0.35
C2CD4A-201ENST00000355522 DSTYKQ6XUX3 929 aa17.26■□□□□ 0.35
C2CD4A-201ENST00000355522 FAM178BQ8IXR5 827 aa17.26■□□□□ 0.35
C2CD4A-201ENST00000355522 HIPK4Q8NE63 616 aa17.26■□□□□ 0.35
C2CD4A-201ENST00000355522 GRAMD1AQ96CP6 724 aa17.26■□□□□ 0.35
C2CD4A-201ENST00000355522 CRAMP1Q96RY5 1269 aa17.26■□□□□ 0.35
C2CD4A-201ENST00000355522 GORASP1Q9BQQ3 440 aa17.26■□□□□ 0.35
C2CD4A-201ENST00000355522 ANO3Q9BYT9 981 aa17.26■□□□□ 0.35
C2CD4A-201ENST00000355522 RHBDL2Q9NX52 303 aa17.26■□□□□ 0.35
C2CD4A-201ENST00000355522 MYO3BQ8WXR4 1341 aa17.26■□□□□ 0.35
C2CD4A-201ENST00000355522 CREB3O43889 395 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms