RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 CYBAP13498 195 aa19.9■□□□□ 0.78
USP39-201ENST00000323701 FERP16591 822 aa19.9■□□□□ 0.78
USP39-201ENST00000323701 TMOD1P28289 359 aa19.9■□□□□ 0.78
USP39-201ENST00000323701 PHKA2P46019 1235 aa19.9■□□□□ 0.78
USP39-201ENST00000323701 KIZQ2M2Z5 673 aa19.9■□□□□ 0.78
USP39-201ENST00000323701 DEFB115Q30KQ5 88 aa19.9■□□□□ 0.78
USP39-201ENST00000323701 SPOPLQ6IQ16 392 aa19.9■□□□□ 0.78
USP39-201ENST00000323701 MPZL3Q6UWV2 235 aa19.9■□□□□ 0.78
USP39-201ENST00000323701 SLC20A1Q8WUM9 679 aa19.9■□□□□ 0.78
USP39-201ENST00000323701 NLRP7Q8WX94 980 aa19.9■□□□□ 0.78
USP39-201ENST00000323701 CDT1Q9H211 546 aa19.9■□□□□ 0.78
USP39-201ENST00000323701 NAGPAQ9UK23 515 aa19.9■□□□□ 0.78
USP39-201ENST00000323701 CPSF3Q9UKF6 684 aaKnown RBP19.9■□□□□ 0.78
USP39-201ENST00000323701 BZW2Q9Y6E2 419 aaKnown RBP19.9■□□□□ 0.78
USP39-201ENST00000323701 HAS3O00219 553 aa19.9■□□□□ 0.78
USP39-201ENST00000323701 ENC1O14682 589 aa19.9■□□□□ 0.78
USP39-201ENST00000323701 PJA2O43164 708 aa19.9■□□□□ 0.78
USP39-201ENST00000323701 POU5F1BQ06416 359 aa19.9■□□□□ 0.78
USP39-201ENST00000323701 ENPEPQ07075 957 aa19.9■□□□□ 0.78
USP39-201ENST00000323701 FSCN1Q16658 493 aaKnown RBP19.9■□□□□ 0.78
USP39-201ENST00000323701 ZNF568Q3ZCX4 644 aa19.9■□□□□ 0.78
USP39-201ENST00000323701 USP37Q86T82 979 aa19.9■□□□□ 0.78
USP39-201ENST00000323701 IFNLR1Q8IU57 520 aaPredicted RBP19.9■□□□□ 0.78
USP39-201ENST00000323701 GLYCTKQ8IVS8 523 aa19.9■□□□□ 0.78
USP39-201ENST00000323701 BRSK2Q8IWQ3 736 aa19.9■□□□□ 0.78
USP39-201ENST00000323701 CTIFO43310 598 aaKnown RBP19.89■□□□□ 0.77
USP39-201ENST00000323701 MOCS3O95396 460 aa19.89■□□□□ 0.77
USP39-201ENST00000323701 CALCAP01258 141 aa19.89■□□□□ 0.77
USP39-201ENST00000323701 HLA-DRAP01903 254 aa19.89■□□□□ 0.77
USP39-201ENST00000323701 ADAM17P78536 824 aa19.89■□□□□ 0.77
USP39-201ENST00000323701 SLC30A5Q8TAD4 765 aa19.89■□□□□ 0.77
USP39-201ENST00000323701 FAM212AQ96EL1 285 aa19.89■□□□□ 0.77
USP39-201ENST00000323701 CGRRF1Q99675 332 aa19.89■□□□□ 0.77
USP39-201ENST00000323701 AP5M1Q9H0R1 490 aa19.89■□□□□ 0.77
USP39-201ENST00000323701 MYO1AQ9UBC5 1043 aa19.89■□□□□ 0.77
USP39-201ENST00000323701 HDAC6Q9UBN7 1215 aa19.89■□□□□ 0.77
USP39-201ENST00000323701 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.89■□□□□ 0.77
USP39-201ENST00000323701 GINS2Q9Y248 185 aa19.89■□□□□ 0.77
USP39-201ENST00000323701 V9GYY5 206 aaPredicted RBP19.89■□□□□ 0.77
USP39-201ENST00000323701 ARF4P18085 180 aaPredicted RBP19.88■□□□□ 0.77
USP39-201ENST00000323701 RFX1P22670 979 aa19.88■□□□□ 0.77
USP39-201ENST00000323701 PSEN2P49810 448 aa19.88■□□□□ 0.77
USP39-201ENST00000323701 CPT1AP50416 773 aa19.88■□□□□ 0.77
USP39-201ENST00000323701 KIF22Q14807 665 aa19.88■□□□□ 0.77
USP39-201ENST00000323701 ZNF710Q8N1W2 664 aa19.88■□□□□ 0.77
USP39-201ENST00000323701 ADAMTS10Q9H324 1103 aa19.88■□□□□ 0.77
USP39-201ENST00000323701 RNF186Q9NXI6 227 aa19.88■□□□□ 0.77
USP39-201ENST00000323701 TNFSF13BQ9Y275 285 aa19.88■□□□□ 0.77
USP39-201ENST00000323701 MYH10P35580 1976 aa19.88■□□□□ 0.77
USP39-201ENST00000323701 NRCAMQ92823 1304 aa19.88■□□□□ 0.77
USP39-201ENST00000323701 MBLAC1A4D2B0 266 aaPredicted RBP19.88■□□□□ 0.77
USP39-201ENST00000323701 TREHO43280 583 aa19.88■□□□□ 0.77
USP39-201ENST00000323701 ALDH1A1P00352 501 aa19.88■□□□□ 0.77
USP39-201ENST00000323701 PGK1P00558 417 aa19.88■□□□□ 0.77
USP39-201ENST00000323701 AKR1A1P14550 325 aa19.88■□□□□ 0.77
USP39-201ENST00000323701 USP8P40818 1118 aa19.88■□□□□ 0.77
USP39-201ENST00000323701 PURAQ00577 322 aaKnown RBP19.88■□□□□ 0.77
USP39-201ENST00000323701 BIRC3Q13489 604 aa19.88■□□□□ 0.77
USP39-201ENST00000323701 FAM187BQ17R55 369 aa19.88■□□□□ 0.77
USP39-201ENST00000323701 TMEM132AQ24JP5 1023 aa19.88■□□□□ 0.77
USP39-201ENST00000323701 ALKBH5Q6P6C2 394 aaKnown RBP19.88■□□□□ 0.77
USP39-201ENST00000323701 SHC3Q92529 594 aa19.88■□□□□ 0.77
USP39-201ENST00000323701 MAP7D2Q96T17 732 aa19.88■□□□□ 0.77
USP39-201ENST00000323701 PDZD7Q9H5P4 517 aa19.88■□□□□ 0.77
USP39-201ENST00000323701 APOBEC3GQ9HC16 384 aaKnown RBP19.88■□□□□ 0.77
USP39-201ENST00000323701 PRMT7Q9NVM4 692 aaPredicted RBP19.88■□□□□ 0.77
USP39-201ENST00000323701 MRFAP1Q9Y605 127 aa19.88■□□□□ 0.77
USP39-201ENST00000323701 UMODL1Q5DID0 1318 aa19.87■□□□□ 0.77
USP39-201ENST00000323701 CYP26A1O43174 497 aa19.87■□□□□ 0.77
USP39-201ENST00000323701 BUB1O43683 1085 aa19.87■□□□□ 0.77
USP39-201ENST00000323701 GPR32O75388 356 aa19.87■□□□□ 0.77
USP39-201ENST00000323701 SGPL1O95470 568 aa19.87■□□□□ 0.77
USP39-201ENST00000323701 C6orf222P0C671 652 aaPredicted RBP19.87■□□□□ 0.77
USP39-201ENST00000323701 ELNP15502 786 aa19.87■□□□□ 0.77
USP39-201ENST00000323701 FAM71AQ8IYT1 594 aa19.87■□□□□ 0.77
USP39-201ENST00000323701 SECISBP2LQ93073 1101 aaKnown RBP19.87■□□□□ 0.77
USP39-201ENST00000323701 NT5C1BQ96P26 610 aa19.87■□□□□ 0.77
USP39-201ENST00000323701 TAS2R14Q9NYV8 317 aa19.87■□□□□ 0.77
USP39-201ENST00000323701 Q9Y3F1 56 aa19.87■□□□□ 0.77
USP39-201ENST00000323701 CTAGE9A4FU28 777 aa19.87■□□□□ 0.77
USP39-201ENST00000323701 RRN3P2A6NIE6 340 aa19.87■□□□□ 0.77
USP39-201ENST00000323701 TSPAN1O60635 241 aa19.87■□□□□ 0.77
USP39-201ENST00000323701 CST3P01034 146 aaPredicted RBP19.87■□□□□ 0.77
USP39-201ENST00000323701 ATP1A1P05023 1023 aaKnown RBP19.87■□□□□ 0.77
USP39-201ENST00000323701 NAB2Q15742 525 aa19.87■□□□□ 0.77
USP39-201ENST00000323701 SLC47A2Q86VL8 602 aa19.87■□□□□ 0.77
USP39-201ENST00000323701 EFCAB13Q8IY85 973 aa19.87■□□□□ 0.77
USP39-201ENST00000323701 SCLT1Q96NL6 688 aa19.87■□□□□ 0.77
USP39-201ENST00000323701 MTMR12Q9C0I1 747 aa19.87■□□□□ 0.77
USP39-201ENST00000323701 DUSP11O75319 330 aaKnown RBP19.86■□□□□ 0.77
USP39-201ENST00000323701 TRPA1O75762 1119 aa19.86■□□□□ 0.77
USP39-201ENST00000323701 CXCL8P10145 99 aa19.86■□□□□ 0.77
USP39-201ENST00000323701 PIK3CAP42336 1068 aa19.86■□□□□ 0.77
USP39-201ENST00000323701 HTRA3P83110 453 aa19.86■□□□□ 0.77
USP39-201ENST00000323701 CACNB2Q08289 660 aaPredicted RBP19.86■□□□□ 0.77
USP39-201ENST00000323701 U2AF1L4Q8WU68 220 aaKnown RBP19.86■□□□□ 0.77
USP39-201ENST00000323701 NAPGQ99747 312 aaPredicted RBP19.86■□□□□ 0.77
USP39-201ENST00000323701 TSGA10Q9BZW7 698 aa19.86■□□□□ 0.77
USP39-201ENST00000323701 ANK1P16157 1881 aa19.86■□□□□ 0.77
USP39-201ENST00000323701 TMCO5BA8MYB1 307 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms