RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 SLIT3O75094 1523 aa4.77□□□□□ -1.65
CNOT1-201ENST00000317147 DIP2BQ9P265 1576 aa4.77□□□□□ -1.65
CNOT1-201ENST00000317147 USF3Q68DE3 2245 aa4.77□□□□□ -1.65
CNOT1-201ENST00000317147 SCN4AP35499 1836 aa4.77□□□□□ -1.65
CNOT1-201ENST00000317147 TCP11X1B4DZS4 312 aa4.77□□□□□ -1.65
CNOT1-201ENST00000317147 EXOSC10Q01780 885 aaKnown RBP4.77□□□□□ -1.65
CNOT1-201ENST00000317147 COBLL1Q53SF7 1204 aa4.77□□□□□ -1.65
CNOT1-201ENST00000317147 RBM20Q5T481 1227 aaKnown RBP4.77□□□□□ -1.65
CNOT1-201ENST00000317147 RNF207Q6ZRF8 634 aa4.77□□□□□ -1.65
CNOT1-201ENST00000317147 GPR141Q7Z602 305 aa4.77□□□□□ -1.65
CNOT1-201ENST00000317147 RAB44Q7Z6P3 723 aaPredicted RBP4.77□□□□□ -1.65
CNOT1-201ENST00000317147 TRIM69Q86WT6 500 aa4.77□□□□□ -1.65
CNOT1-201ENST00000317147 POLR3CQ9BUI4 534 aaPredicted RBP4.77□□□□□ -1.65
CNOT1-201ENST00000317147 TRIM31Q9BZY9 425 aa4.77□□□□□ -1.65
CNOT1-201ENST00000317147 PLGRKTQ9HBL7 147 aa4.77□□□□□ -1.65
CNOT1-201ENST00000317147 TANC2Q9HCD6 1990 aa4.77□□□□□ -1.65
CNOT1-201ENST00000317147 ALKQ9UM73 1620 aa4.77□□□□□ -1.65
CNOT1-201ENST00000317147 GYPCP04921 128 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 CCDC159P0C7I6 412 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 DDX5P17844 614 aaKnown RBP4.76□□□□□ -1.65
CNOT1-201ENST00000317147 AP3M2P53677 418 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 MTTPP55157 894 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 ARPC4P59998 168 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 ABCE1P61221 599 aaKnown RBP4.76□□□□□ -1.65
CNOT1-201ENST00000317147 AP3B2Q13367 1082 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 NAB1Q13506 487 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 ZNF174Q15697 407 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 NET1Q7Z628 596 aaPredicted RBP4.76□□□□□ -1.65
CNOT1-201ENST00000317147 GRPEL2Q8TAA5 225 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 ANKS1AQ92625 1134 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 RMDN1Q96DB5 314 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 AIFM3Q96NN9 605 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 TRIM56Q9BRZ2 755 aaKnown RBP4.76□□□□□ -1.65
CNOT1-201ENST00000317147 EML4Q9HC35 981 aaKnown RBP4.76□□□□□ -1.65
CNOT1-201ENST00000317147 GPAMQ9HCL2 828 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 SSU72Q9NP77 194 aaKnown RBP4.76□□□□□ -1.65
CNOT1-201ENST00000317147 GDF3Q9NR23 364 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 TRMT112Q9UI30 125 aaKnown RBP4.76□□□□□ -1.65
CNOT1-201ENST00000317147 MAP3K13O43283 966 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 MED7O43513 233 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 UNC5CO95185 931 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 SYF2O95926 243 aaKnown RBP4.76□□□□□ -1.65
CNOT1-201ENST00000317147 TBXAS1P24557 533 aaPredicted RBP4.76□□□□□ -1.65
CNOT1-201ENST00000317147 HSD17B3P37058 310 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 INPP1P49441 399 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 MAPK7Q13164 816 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 LETM2Q2VYF4 491 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 PDCD4Q53EL6 469 aaKnown RBP4.76□□□□□ -1.65
CNOT1-201ENST00000317147 RWDD4Q6NW29 188 aaKnown RBP4.76□□□□□ -1.65
CNOT1-201ENST00000317147 TMPRSS6Q8IU80 811 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 FAM9CQ8IZT9 166 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 PDZD8Q8NEN9 1154 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 C19orf60Q96EN9 201 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 DYDC2Q96IM9 177 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 FNBP1Q96RU3 617 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 TMEM109Q9BVC6 243 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 CDCA7Q9BWT1 371 aaPredicted RBP4.76□□□□□ -1.65
CNOT1-201ENST00000317147 BRD8Q9H0E9 1235 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 ANKHQ9HCJ1 492 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 VPS45Q9NRW7 570 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 PANK4Q9NVE7 773 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 C6orf203Q9P0P8 240 aaPredicted RBP4.76□□□□□ -1.65
CNOT1-201ENST00000317147 MBD2Q9UBB5 411 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 RTCBQ9Y3I0 505 aaKnown RBP4.76□□□□□ -1.65
CNOT1-201ENST00000317147 C3P01024 1663 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 A0A087WXM4 84 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 TTC26A0AVF1 554 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 PSTPIP1O43586 416 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 ECM2O94769 699 aaPredicted RBP4.76□□□□□ -1.65
CNOT1-201ENST00000317147 CYP7A1P22680 504 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 HNRNPH3P31942 346 aaKnown RBP4.76□□□□□ -1.65
CNOT1-201ENST00000317147 RXRGP48443 463 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 IFNAR2P48551 515 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 GPC5P78333 572 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 MEA1Q16626 185 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 UGP2Q16851 508 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 MFSD4BQ5TF39 518 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 BTN2A1Q7KYR7 527 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 RIN2Q8WYP3 895 aaPredicted RBP4.76□□□□□ -1.65
CNOT1-201ENST00000317147 ZNF594Q96JF6 807 aaPredicted RBP4.76□□□□□ -1.65
CNOT1-201ENST00000317147 BTBD9Q96Q07 612 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 PLIN2Q99541 437 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 WDR91A4D1P6 747 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 PYGMP11217 842 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 TAC1P20366 129 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 MUTP22033 750 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 PPARAQ07869 468 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 DPYDQ12882 1025 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 ERMARDQ5T6L9 678 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 C1orf228Q6PIY5 440 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 METTL16Q86W50 562 aaKnown RBP4.76□□□□□ -1.65
CNOT1-201ENST00000317147 RNF169Q8NCN4 708 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 MGARPQ8TDB4 240 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 KRT35Q92764 455 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 PNKPQ96T60 521 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 MUC13Q9H3R2 512 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 DMTF1Q9Y222 760 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 USP31Q70CQ4 1352 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 PRUNE2Q8WUY3 3088 aa4.76□□□□□ -1.65
CNOT1-201ENST00000317147 BTBD18B2RXH4 712 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms