RNA–Protein interactions for RNA: ENST00000344951.8

CUL3-202, Transcript of cullin 3, humanhuman

TSL 2 BASIC

Gene CUL3, Length 6,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-202ENST00000344951 IFNEQ86WN2 208 aa15.87■□□□□ 0.13
CUL3-202ENST00000344951 SFR1Q86XK3 245 aa15.87■□□□□ 0.13
CUL3-202ENST00000344951 MIER2Q8N344 545 aa15.87■□□□□ 0.13
CUL3-202ENST00000344951 TOPORSQ9NS56 1045 aaPredicted RBP15.87■□□□□ 0.13
CUL3-202ENST00000344951 ZNF197O14709 1029 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 RGS7P49802 495 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 KCNH2Q12809 1159 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 C6orf10Q5SRN2 563 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 POLR3FQ9H1D9 316 aaPredicted RBP15.86■□□□□ 0.13
CUL3-202ENST00000344951 UNC13AQ9UPW8 1703 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.86■□□□□ 0.13
CUL3-202ENST00000344951 PNMA6FA0A0J9YX94 578 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 NMT2O60551 498 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 BRAFP15056 766 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 ARMC6Q6NXE6 501 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 IYDQ6PHW0 289 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 PRMT1Q99873 361 aaKnown RBP15.86■□□□□ 0.13
CUL3-202ENST00000344951 GABBR1Q9UBS5 961 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 PP2D1A8MPX8 630 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 SKAP2O75563 359 aaPredicted RBP15.86■□□□□ 0.13
CUL3-202ENST00000344951 RALAP11233 206 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 SDC4P31431 198 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 GPC5P78333 572 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 COASYQ13057 564 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 PPP1R2P3Q6NXS1 205 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 FGD2Q7Z6J4 655 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 LY9Q9HBG7 655 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 STOML1Q9UBI4 398 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 LEMD3Q9Y2U8 911 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 STK36Q9NRP7 1315 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 USP17L15C9J2P7 530 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 USP17L13C9JLJ4 530 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 USP17L11C9JVI0 530 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 USP17L18D6R9N7 530 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 USP17L22D6RA61 530 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 USP17L17D6RBQ6 530 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 USP17L19D6RCP7 530 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 USP17L20D6RJB6 530 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 ENO1P06733 434 aaKnown RBP15.86■□□□□ 0.13
CUL3-202ENST00000344951 KCNJ6P48051 423 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 USP17L24Q0WX57 530 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 MTM1Q13496 603 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 TSC22D1Q15714 1073 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 MFSD14CQ5VZR4 134 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 USP17L6PQ6QN14 398 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 NLRP10Q86W26 655 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 ZNF614Q8N883 585 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 PKP3Q9Y446 797 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 RASSF10A6NK89 507 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 ZFXP17010 805 aaPredicted RBP15.86■□□□□ 0.13
CUL3-202ENST00000344951 SH2D3CQ8N5H7 860 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 ANKRD7Q92527 254 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 MS4A14Q96JA4 679 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 EXOSC4Q9NPD3 245 aaKnown RBP15.86■□□□□ 0.13
CUL3-202ENST00000344951 TMEM2Q9UHN6 1383 aa15.86■□□□□ 0.13
CUL3-202ENST00000344951 PRRG1O14668 218 aa15.85■□□□□ 0.13
CUL3-202ENST00000344951 TADA2AO75478 443 aa15.85■□□□□ 0.13
CUL3-202ENST00000344951 NR3C1P04150 777 aa15.85■□□□□ 0.13
CUL3-202ENST00000344951 CYBBP04839 570 aa15.85■□□□□ 0.13
CUL3-202ENST00000344951 JADE3Q92613 823 aa15.85■□□□□ 0.13
CUL3-202ENST00000344951 SCAF8Q9UPN6 1271 aaKnown RBP15.85■□□□□ 0.13
CUL3-202ENST00000344951 PRDM15P57071 1507 aaPredicted RBP15.85■□□□□ 0.13
CUL3-202ENST00000344951 DGKIO75912 1065 aa15.85■□□□□ 0.13
CUL3-202ENST00000344951 LTKP29376 864 aa15.85■□□□□ 0.13
CUL3-202ENST00000344951 NCALDP61601 193 aa15.85■□□□□ 0.13
CUL3-202ENST00000344951 PLD3Q8IV08 490 aa15.85■□□□□ 0.13
CUL3-202ENST00000344951 MB21D2Q8IYB1 491 aaPredicted RBP15.85■□□□□ 0.13
CUL3-202ENST00000344951 C17orf80Q9BSJ5 609 aa15.85■□□□□ 0.13
CUL3-202ENST00000344951 PBLDP30039 288 aaPredicted RBP15.85■□□□□ 0.13
CUL3-202ENST00000344951 PFKFB3Q16875 520 aaPredicted RBP15.85■□□□□ 0.13
CUL3-202ENST00000344951 TRIM69Q86WT6 500 aa15.85■□□□□ 0.13
CUL3-202ENST00000344951 RIN3Q8TB24 985 aa15.85■□□□□ 0.13
CUL3-202ENST00000344951 SH2D3AQ9BRG2 576 aa15.85■□□□□ 0.13
CUL3-202ENST00000344951 PIN4Q9Y237 131 aaKnown RBP15.85■□□□□ 0.13
CUL3-202ENST00000344951 TARSL2A2RTX5 802 aaKnown RBP15.85■□□□□ 0.13
CUL3-202ENST00000344951 MLH1P40692 756 aa15.85■□□□□ 0.13
CUL3-202ENST00000344951 RAD51Q06609 339 aa15.85■□□□□ 0.13
CUL3-202ENST00000344951 PLEKHA8Q96JA3 519 aa15.85■□□□□ 0.13
CUL3-202ENST00000344951 MCM8Q9UJA3 840 aa15.85■□□□□ 0.13
CUL3-202ENST00000344951 MIF4GDA9UHW6 222 aaKnown RBP15.85■□□□□ 0.13
CUL3-202ENST00000344951 FGFR4P22455 802 aa15.85■□□□□ 0.13
CUL3-202ENST00000344951 TYK2P29597 1187 aa15.85■□□□□ 0.13
CUL3-202ENST00000344951 KDSRQ06136 332 aa15.85■□□□□ 0.13
CUL3-202ENST00000344951 ZNF473Q8WTR7 871 aaKnown RBP15.85■□□□□ 0.13
CUL3-202ENST00000344951 HES6Q96HZ4 224 aa15.85■□□□□ 0.13
CUL3-202ENST00000344951 ALDH1A1P00352 501 aa15.84■□□□□ 0.13
CUL3-202ENST00000344951 CAPRIN2Q6IMN6 1127 aaKnown RBP15.84■□□□□ 0.13
CUL3-202ENST00000344951 KRT38O76015 456 aa15.84■□□□□ 0.13
CUL3-202ENST00000344951 PDGFRBP09619 1106 aa15.84■□□□□ 0.13
CUL3-202ENST00000344951 TNFAIP2Q03169 654 aa15.84■□□□□ 0.13
CUL3-202ENST00000344951 FAM162AQ96A26 154 aa15.84■□□□□ 0.13
CUL3-202ENST00000344951 NDE1Q9NXR1 346 aa15.84■□□□□ 0.13
CUL3-202ENST00000344951 CPSF1Q10570 1443 aaKnown RBP15.84■□□□□ 0.13
CUL3-202ENST00000344951 METP08581 1390 aa15.84■□□□□ 0.13
CUL3-202ENST00000344951 CAPN1P07384 714 aa15.84■□□□□ 0.13
CUL3-202ENST00000344951 HDAC4P56524 1084 aa15.84■□□□□ 0.13
CUL3-202ENST00000344951 CLEC4FQ8N1N0 589 aa15.84■□□□□ 0.13
CUL3-202ENST00000344951 PNKPQ96T60 521 aa15.84■□□□□ 0.13
CUL3-202ENST00000344951 RNPEPQ9H4A4 650 aa15.84■□□□□ 0.13
CUL3-202ENST00000344951 FAM32AQ9Y421 112 aaKnown RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms