RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 MOGSQ13724 837 aa18.43■□□□□ 0.54
SCAMP4-201ENST00000316097 UBAP2Q5T6F2 1119 aaKnown RBP18.43■□□□□ 0.54
SCAMP4-201ENST00000316097 CRELD2Q6UXH1 353 aaPredicted RBP18.43■□□□□ 0.54
SCAMP4-201ENST00000316097 SEPT14Q6ZU15 432 aa18.43■□□□□ 0.54
SCAMP4-201ENST00000316097 NLRX1Q86UT6 975 aa18.43■□□□□ 0.54
SCAMP4-201ENST00000316097 CCDC113Q9H0I3 377 aa18.43■□□□□ 0.54
SCAMP4-201ENST00000316097 TCEAL9Q9UHQ7 104 aa18.43■□□□□ 0.54
SCAMP4-201ENST00000316097 WDR90Q96KV7 1748 aa18.43■□□□□ 0.54
SCAMP4-201ENST00000316097 HIP1RO75146 1068 aa18.42■□□□□ 0.54
SCAMP4-201ENST00000316097 ANP32DO95626 131 aa18.42■□□□□ 0.54
SCAMP4-201ENST00000316097 CYP2C8P10632 490 aa18.42■□□□□ 0.54
SCAMP4-201ENST00000316097 ABCB4P21439 1286 aa18.42■□□□□ 0.54
SCAMP4-201ENST00000316097 SLCO1A2P46721 670 aa18.42■□□□□ 0.54
SCAMP4-201ENST00000316097 SLC8A3P57103 927 aa18.42■□□□□ 0.54
SCAMP4-201ENST00000316097 EPM2AIP1Q7L775 607 aaPredicted RBP18.42■□□□□ 0.54
SCAMP4-201ENST00000316097 FRMD5Q7Z6J6 570 aa18.42■□□□□ 0.54
SCAMP4-201ENST00000316097 DAW1Q8N136 415 aa18.42■□□□□ 0.54
SCAMP4-201ENST00000316097 AGAP11Q8TF27 550 aa18.42■□□□□ 0.54
SCAMP4-201ENST00000316097 MOV10L1Q9BXT6 1211 aaKnown RBP18.42■□□□□ 0.54
SCAMP4-201ENST00000316097 GPRC5CQ9NQ84 441 aa18.42■□□□□ 0.54
SCAMP4-201ENST00000316097 TTC7AQ9ULT0 858 aaPredicted RBP18.42■□□□□ 0.54
SCAMP4-201ENST00000316097 C15orf41Q9Y2V0 281 aa18.42■□□□□ 0.54
SCAMP4-201ENST00000316097 RBBP6Q7Z6E9 1792 aaKnown RBP18.42■□□□□ 0.54
SCAMP4-201ENST00000316097 GOLGA6L10A0A0M3HER8 536 aa18.42■□□□□ 0.54
SCAMP4-201ENST00000316097 CFAP73A6NFT4 308 aa18.42■□□□□ 0.54
SCAMP4-201ENST00000316097 DDX3YO15523 660 aaKnown RBP18.42■□□□□ 0.54
SCAMP4-201ENST00000316097 CNMDO75829 334 aa18.42■□□□□ 0.54
SCAMP4-201ENST00000316097 YWHABP31946 246 aaKnown RBP18.42■□□□□ 0.54
SCAMP4-201ENST00000316097 RIPK1Q13546 671 aa18.42■□□□□ 0.54
SCAMP4-201ENST00000316097 KNOP1Q1ED39 458 aaKnown RBP18.42■□□□□ 0.54
SCAMP4-201ENST00000316097 ODR4Q5SWX8 454 aa18.42■□□□□ 0.54
SCAMP4-201ENST00000316097 WDR78Q5VTH9 848 aa18.42■□□□□ 0.54
SCAMP4-201ENST00000316097 SAMD3Q8N6K7 520 aa18.42■□□□□ 0.54
SCAMP4-201ENST00000316097 SLC35G2Q8TBE7 412 aa18.42■□□□□ 0.54
SCAMP4-201ENST00000316097 GCNT4Q9P109 453 aa18.42■□□□□ 0.54
SCAMP4-201ENST00000316097 UBOX5O94941 541 aa18.41■□□□□ 0.54
SCAMP4-201ENST00000316097 KRT13P13646 458 aa18.41■□□□□ 0.54
SCAMP4-201ENST00000316097 KCNA2P16389 499 aa18.41■□□□□ 0.54
SCAMP4-201ENST00000316097 SOX10P56693 466 aa18.41■□□□□ 0.54
SCAMP4-201ENST00000316097 KCNJ2P63252 427 aa18.41■□□□□ 0.54
SCAMP4-201ENST00000316097 ZDHHC24Q6UX98 284 aa18.41■□□□□ 0.54
SCAMP4-201ENST00000316097 JAMLQ86YT9 394 aa18.41■□□□□ 0.54
SCAMP4-201ENST00000316097 LNX1Q8TBB1 728 aaPredicted RBP18.41■□□□□ 0.54
SCAMP4-201ENST00000316097 PARVGQ9HBI0 331 aa18.41■□□□□ 0.54
SCAMP4-201ENST00000316097 SIX2Q9NPC8 291 aa18.41■□□□□ 0.54
SCAMP4-201ENST00000316097 RBPJLQ9UBG7 517 aa18.41■□□□□ 0.54
SCAMP4-201ENST00000316097 INTUQ9ULD6 942 aa18.41■□□□□ 0.54
SCAMP4-201ENST00000316097 TRPC6Q9Y210 931 aa18.41■□□□□ 0.54
SCAMP4-201ENST00000316097 ANXA13P27216 316 aa18.41■□□□□ 0.54
SCAMP4-201ENST00000316097 RARRES1P49788 294 aa18.41■□□□□ 0.54
SCAMP4-201ENST00000316097 JAM2P57087 298 aa18.41■□□□□ 0.54
SCAMP4-201ENST00000316097 MAB21L3Q8N8X9 362 aa18.41■□□□□ 0.54
SCAMP4-201ENST00000316097 EPS8L3Q8TE67 593 aaKnown RBP18.41■□□□□ 0.54
SCAMP4-201ENST00000316097 FIZ1Q96SL8 496 aa18.41■□□□□ 0.54
SCAMP4-201ENST00000316097 NSRP1Q9H0G5 558 aaKnown RBP18.41■□□□□ 0.54
SCAMP4-201ENST00000316097 MYPNQ86TC9 1320 aa18.41■□□□□ 0.54
SCAMP4-201ENST00000316097 IGSF9BQ9UPX0 1349 aa18.41■□□□□ 0.54
SCAMP4-201ENST00000316097 CXCL11O14625 94 aa18.4■□□□□ 0.54
SCAMP4-201ENST00000316097 AKAP3O75969 853 aa18.4■□□□□ 0.54
SCAMP4-201ENST00000316097 MAPK7Q13164 816 aa18.4■□□□□ 0.54
SCAMP4-201ENST00000316097 SWSAP1Q6NVH7 229 aa18.4■□□□□ 0.54
SCAMP4-201ENST00000316097 GLYCTKQ8IVS8 523 aa18.4■□□□□ 0.54
SCAMP4-201ENST00000316097 SLC10A4Q96EP9 437 aa18.4■□□□□ 0.54
SCAMP4-201ENST00000316097 SEMA4AQ9H3S1 761 aa18.4■□□□□ 0.54
SCAMP4-201ENST00000316097 GABBR1Q9UBS5 961 aa18.4■□□□□ 0.54
SCAMP4-201ENST00000316097 AGTPBP1Q9UPW5 1226 aa18.4■□□□□ 0.54
SCAMP4-201ENST00000316097 PTPRFP10586 1907 aa18.4■□□□□ 0.54
SCAMP4-201ENST00000316097 IQCA1LA6NCM1 817 aa18.4■□□□□ 0.54
SCAMP4-201ENST00000316097 NQO1P15559 274 aaKnown RBP18.4■□□□□ 0.54
SCAMP4-201ENST00000316097 CASP4P49662 377 aa18.4■□□□□ 0.54
SCAMP4-201ENST00000316097 SATB1Q01826 763 aa18.4■□□□□ 0.54
SCAMP4-201ENST00000316097 CCDC38Q502W7 563 aa18.4■□□□□ 0.54
SCAMP4-201ENST00000316097 CYFIP1Q7L576 1253 aa18.4■□□□□ 0.54
SCAMP4-201ENST00000316097 RIOX2Q8IUF8 465 aa18.4■□□□□ 0.54
SCAMP4-201ENST00000316097 ZNF526Q8TF50 670 aaPredicted RBP18.4■□□□□ 0.54
SCAMP4-201ENST00000316097 KCNH4Q9UQ05 1017 aa18.4■□□□□ 0.54
SCAMP4-201ENST00000316097 SOWAHBA6NEL2 793 aa18.39■□□□□ 0.54
SCAMP4-201ENST00000316097 FAM187AA6NFU0 413 aa18.39■□□□□ 0.54
SCAMP4-201ENST00000316097 WDR64B1ANS9 1081 aa18.39■□□□□ 0.54
SCAMP4-201ENST00000316097 KIAA0391O15091 583 aaKnown RBP18.39■□□□□ 0.54
SCAMP4-201ENST00000316097 EVI5O60447 810 aa18.39■□□□□ 0.54
SCAMP4-201ENST00000316097 AGTP01019 485 aa18.39■□□□□ 0.54
SCAMP4-201ENST00000316097 PPIL2Q13356 520 aa18.39■□□□□ 0.54
SCAMP4-201ENST00000316097 GPAT2Q6NUI2 795 aa18.39■□□□□ 0.54
SCAMP4-201ENST00000316097 FAM178BQ8IXR5 827 aa18.39■□□□□ 0.54
SCAMP4-201ENST00000316097 CHST13Q8NET6 341 aa18.39■□□□□ 0.54
SCAMP4-201ENST00000316097 CCHCR1Q8TD31 782 aa18.39■□□□□ 0.54
SCAMP4-201ENST00000316097 RFFLQ8WZ73 363 aa18.39■□□□□ 0.54
SCAMP4-201ENST00000316097 GPRASP2Q96D09 838 aa18.39■□□□□ 0.54
SCAMP4-201ENST00000316097 RRAGCQ9HB90 399 aa18.39■□□□□ 0.54
SCAMP4-201ENST00000316097 ATP8B3O60423 1300 aa18.39■□□□□ 0.53
SCAMP4-201ENST00000316097 TGFB1I1O43294 461 aa18.39■□□□□ 0.53
SCAMP4-201ENST00000316097 ZNF862O60290 1169 aa18.39■□□□□ 0.53
SCAMP4-201ENST00000316097 FERP16591 822 aa18.39■□□□□ 0.53
SCAMP4-201ENST00000316097 FGFR4P22455 802 aa18.39■□□□□ 0.53
SCAMP4-201ENST00000316097 ALDH5A1P51649 535 aaPredicted RBP18.39■□□□□ 0.53
SCAMP4-201ENST00000316097 NCALDP61601 193 aa18.39■□□□□ 0.53
SCAMP4-201ENST00000316097 ADCY2Q08462 1091 aa18.39■□□□□ 0.53
SCAMP4-201ENST00000316097 ZNF268Q14587 947 aaPredicted RBP18.39■□□□□ 0.53
SCAMP4-201ENST00000316097 XKR9Q5GH70 373 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms