RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 CTSWP56202 376 aa12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 NPLOC4Q8TAT6 608 aa12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 CCDC138Q96M89 665 aa12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 CALN1Q9BXU9 219 aa12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 NDFIP2Q9NV92 336 aa12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 PCNTO95613 3336 aa12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 H7C0C1 242 aa12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 BCAP31P51572 246 aa12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 NR5A1Q13285 461 aa12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 C4orf22Q6V702 233 aa12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 MB21D2Q8IYB1 491 aaPredicted RBP12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 DTX3Q8N9I9 347 aa12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 NOX5Q96PH1 765 aa12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 PSKH2Q96QS6 385 aa12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 TGS1Q96RS0 853 aaKnown RBP12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 CCDC28BQ9BUN5 200 aa12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 EHMT1Q9H9B1 1298 aa12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 EPB41L4AQ9HCS5 686 aaPredicted RBP12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 MTRF1LQ9UGC7 380 aaKnown RBP12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 TUBE1Q9UJT0 475 aa12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 OVOS2A0A0G2JMS6 1433 aa12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 A6NL46 340 aa12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 NOL3O60936 208 aaKnown RBP12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 PRLP01236 227 aa12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 AFPP02771 609 aaKnown RBP12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 HOXD10P28358 340 aa12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 RC3H1Q5TC82 1133 aaKnown RBP12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 RRAGBQ5VZM2 374 aa12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 TYW1BQ6NUM6 668 aa12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 KRT26Q7Z3Y9 468 aa12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 ADGRA1Q86SQ6 560 aa12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 ZBED8Q8IZ13 594 aa12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 LCORLQ8N3X6 602 aa12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 VTI1AQ96AJ9 217 aa12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 CENPTQ96BT3 561 aa12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 FAM161BQ96MY7 647 aa12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 DCUN1D5Q9BTE7 237 aa12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 KLHL4Q9C0H6 718 aa12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 KCNMB3Q9NPA1 279 aa12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 NLRC4Q9NPP4 1024 aa12.95□□□□□ -0.34
CTNNB1-201ENST00000349496 KANSL1LA0AUZ9 987 aa12.94□□□□□ -0.34
CTNNB1-201ENST00000349496 CASQ2O14958 399 aaPredicted RBP12.94□□□□□ -0.34
CTNNB1-201ENST00000349496 RAD51CO43502 376 aa12.94□□□□□ -0.34
CTNNB1-201ENST00000349496 CCDC159P0C7I6 412 aa12.94□□□□□ -0.34
CTNNB1-201ENST00000349496 PTGS2P35354 604 aa12.94□□□□□ -0.34
CTNNB1-201ENST00000349496 ETV3P41162 512 aa12.94□□□□□ -0.34
CTNNB1-201ENST00000349496 ACADVLP49748 655 aa12.94□□□□□ -0.34
CTNNB1-201ENST00000349496 METAP2P50579 478 aaKnown RBP eCLIP12.94□□□□□ -0.346e-8■■■□□ 15.2
CTNNB1-201ENST00000349496 PLCD1P51178 756 aa12.94□□□□□ -0.34
CTNNB1-201ENST00000349496 POLGP54098 1239 aaPredicted RBP12.94□□□□□ -0.34
CTNNB1-201ENST00000349496 NCOA7Q8NI08 942 aa12.94□□□□□ -0.34
CTNNB1-201ENST00000349496 TSNARE1Q96NA8 513 aa12.94□□□□□ -0.34
CTNNB1-201ENST00000349496 A8MX80 341 aa12.94□□□□□ -0.34
CTNNB1-201ENST00000349496 CCRL2O00421 344 aa12.94□□□□□ -0.34
CTNNB1-201ENST00000349496 RANBP6O60518 1105 aaKnown RBP12.94□□□□□ -0.34
CTNNB1-201ENST00000349496 ADAM23O75077 832 aa12.94□□□□□ -0.34
CTNNB1-201ENST00000349496 PAEPP09466 180 aa12.94□□□□□ -0.34
CTNNB1-201ENST00000349496 PABPC1P11940 636 aaKnown RBP12.94□□□□□ -0.34
CTNNB1-201ENST00000349496 KLRK1P26718 216 aa12.94□□□□□ -0.34
CTNNB1-201ENST00000349496 PPARGP37231 505 aaPredicted RBP12.94□□□□□ -0.34
CTNNB1-201ENST00000349496 EIF3BP55884 814 aaKnown RBP12.94□□□□□ -0.34
CTNNB1-201ENST00000349496 EHHADHQ08426 723 aa12.94□□□□□ -0.34
CTNNB1-201ENST00000349496 ZNF423Q2M1K9 1284 aa12.94□□□□□ -0.34
CTNNB1-201ENST00000349496 TMEM67Q5HYA8 995 aa12.94□□□□□ -0.34
CTNNB1-201ENST00000349496 USP49Q70CQ1 688 aa12.94□□□□□ -0.34
CTNNB1-201ENST00000349496 NCSTNQ92542 709 aa12.94□□□□□ -0.34
CTNNB1-201ENST00000349496 AZIN2Q96A70 460 aa12.94□□□□□ -0.34
CTNNB1-201ENST00000349496 TMEM206Q9H813 350 aa12.94□□□□□ -0.34
CTNNB1-201ENST00000349496 CEP72Q9P209 647 aa12.94□□□□□ -0.34
CTNNB1-201ENST00000349496 ZSWIM5Q9P217 1185 aa12.94□□□□□ -0.34
CTNNB1-201ENST00000349496 RSPH10B2B2RC85 870 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 BTBD18B2RXH4 712 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 GNPATO15228 680 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 FTCDO95954 541 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 RSPH10BP0C881 870 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 CYP19A1P11511 503 aaPredicted RBP12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 RASA1P20936 1047 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 PRKCIP41743 596 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 TXKP42681 527 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 BLVRAP53004 296 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 AP1B1Q10567 949 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 CMPK2Q5EBM0 449 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 FYB2Q5VWT5 728 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 CCDC62Q6P9F0 684 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 OR7G1Q8NGA0 311 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 FERMT1Q9BQL6 677 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 NT5C3AQ9H0P0 336 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 C10orf88Q9H8K7 445 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 KIAA1586Q9HCI6 787 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 KRT82Q9NSB4 513 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 SERTAD1Q9UHV2 236 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 TTC26A0AVF1 554 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 KRT7P08729 469 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 WEE1P30291 646 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 KRT20P35900 424 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 ETFBP38117 255 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 C21orf59P57076 290 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 KRT81Q14533 505 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 KRT31Q15323 416 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 SNRNP48Q6IEG0 339 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms