RNA–Protein interactions for RNA: ENST00000329305.6

TPM2-201, Transcript of tropomyosin 2, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM2, Length 1,018 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-201ENST00000329305 GBP4Q96PP9 640 aa17.98■□□□□ 0.47
TPM2-201ENST00000329305 HAPLN2Q9GZV7 340 aa17.98■□□□□ 0.47
TPM2-201ENST00000329305 PLEKHA5Q9HAU0 1116 aa17.98■□□□□ 0.47
TPM2-201ENST00000329305 TLR9Q9NR96 1032 aa17.98■□□□□ 0.47
TPM2-201ENST00000329305 SLC38A7Q9NVC3 462 aa17.98■□□□□ 0.47
TPM2-201ENST00000329305 CNTN3Q9P232 1028 aa17.98■□□□□ 0.47
TPM2-201ENST00000329305 SMIM28A0A1B0GU29 152 aa17.97■□□□□ 0.47
TPM2-201ENST00000329305 TISP43B9A030 160 aa17.97■□□□□ 0.47
TPM2-201ENST00000329305 GADD45BO75293 160 aaPredicted RBP17.97■□□□□ 0.47
TPM2-201ENST00000329305 KIF20AO95235 890 aa17.97■□□□□ 0.47
TPM2-201ENST00000329305 LDHAP00338 332 aaKnown RBP17.97■□□□□ 0.47
TPM2-201ENST00000329305 CXCL8P10145 99 aa17.97■□□□□ 0.47
TPM2-201ENST00000329305 GARTP22102 1010 aa17.97■□□□□ 0.47
TPM2-201ENST00000329305 CCDC85BQ15834 202 aaPredicted RBP17.97■□□□□ 0.47
TPM2-201ENST00000329305 PDE12Q6L8Q7 609 aaKnown RBP17.97■□□□□ 0.47
TPM2-201ENST00000329305 ARMCX5Q6P1M9 558 aa17.97■□□□□ 0.47
TPM2-201ENST00000329305 EPM2AIP1Q7L775 607 aaPredicted RBP17.97■□□□□ 0.47
TPM2-201ENST00000329305 GLIS3Q8NEA6 775 aa17.97■□□□□ 0.47
TPM2-201ENST00000329305 MICAL1Q8TDZ2 1067 aa17.97■□□□□ 0.47
TPM2-201ENST00000329305 COLEC11Q9BWP8 271 aa17.97■□□□□ 0.47
TPM2-201ENST00000329305 NSUN3Q9H649 340 aaKnown RBP17.97■□□□□ 0.47
TPM2-201ENST00000329305 PRG3Q9Y2Y8 225 aaPredicted RBP17.97■□□□□ 0.47
TPM2-201ENST00000329305 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.97■□□□□ 0.47
TPM2-201ENST00000329305 KIAA1671Q9BY89 1806 aa17.96■□□□□ 0.47
TPM2-201ENST00000329305 KIAA0391O15091 583 aaKnown RBP17.96■□□□□ 0.47
TPM2-201ENST00000329305 B4GALT3O60512 393 aa17.96■□□□□ 0.47
TPM2-201ENST00000329305 PRPF40AO75400 957 aaKnown RBP17.96■□□□□ 0.47
TPM2-201ENST00000329305 RHOBTB3O94955 611 aa17.96■□□□□ 0.47
TPM2-201ENST00000329305 SMC2O95347 1197 aa17.96■□□□□ 0.47
TPM2-201ENST00000329305 SLC34A2O95436 690 aa17.96■□□□□ 0.47
TPM2-201ENST00000329305 KCNE1P15382 129 aa17.96■□□□□ 0.47
TPM2-201ENST00000329305 TNFSF9P41273 254 aa17.96■□□□□ 0.47
TPM2-201ENST00000329305 SNRPFP62306 86 aaKnown RBP17.96■□□□□ 0.47
TPM2-201ENST00000329305 XKR4Q5GH76 650 aa17.96■□□□□ 0.47
TPM2-201ENST00000329305 ALKAL1Q6UXT8 129 aa17.96■□□□□ 0.47
TPM2-201ENST00000329305 CLEC17AQ6ZS10 378 aa17.96■□□□□ 0.47
TPM2-201ENST00000329305 HS2ST1Q7LGA3 356 aa17.96■□□□□ 0.47
TPM2-201ENST00000329305 CD302Q8IX05 232 aa17.96■□□□□ 0.47
TPM2-201ENST00000329305 NELFCDQ8IXH7 590 aa17.96■□□□□ 0.47
TPM2-201ENST00000329305 SCFD1Q8WVM8 642 aa17.96■□□□□ 0.47
TPM2-201ENST00000329305 UROC1Q96N76 676 aa17.96■□□□□ 0.47
TPM2-201ENST00000329305 PPP1R10Q96QC0 940 aaKnown RBP17.96■□□□□ 0.47
TPM2-201ENST00000329305 ENTPD7Q9NQZ7 604 aa17.96■□□□□ 0.47
TPM2-201ENST00000329305 RMND1Q9NWS8 449 aa17.96■□□□□ 0.47
TPM2-201ENST00000329305 CASTOR2A6NHX0 329 aa17.95■□□□□ 0.46
TPM2-201ENST00000329305 FAM189A1O60320 539 aa17.95■□□□□ 0.46
TPM2-201ENST00000329305 DNAJB1P25685 340 aa17.95■□□□□ 0.46
TPM2-201ENST00000329305 ADSSP30520 456 aa17.95■□□□□ 0.46
TPM2-201ENST00000329305 POU5F1Q01860 360 aaKnown RBP17.95■□□□□ 0.46
TPM2-201ENST00000329305 STK4Q13043 487 aa17.95■□□□□ 0.46
TPM2-201ENST00000329305 PNOCQ13519 176 aa17.95■□□□□ 0.46
TPM2-201ENST00000329305 KCNB1Q14721 858 aa17.95■□□□□ 0.46
TPM2-201ENST00000329305 SKIV2LQ15477 1246 aaKnown RBP17.95■□□□□ 0.46
TPM2-201ENST00000329305 SLC10A6Q3KNW5 377 aa17.95■□□□□ 0.46
TPM2-201ENST00000329305 DDX53Q86TM3 631 aaKnown RBP17.95■□□□□ 0.46
TPM2-201ENST00000329305 TMEM173Q86WV6 379 aaPredicted RBP17.95■□□□□ 0.46
TPM2-201ENST00000329305 FAM212AQ96EL1 285 aa17.95■□□□□ 0.46
TPM2-201ENST00000329305 TSPAN18Q96SJ8 248 aa17.95■□□□□ 0.46
TPM2-201ENST00000329305 TCF25Q9BQ70 676 aa17.95■□□□□ 0.46
TPM2-201ENST00000329305 IKZF4Q9H2S9 585 aa17.95■□□□□ 0.46
TPM2-201ENST00000329305 NGRNQ9NPE2 291 aaKnown RBP17.95■□□□□ 0.46
TPM2-201ENST00000329305 CPSF3Q9UKF6 684 aaKnown RBP17.95■□□□□ 0.46
TPM2-201ENST00000329305 CHD9Q3L8U1 2897 aa17.95■□□□□ 0.46
TPM2-201ENST00000329305 TTC26A0AVF1 554 aa17.94■□□□□ 0.46
TPM2-201ENST00000329305 GOLGA6L22H0YM25 854 aa17.94■□□□□ 0.46
TPM2-201ENST00000329305 XPOTO43592 962 aaKnown RBP17.94■□□□□ 0.46
TPM2-201ENST00000329305 CA8P35219 290 aa17.94■□□□□ 0.46
TPM2-201ENST00000329305 ACOT2P49753 483 aa17.94■□□□□ 0.46
TPM2-201ENST00000329305 HSP90AA2PQ14568 343 aaPredicted RBP17.94■□□□□ 0.46
TPM2-201ENST00000329305 ENOX2Q16206 610 aaKnown RBP17.94■□□□□ 0.46
TPM2-201ENST00000329305 KNOP1Q1ED39 458 aaKnown RBP17.94■□□□□ 0.46
TPM2-201ENST00000329305 BMT2Q1RMZ1 405 aa17.94■□□□□ 0.46
TPM2-201ENST00000329305 ZBTB41Q5SVQ8 909 aa17.94■□□□□ 0.46
TPM2-201ENST00000329305 TMC7Q7Z402 723 aa17.94■□□□□ 0.46
TPM2-201ENST00000329305 ELOA2Q8IYF1 753 aaPredicted RBP17.94■□□□□ 0.46
TPM2-201ENST00000329305 VPS52Q8N1B4 723 aa17.94■□□□□ 0.46
TPM2-201ENST00000329305 KIAA0895Q8NCT3 520 aa17.94■□□□□ 0.46
TPM2-201ENST00000329305 GOLGA5Q8TBA6 731 aa17.94■□□□□ 0.46
TPM2-201ENST00000329305 NOC3LQ8WTT2 800 aaKnown RBP17.94■□□□□ 0.46
TPM2-201ENST00000329305 SMARCE1Q969G3 411 aa17.94■□□□□ 0.46
TPM2-201ENST00000329305 KIF12Q96FN5 646 aa17.94■□□□□ 0.46
TPM2-201ENST00000329305 CBWD1Q9BRT8 395 aa17.94■□□□□ 0.46
TPM2-201ENST00000329305 FAM213AQ9BRX8 229 aa17.94■□□□□ 0.46
TPM2-201ENST00000329305 CXCL16Q9H2A7 254 aa17.94■□□□□ 0.46
TPM2-201ENST00000329305 CGNQ9P2M7 1197 aaKnown RBP17.94■□□□□ 0.46
TPM2-201ENST00000329305 CHD7Q9P2D1 2997 aa17.94■□□□□ 0.46
TPM2-201ENST00000329305 MYO9BQ13459 2157 aa17.93■□□□□ 0.46
TPM2-201ENST00000329305 EXTL3O43909 919 aa17.93■□□□□ 0.46
TPM2-201ENST00000329305 TADA2AO75478 443 aa17.93■□□□□ 0.46
TPM2-201ENST00000329305 IRS1P35568 1242 aa17.93■□□□□ 0.46
TPM2-201ENST00000329305 CAMK1Q14012 370 aa17.93■□□□□ 0.46
TPM2-201ENST00000329305 SMC1AQ14683 1233 aaKnown RBP17.93■□□□□ 0.46
TPM2-201ENST00000329305 NAB2Q15742 525 aa17.93■□□□□ 0.46
TPM2-201ENST00000329305 PLPP4Q5VZY2 271 aa17.93■□□□□ 0.46
TPM2-201ENST00000329305 GPD1LQ8N335 351 aa17.93■□□□□ 0.46
TPM2-201ENST00000329305 BCL7CQ8WUZ0 217 aaPredicted RBP17.93■□□□□ 0.46
TPM2-201ENST00000329305 SAAL1Q96ER3 474 aa17.93■□□□□ 0.46
TPM2-201ENST00000329305 DDX27Q96GQ7 796 aaKnown RBP17.93■□□□□ 0.46
TPM2-201ENST00000329305 ZMAT2Q96NC0 199 aaKnown RBP17.93■□□□□ 0.46
TPM2-201ENST00000329305 GSDMAQ96QA5 445 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms