RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 DMGDHQ9UI17 866 aaKnown RBP7.98□□□□□ -1.13
SRFBP1-201ENST00000339397 NOCTQ9UK39 431 aaKnown RBP7.98□□□□□ -1.13
SRFBP1-201ENST00000339397 A0A087WZ62 844 aa7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 H3BRB1 525 aa7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 MEFVO15553 781 aaPredicted RBP7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 BUB1BO60566 1050 aaPredicted RBP7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 N4BP1O75113 896 aaKnown RBP7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 CLSTN1O94985 981 aa7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 PRKCBP05771 671 aa7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 YY1P25490 414 aa7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 COPB2P35606 906 aa7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 CLDN10P78369 228 aa7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 FMO1Q01740 532 aa7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 GRM1Q13255 1194 aa7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 PSMD6Q15008 389 aa7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 DDX1Q92499 740 aaKnown RBP7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 CPB2Q96IY4 423 aa7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 FDXACB1Q9BRP7 624 aaPredicted RBP7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 TINF2Q9BSI4 451 aa7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 CCDC94Q9BW85 323 aaPredicted RBP7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 CXCL16Q9H2A7 254 aa7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 TUT1Q9H6E5 874 aaKnown RBP7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 TMEM134Q9H6X4 195 aa7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 ERAP1Q9NZ08 941 aa7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 GINS2Q9Y248 185 aa7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 NUB1Q9Y5A7 615 aa7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 ZSCAN5CA6NGD5 496 aaPredicted RBP7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 KCNK3O14649 394 aa7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 PMM2O15305 246 aa7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 DYNC1LI2O43237 492 aaPredicted RBP7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 STRNO43815 780 aa7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 HBP1O60381 514 aa7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 TBC1D8O95759 1140 aa7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 PIGRP01833 764 aa7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 GCLCP48506 637 aaPredicted RBP7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 ACVR2BQ13705 512 aa7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 LAMC2Q13753 1193 aa7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 TUBB2AQ13885 445 aa7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 HIC1Q14526 733 aa7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 TRADDQ15628 312 aa7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 MAPK6Q16659 721 aa7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 MARCH8Q5T0T0 291 aa7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 DAAM2Q86T65 1068 aa7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 VPS36Q86VN1 386 aa7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 FAM167AQ96KS9 214 aa7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 NT5C1BQ96P26 610 aa7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 TUBB2BQ9BVA1 445 aa7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 TRIM7Q9C029 511 aa7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 MTMR12Q9C0I1 747 aa7.97□□□□□ -1.13
SRFBP1-201ENST00000339397 GPR25O00155 361 aa7.96□□□□□ -1.13
SRFBP1-201ENST00000339397 TOM1L1O75674 476 aa7.96□□□□□ -1.13
SRFBP1-201ENST00000339397 GH1P01241 217 aa7.96□□□□□ -1.13
SRFBP1-201ENST00000339397 ZBTB48P10074 688 aaPredicted RBP7.96□□□□□ -1.13
SRFBP1-201ENST00000339397 PIK3CAP42336 1068 aa7.96□□□□□ -1.13
SRFBP1-201ENST00000339397 MFAP3P55082 362 aa7.96□□□□□ -1.13
SRFBP1-201ENST00000339397 MXD4Q14582 209 aaPredicted RBP7.96□□□□□ -1.13
SRFBP1-201ENST00000339397 LLGL1Q15334 1064 aa7.96□□□□□ -1.13
SRFBP1-201ENST00000339397 FAM110CQ1W6H9 321 aa7.96□□□□□ -1.13
SRFBP1-201ENST00000339397 CDCA2Q69YH5 1023 aaPredicted RBP7.96□□□□□ -1.13
SRFBP1-201ENST00000339397 AADACL2Q6P093 401 aa7.96□□□□□ -1.13
SRFBP1-201ENST00000339397 PLEKHH3Q7Z736 793 aa7.96□□□□□ -1.13
SRFBP1-201ENST00000339397 MSANTD4Q8NCY6 345 aa7.96□□□□□ -1.13
SRFBP1-201ENST00000339397 CPA5Q8WXQ8 436 aa7.96□□□□□ -1.13
SRFBP1-201ENST00000339397 CDHR5Q9HBB8 845 aa7.96□□□□□ -1.13
SRFBP1-201ENST00000339397 SETD4Q9NVD3 440 aa7.96□□□□□ -1.13
SRFBP1-201ENST00000339397 AKT3Q9Y243 479 aa7.96□□□□□ -1.13
SRFBP1-201ENST00000339397 PLXNA1Q9UIW2 1896 aa7.96□□□□□ -1.13
SRFBP1-201ENST00000339397 H0YCG3 227 aa7.96□□□□□ -1.14
SRFBP1-201ENST00000339397 CYP2B6P20813 491 aa7.96□□□□□ -1.14
SRFBP1-201ENST00000339397 CTGFP29279 349 aa7.96□□□□□ -1.14
SRFBP1-201ENST00000339397 PTENP60484 403 aa7.96□□□□□ -1.14
SRFBP1-201ENST00000339397 MBTD1Q05BQ5 628 aa7.96□□□□□ -1.14
SRFBP1-201ENST00000339397 ZNF394Q53GI3 561 aa7.96□□□□□ -1.14
SRFBP1-201ENST00000339397 SLFN12LQ6IEE8 588 aa7.96□□□□□ -1.14
SRFBP1-201ENST00000339397 TMCO3Q6UWJ1 677 aa7.96□□□□□ -1.14
SRFBP1-201ENST00000339397 PASD1Q8IV76 773 aa7.96□□□□□ -1.14
SRFBP1-201ENST00000339397 PPTC7Q8NI37 304 aa7.96□□□□□ -1.14
SRFBP1-201ENST00000339397 MAP7D2Q96T17 732 aa7.96□□□□□ -1.14
SRFBP1-201ENST00000339397 PARK7Q99497 189 aaKnown RBP7.96□□□□□ -1.14
SRFBP1-201ENST00000339397 MRPL4Q9BYD3 311 aaKnown RBP7.96□□□□□ -1.14
SRFBP1-201ENST00000339397 PTPRHQ9HD43 1115 aa7.96□□□□□ -1.14
SRFBP1-201ENST00000339397 LUC7LQ9NQ29 371 aaKnown RBP7.96□□□□□ -1.14
SRFBP1-201ENST00000339397 SLC45A1Q9Y2W3 748 aa7.96□□□□□ -1.14
SRFBP1-201ENST00000339397 NR2E1Q9Y466 385 aa7.96□□□□□ -1.14
SRFBP1-201ENST00000339397 TMEM110-MUSTN1A8MSY1 372 aa7.96□□□□□ -1.14
SRFBP1-201ENST00000339397 KIF4AO95239 1232 aa7.96□□□□□ -1.14
SRFBP1-201ENST00000339397 CXCL8P10145 99 aa7.96□□□□□ -1.14
SRFBP1-201ENST00000339397 PRLRP16471 622 aa7.96□□□□□ -1.14
SRFBP1-201ENST00000339397 MARCKSL1P49006 195 aa7.96□□□□□ -1.14
SRFBP1-201ENST00000339397 MYL6P60660 151 aa7.96□□□□□ -1.14
SRFBP1-201ENST00000339397 FKBP1BP68106 108 aa7.96□□□□□ -1.14
SRFBP1-201ENST00000339397 ZNF200P98182 395 aaPredicted RBP7.96□□□□□ -1.14
SRFBP1-201ENST00000339397 TFAMQ00059 246 aaKnown RBP7.96□□□□□ -1.14
SRFBP1-201ENST00000339397 LONRF2Q1L5Z9 754 aa7.96□□□□□ -1.14
SRFBP1-201ENST00000339397 BEND6Q5SZJ8 279 aaPredicted RBP7.96□□□□□ -1.14
SRFBP1-201ENST00000339397 C10orf76Q5T2E6 689 aa7.96□□□□□ -1.14
SRFBP1-201ENST00000339397 ATF7IP2Q5U623 682 aa7.96□□□□□ -1.14
SRFBP1-201ENST00000339397 DAB2IPQ5VWQ8 1189 aa7.96□□□□□ -1.14
SRFBP1-201ENST00000339397 OLFML2BQ68BL8 750 aa7.96□□□□□ -1.14
SRFBP1-201ENST00000339397 MTERF4Q7Z6M4 381 aaKnown RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms