RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 CNGA1P29973 690 aa19.35■□□□□ 0.69
CLSTN3-202ENST00000331148 CHKAP35790 457 aa19.35■□□□□ 0.69
CLSTN3-202ENST00000331148 KLC1Q07866 573 aa19.35■□□□□ 0.69
CLSTN3-202ENST00000331148 PPP1R18Q6NYC8 613 aa19.35■□□□□ 0.69
CLSTN3-202ENST00000331148 TMEM154Q6P9G4 183 aa19.35■□□□□ 0.69
CLSTN3-202ENST00000331148 FAM47EQ6ZV65 393 aa19.35■□□□□ 0.69
CLSTN3-202ENST00000331148 MIGA2Q7L4E1 593 aa19.35■□□□□ 0.69
CLSTN3-202ENST00000331148 BORCS6Q96GS4 357 aa19.35■□□□□ 0.69
CLSTN3-202ENST00000331148 RPS6KC1Q96S38 1066 aa19.35■□□□□ 0.69
CLSTN3-202ENST00000331148 HAO1Q9UJM8 370 aa19.35■□□□□ 0.69
CLSTN3-202ENST00000331148 MTUS1Q9ULD2 1270 aa19.35■□□□□ 0.69
CLSTN3-202ENST00000331148 ECEL1O95672 775 aa19.34■□□□□ 0.69
CLSTN3-202ENST00000331148 PYGMP11217 842 aa19.34■□□□□ 0.69
CLSTN3-202ENST00000331148 ALDH3A1P30838 453 aa19.34■□□□□ 0.69
CLSTN3-202ENST00000331148 PTDSS1P48651 473 aaKnown RBP19.34■□□□□ 0.69
CLSTN3-202ENST00000331148 TNIP1Q15025 636 aa19.34■□□□□ 0.69
CLSTN3-202ENST00000331148 SIX1Q15475 284 aaPredicted RBP19.34■□□□□ 0.69
CLSTN3-202ENST00000331148 SEPT14Q6ZU15 432 aa19.34■□□□□ 0.69
CLSTN3-202ENST00000331148 SLC13A5Q86YT5 568 aaPredicted RBP19.34■□□□□ 0.69
CLSTN3-202ENST00000331148 CYP4X1Q8N118 509 aa19.34■□□□□ 0.69
CLSTN3-202ENST00000331148 ZFAND2BQ8WV99 257 aa19.34■□□□□ 0.69
CLSTN3-202ENST00000331148 DNAJC9Q8WXX5 260 aa19.34■□□□□ 0.69
CLSTN3-202ENST00000331148 POP1Q99575 1024 aaKnown RBP19.34■□□□□ 0.69
CLSTN3-202ENST00000331148 DNAJC18Q9H819 358 aa19.34■□□□□ 0.69
CLSTN3-202ENST00000331148 CHKBQ9Y259 395 aa19.34■□□□□ 0.69
CLSTN3-202ENST00000331148 C2CD2Q9Y426 696 aa19.34■□□□□ 0.69
CLSTN3-202ENST00000331148 COMTP21964 271 aa19.34■□□□□ 0.69
CLSTN3-202ENST00000331148 SP100P23497 879 aaPredicted RBP19.34■□□□□ 0.69
CLSTN3-202ENST00000331148 YARSP54577 528 aaKnown RBP19.34■□□□□ 0.69
CLSTN3-202ENST00000331148 SLC5A9Q2M3M2 681 aa19.34■□□□□ 0.69
CLSTN3-202ENST00000331148 WASHC2DQ5SRD0 308 aa19.34■□□□□ 0.69
CLSTN3-202ENST00000331148 CIAPIN1Q6FI81 312 aa19.34■□□□□ 0.69
CLSTN3-202ENST00000331148 LONP2Q86WA8 852 aa19.34■□□□□ 0.69
CLSTN3-202ENST00000331148 KIAA1683Q9H0B3 1180 aa19.34■□□□□ 0.69
CLSTN3-202ENST00000331148 WHRNQ9P202 907 aa19.34■□□□□ 0.69
CLSTN3-202ENST00000331148 ATRNL1Q5VV63 1379 aa19.33■□□□□ 0.69
CLSTN3-202ENST00000331148 TTC4O95801 387 aa19.33■□□□□ 0.68
CLSTN3-202ENST00000331148 SLURP2P0DP57 97 aa19.33■□□□□ 0.68
CLSTN3-202ENST00000331148 PABPC4Q13310 644 aaKnown RBP eCLIP19.33■□□□□ 0.681e-6■■■■■ 56.2
CLSTN3-202ENST00000331148 RHBDF2Q6PJF5 856 aa19.33■□□□□ 0.68
CLSTN3-202ENST00000331148 PPP1R21Q6ZMI0 780 aa19.33■□□□□ 0.68
CLSTN3-202ENST00000331148 C12orf50Q8NA57 414 aaPredicted RBP19.33■□□□□ 0.68
CLSTN3-202ENST00000331148 TBC1D10AQ9BXI6 508 aa19.33■□□□□ 0.68
CLSTN3-202ENST00000331148 LGALS13Q9UHV8 139 aa19.33■□□□□ 0.68
CLSTN3-202ENST00000331148 H0Y3Z8 333 aa19.32■□□□□ 0.68
CLSTN3-202ENST00000331148 TCEA3O75764 348 aa19.32■□□□□ 0.68
CLSTN3-202ENST00000331148 POTEJP0CG39 1038 aa19.32■□□□□ 0.68
CLSTN3-202ENST00000331148 PSMC6P62333 389 aa19.32■□□□□ 0.68
CLSTN3-202ENST00000331148 PDCD2Q16342 344 aaPredicted RBP19.32■□□□□ 0.68
CLSTN3-202ENST00000331148 APBB1IPQ7Z5R6 666 aaPredicted RBP19.32■□□□□ 0.68
CLSTN3-202ENST00000331148 SRRM1Q8IYB3 904 aaKnown RBP19.32■□□□□ 0.68
CLSTN3-202ENST00000331148 FAM186BQ8IYM0 893 aa19.32■□□□□ 0.68
CLSTN3-202ENST00000331148 TTC8Q8TAM2 541 aa19.32■□□□□ 0.68
CLSTN3-202ENST00000331148 STARD13Q9Y3M8 1113 aa19.32■□□□□ 0.68
CLSTN3-202ENST00000331148 SIPA1L1O43166 1804 aa19.32■□□□□ 0.68
CLSTN3-202ENST00000331148 FAM196BA6NMK8 535 aa19.32■□□□□ 0.68
CLSTN3-202ENST00000331148 PPP1R11O60927 126 aaPredicted RBP19.32■□□□□ 0.68
CLSTN3-202ENST00000331148 CETPP11597 493 aa19.32■□□□□ 0.68
CLSTN3-202ENST00000331148 EPHB2P29323 1055 aa19.32■□□□□ 0.68
CLSTN3-202ENST00000331148 FMO5P49326 533 aa19.32■□□□□ 0.68
CLSTN3-202ENST00000331148 KCNA1Q09470 495 aa19.32■□□□□ 0.68
CLSTN3-202ENST00000331148 KIF22Q14807 665 aa19.32■□□□□ 0.68
CLSTN3-202ENST00000331148 CERKLQ49MI3 558 aaPredicted RBP19.32■□□□□ 0.68
CLSTN3-202ENST00000331148 PPP1R15BQ5SWA1 713 aa19.32■□□□□ 0.68
CLSTN3-202ENST00000331148 MTHFD1LQ6UB35 978 aa19.32■□□□□ 0.68
CLSTN3-202ENST00000331148 RNF207Q6ZRF8 634 aa19.32■□□□□ 0.68
CLSTN3-202ENST00000331148 SH3TC2Q8TF17 1288 aa19.32■□□□□ 0.68
CLSTN3-202ENST00000331148 SLC7A6OSQ96CW6 309 aaPredicted RBP19.32■□□□□ 0.68
CLSTN3-202ENST00000331148 LRRC37BQ96QE4 947 aa19.32■□□□□ 0.68
CLSTN3-202ENST00000331148 INTS2Q9H0H0 1204 aaKnown RBP19.32■□□□□ 0.68
CLSTN3-202ENST00000331148 WDR35Q9P2L0 1181 aa19.32■□□□□ 0.68
CLSTN3-202ENST00000331148 ZNF70Q9UC06 446 aaPredicted RBP19.32■□□□□ 0.68
CLSTN3-202ENST00000331148 USH1CQ9Y6N9 552 aa19.32■□□□□ 0.68
CLSTN3-202ENST00000331148 RSPH10B2B2RC85 870 aa19.31■□□□□ 0.68
CLSTN3-202ENST00000331148 MEIS1O00470 390 aa19.31■□□□□ 0.68
CLSTN3-202ENST00000331148 GCNT3O95395 438 aa19.31■□□□□ 0.68
CLSTN3-202ENST00000331148 RSPH10BP0C881 870 aa19.31■□□□□ 0.68
CLSTN3-202ENST00000331148 EIF6P56537 245 aaKnown RBP19.31■□□□□ 0.68
CLSTN3-202ENST00000331148 IL9RQ01113 521 aa19.31■□□□□ 0.68
CLSTN3-202ENST00000331148 KRT17Q04695 432 aa19.31■□□□□ 0.68
CLSTN3-202ENST00000331148 ADCY1Q08828 1119 aa19.31■□□□□ 0.68
CLSTN3-202ENST00000331148 MESDQ14696 234 aa19.31■□□□□ 0.68
CLSTN3-202ENST00000331148 TCEAL1Q15170 157 aa19.31■□□□□ 0.68
CLSTN3-202ENST00000331148 KYNUQ16719 465 aa19.31■□□□□ 0.68
CLSTN3-202ENST00000331148 ASPRV1Q53RT3 343 aa19.31■□□□□ 0.68
CLSTN3-202ENST00000331148 TATDN1Q6P1N9 297 aa19.31■□□□□ 0.68
CLSTN3-202ENST00000331148 MTMR14Q8NCE2 650 aa19.31■□□□□ 0.68
CLSTN3-202ENST00000331148 SLC20A1Q8WUM9 679 aa19.31■□□□□ 0.68
CLSTN3-202ENST00000331148 AGPAT1Q99943 283 aa19.31■□□□□ 0.68
CLSTN3-202ENST00000331148 WNT8AQ9H1J5 351 aa19.31■□□□□ 0.68
CLSTN3-202ENST00000331148 DNAJC17Q9NVM6 304 aaKnown RBP19.31■□□□□ 0.68
CLSTN3-202ENST00000331148 TBK1Q9UHD2 729 aa19.31■□□□□ 0.68
CLSTN3-202ENST00000331148 COL2A1P02458 1487 aaPredicted RBP19.31■□□□□ 0.68
CLSTN3-202ENST00000331148 CLRN2A0PK11 232 aa19.31■□□□□ 0.68
CLSTN3-202ENST00000331148 TCP10L2B9ZVM9 353 aa19.31■□□□□ 0.68
CLSTN3-202ENST00000331148 MUM1Q2TAK8 710 aa19.31■□□□□ 0.68
CLSTN3-202ENST00000331148 CATSPER3Q86XQ3 398 aa19.31■□□□□ 0.68
CLSTN3-202ENST00000331148 LRRC47Q8N1G4 583 aaKnown RBP19.31■□□□□ 0.68
CLSTN3-202ENST00000331148 SYT2Q8N9I0 419 aaPredicted RBP19.31■□□□□ 0.68
CLSTN3-202ENST00000331148 CD101Q93033 1021 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms