RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 ATPAF2Q8N5M1 289 aa24.37■■□□□ 1.49
NPAS3-201ENST00000346562 PRR29P0C7W0 189 aa24.37■■□□□ 1.49
NPAS3-201ENST00000346562 SYDE1Q6ZW31 735 aaPredicted RBP24.37■■□□□ 1.49
NPAS3-201ENST00000346562 TMCO5AQ8N6Q1 288 aa24.37■■□□□ 1.49
NPAS3-201ENST00000346562 NEDD1Q8NHV4 660 aa24.37■■□□□ 1.49
NPAS3-201ENST00000346562 PRR36Q9H6K5 1346 aa24.37■■□□□ 1.49
NPAS3-201ENST00000346562 C19orf81C9J6K1 198 aa24.36■■□□□ 1.49
NPAS3-201ENST00000346562 MRPS25P82663 173 aaKnown RBP24.36■■□□□ 1.49
NPAS3-201ENST00000346562 SNAPC2Q13487 334 aa24.36■■□□□ 1.49
NPAS3-201ENST00000346562 GRAMD4Q6IC98 578 aa24.36■■□□□ 1.49
NPAS3-201ENST00000346562 RCOR2Q8IZ40 523 aa24.36■■□□□ 1.49
NPAS3-201ENST00000346562 TLR2O60603 784 aa24.36■■□□□ 1.49
NPAS3-201ENST00000346562 IL10P22301 178 aa24.36■■□□□ 1.49
NPAS3-201ENST00000346562 KCNA4P22459 653 aa24.36■■□□□ 1.49
NPAS3-201ENST00000346562 COG2Q14746 738 aa24.36■■□□□ 1.49
NPAS3-201ENST00000346562 MMS22LQ6ZRQ5 1243 aa24.36■■□□□ 1.49
NPAS3-201ENST00000346562 STOML1Q9UBI4 398 aa24.36■■□□□ 1.49
NPAS3-201ENST00000346562 SAMD9LQ8IVG5 1584 aa24.36■■□□□ 1.49
NPAS3-201ENST00000346562 FOXP2O15409 715 aa24.36■■□□□ 1.49
NPAS3-201ENST00000346562 GFAPP14136 432 aa24.36■■□□□ 1.49
NPAS3-201ENST00000346562 CASP1P29466 404 aa24.36■■□□□ 1.49
NPAS3-201ENST00000346562 ZFATQ9P243 1243 aa24.36■■□□□ 1.49
NPAS3-201ENST00000346562 BRAFP15056 766 aa24.36■■□□□ 1.49
NPAS3-201ENST00000346562 ARSEP51690 589 aa24.36■■□□□ 1.49
NPAS3-201ENST00000346562 RAP1GDS1P52306 607 aa24.36■■□□□ 1.49
NPAS3-201ENST00000346562 PGBD3Q8N328 593 aa24.36■■□□□ 1.49
NPAS3-201ENST00000346562 WDR35Q9P2L0 1181 aa24.36■■□□□ 1.49
NPAS3-201ENST00000346562 PDXKO00764 312 aa24.36■■□□□ 1.49
NPAS3-201ENST00000346562 TMEM132DQ14C87 1099 aa24.36■■□□□ 1.49
NPAS3-201ENST00000346562 FAM129AQ9BZQ8 928 aa24.36■■□□□ 1.49
NPAS3-201ENST00000346562 SLC38A7Q9NVC3 462 aa24.36■■□□□ 1.49
NPAS3-201ENST00000346562 ACTR2P61160 394 aa24.35■■□□□ 1.49
NPAS3-201ENST00000346562 KIRREL3Q8IZU9 778 aa24.35■■□□□ 1.49
NPAS3-201ENST00000346562 XKR3Q5GH77 459 aa24.35■■□□□ 1.49
NPAS3-201ENST00000346562 AGAP1Q9UPQ3 857 aa24.35■■□□□ 1.49
NPAS3-201ENST00000346562 ZNF263O14978 683 aa24.35■■□□□ 1.49
NPAS3-201ENST00000346562 TRIM49P0CI25 452 aa24.35■■□□□ 1.49
NPAS3-201ENST00000346562 TRIM49CP0CI26 452 aa24.35■■□□□ 1.49
NPAS3-201ENST00000346562 HSPA1AP0DMV8 641 aaKnown RBP24.35■■□□□ 1.49
NPAS3-201ENST00000346562 HSPA1BP0DMV9 641 aaKnown RBP24.35■■□□□ 1.49
NPAS3-201ENST00000346562 CEP55Q53EZ4 464 aa24.35■■□□□ 1.49
NPAS3-201ENST00000346562 NFRKBQ6P4R8 1299 aa24.35■■□□□ 1.49
NPAS3-201ENST00000346562 ANO5Q75V66 913 aa24.35■■□□□ 1.49
NPAS3-201ENST00000346562 LPAR1Q92633 364 aa24.35■■□□□ 1.49
NPAS3-201ENST00000346562 TAF1DQ9H5J8 278 aaPredicted RBP24.35■■□□□ 1.49
NPAS3-201ENST00000346562 POLD4Q9HCU8 107 aa24.35■■□□□ 1.49
NPAS3-201ENST00000346562 DCTN4Q9UJW0 460 aa24.35■■□□□ 1.49
NPAS3-201ENST00000346562 HECW2Q9P2P5 1572 aa24.35■■□□□ 1.49
NPAS3-201ENST00000346562 SLC26A4O43511 780 aa24.35■■□□□ 1.49
NPAS3-201ENST00000346562 MAN1A2O60476 641 aa24.35■■□□□ 1.49
NPAS3-201ENST00000346562 AKT1P31749 480 aa24.35■■□□□ 1.49
NPAS3-201ENST00000346562 BLVRAP53004 296 aa24.35■■□□□ 1.49
NPAS3-201ENST00000346562 GOLPH3LQ9H4A5 285 aa24.35■■□□□ 1.49
NPAS3-201ENST00000346562 NCK2O43639 380 aa24.34■■□□□ 1.49
NPAS3-201ENST00000346562 DGAT1O75907 488 aa24.34■■□□□ 1.49
NPAS3-201ENST00000346562 SERPIND1P05546 499 aa24.34■■□□□ 1.49
NPAS3-201ENST00000346562 AKR1B1P15121 316 aa24.34■■□□□ 1.49
NPAS3-201ENST00000346562 KRT17Q04695 432 aa24.34■■□□□ 1.49
NPAS3-201ENST00000346562 MICALL2Q8IY33 904 aa24.34■■□□□ 1.49
NPAS3-201ENST00000346562 CD4P01730 458 aa24.34■■□□□ 1.49
NPAS3-201ENST00000346562 PDCLQ13371 301 aa24.34■■□□□ 1.49
NPAS3-201ENST00000346562 ARHGEF7Q14155 803 aa24.34■■□□□ 1.49
NPAS3-201ENST00000346562 KCNN4O15554 427 aa24.34■■□□□ 1.49
NPAS3-201ENST00000346562 IGKV5-2P06315 115 aa24.34■■□□□ 1.49
NPAS3-201ENST00000346562 ZNRF3Q9ULT6 936 aa24.34■■□□□ 1.49
NPAS3-201ENST00000346562 KDM6AO15550 1401 aaPredicted RBP24.34■■□□□ 1.49
NPAS3-201ENST00000346562 CYP2C19P33261 490 aa24.34■■□□□ 1.49
NPAS3-201ENST00000346562 GRIN1Q05586 938 aa24.34■■□□□ 1.49
NPAS3-201ENST00000346562 HIF1AQ16665 826 aa24.34■■□□□ 1.49
NPAS3-201ENST00000346562 EPHA10Q5JZY3 1008 aa24.34■■□□□ 1.49
NPAS3-201ENST00000346562 SDE2Q6IQ49 451 aa24.34■■□□□ 1.49
NPAS3-201ENST00000346562 DCP1BQ8IZD4 617 aaKnown RBP24.34■■□□□ 1.49
NPAS3-201ENST00000346562 MUC3BQ9H195 1237 aa24.34■■□□□ 1.49
NPAS3-201ENST00000346562 AARS2Q5JTZ9 985 aaKnown RBP24.34■■□□□ 1.49
NPAS3-201ENST00000346562 PNPLA7Q6ZV29 1317 aa24.34■■□□□ 1.49
NPAS3-201ENST00000346562 ANGPT2O15123 496 aa24.33■■□□□ 1.49
NPAS3-201ENST00000346562 ICA1LQ8NDH6 482 aa24.33■■□□□ 1.49
NPAS3-201ENST00000346562 C18orf8Q96DM3 657 aa24.33■■□□□ 1.49
NPAS3-201ENST00000346562 PAWRQ96IZ0 340 aaKnown RBP24.33■■□□□ 1.49
NPAS3-201ENST00000346562 C1orf54Q8WWF1 131 aa24.33■■□□□ 1.49
NPAS3-201ENST00000346562 ZFYVE19Q96K21 471 aa24.33■■□□□ 1.49
NPAS3-201ENST00000346562 FAM161BQ96MY7 647 aa24.33■■□□□ 1.49
NPAS3-201ENST00000346562 HSPBP1Q9NZL4 362 aa24.33■■□□□ 1.49
NPAS3-201ENST00000346562 HACL1Q9UJ83 578 aa24.33■■□□□ 1.49
NPAS3-201ENST00000346562 CDC27P30260 824 aa24.33■■□□□ 1.49
NPAS3-201ENST00000346562 NCAPHQ15003 741 aa24.33■■□□□ 1.49
NPAS3-201ENST00000346562 SH3BP1Q9Y3L3 701 aa24.33■■□□□ 1.49
NPAS3-201ENST00000346562 H0Y3Z8 333 aa24.33■■□□□ 1.48
NPAS3-201ENST00000346562 GGCXP38435 758 aa24.33■■□□□ 1.48
NPAS3-201ENST00000346562 WDR72Q3MJ13 1102 aa24.33■■□□□ 1.48
NPAS3-201ENST00000346562 ADCK2Q7Z695 626 aa24.33■■□□□ 1.48
NPAS3-201ENST00000346562 GLYCTKQ8IVS8 523 aa24.33■■□□□ 1.48
NPAS3-201ENST00000346562 KRT35Q92764 455 aa24.33■■□□□ 1.48
NPAS3-201ENST00000346562 GRAMD1AQ96CP6 724 aa24.33■■□□□ 1.48
NPAS3-201ENST00000346562 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.33■■□□□ 1.48
NPAS3-201ENST00000346562 A0A1W2PQC6 194 aa24.32■■□□□ 1.48
NPAS3-201ENST00000346562 SSTR3P32745 418 aaPredicted RBP24.32■■□□□ 1.48
NPAS3-201ENST00000346562 RFC5P40937 340 aa24.32■■□□□ 1.48
NPAS3-201ENST00000346562 PRRG1O14668 218 aa24.32■■□□□ 1.48
NPAS3-201ENST00000346562 MAGEB2O15479 319 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms