RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 AGAP1Q9UPQ3 857 aa16.87■□□□□ 0.29
USP42-201ENST00000306177 FOXP2O15409 715 aa16.87■□□□□ 0.29
USP42-201ENST00000306177 BTBD8Q5XKL5 378 aa16.87■□□□□ 0.29
USP42-201ENST00000306177 MOV10L1Q9BXT6 1211 aaKnown RBP16.87■□□□□ 0.29
USP42-201ENST00000306177 SP110Q9HB58 689 aa16.87■□□□□ 0.29
USP42-201ENST00000306177 SCAF8Q9UPN6 1271 aaKnown RBP16.87■□□□□ 0.29
USP42-201ENST00000306177 HNRNPH2P55795 449 aaKnown RBP16.86■□□□□ 0.29
USP42-201ENST00000306177 NCOA4Q13772 614 aa16.86■□□□□ 0.29
USP42-201ENST00000306177 SGSM1Q2NKQ1 1148 aa16.86■□□□□ 0.29
USP42-201ENST00000306177 PRAMEF18Q5VWM3 479 aa16.86■□□□□ 0.29
USP42-201ENST00000306177 RCOR2Q8IZ40 523 aa16.86■□□□□ 0.29
USP42-201ENST00000306177 CDC26Q8NHZ8 85 aa16.86■□□□□ 0.29
USP42-201ENST00000306177 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.86■□□□□ 0.29
USP42-201ENST00000306177 IRX2Q9BZI1 471 aaPredicted RBP16.86■□□□□ 0.29
USP42-201ENST00000306177 TRIM15Q9C019 465 aa16.86■□□□□ 0.29
USP42-201ENST00000306177 POLLQ9UGP5 575 aa16.86■□□□□ 0.29
USP42-201ENST00000306177 A0A1W2PQJ5 194 aa16.86■□□□□ 0.29
USP42-201ENST00000306177 TNPO2O14787 897 aaKnown RBP16.86■□□□□ 0.29
USP42-201ENST00000306177 GYG2O15488 501 aa16.86■□□□□ 0.29
USP42-201ENST00000306177 LCP1P13796 627 aa16.86■□□□□ 0.29
USP42-201ENST00000306177 HP1BP3Q5SSJ5 553 aaPredicted RBP16.86■□□□□ 0.29
USP42-201ENST00000306177 MKNK1Q9BUB5 465 aa16.86■□□□□ 0.29
USP42-201ENST00000306177 ZFP69BQ9UJL9 534 aa16.86■□□□□ 0.29
USP42-201ENST00000306177 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.86■□□□□ 0.29
USP42-201ENST00000306177 PPP1R12AO14974 1030 aaPredicted RBP16.86■□□□□ 0.29
USP42-201ENST00000306177 MOCS2O96007 188 aaPredicted RBP16.86■□□□□ 0.29
USP42-201ENST00000306177 CDK17Q00537 523 aa16.86■□□□□ 0.29
USP42-201ENST00000306177 NCAPHQ15003 741 aa16.86■□□□□ 0.29
USP42-201ENST00000306177 XRRA1Q6P2D8 792 aa16.86■□□□□ 0.29
USP42-201ENST00000306177 TC2NQ8N9U0 490 aa16.86■□□□□ 0.29
USP42-201ENST00000306177 LRRC1Q9BTT6 524 aa16.86■□□□□ 0.29
USP42-201ENST00000306177 SLIT1O75093 1534 aa16.86■□□□□ 0.29
USP42-201ENST00000306177 PRKCEQ02156 737 aa16.86■□□□□ 0.29
USP42-201ENST00000306177 NSUN2Q08J23 767 aaKnown RBP eCLIP16.86■□□□□ 0.29
USP42-201ENST00000306177 INTUQ9ULD6 942 aa16.86■□□□□ 0.29
USP42-201ENST00000306177 MAGEB2O15479 319 aa16.85■□□□□ 0.29
USP42-201ENST00000306177 ESRRGP62508 458 aa16.85■□□□□ 0.29
USP42-201ENST00000306177 PDE1CQ14123 709 aaPredicted RBP16.85■□□□□ 0.29
USP42-201ENST00000306177 NAB2Q15742 525 aa16.85■□□□□ 0.29
USP42-201ENST00000306177 RASSF3Q86WH2 238 aa16.85■□□□□ 0.29
USP42-201ENST00000306177 GIPC2Q8TF65 315 aa16.85■□□□□ 0.29
USP42-201ENST00000306177 SENP7Q9BQF6 1050 aa16.85■□□□□ 0.29
USP42-201ENST00000306177 DEFB129Q9H1M3 183 aa16.85■□□□□ 0.29
USP42-201ENST00000306177 FHOD1Q9Y613 1164 aa16.85■□□□□ 0.29
USP42-201ENST00000306177 GH1P01241 217 aa16.85■□□□□ 0.29
USP42-201ENST00000306177 EIF3EP60228 445 aaKnown RBP16.85■□□□□ 0.29
USP42-201ENST00000306177 ZC3H18Q86VM9 953 aaKnown RBP16.85■□□□□ 0.29
USP42-201ENST00000306177 ALKBH8Q96BT7 664 aaKnown RBP16.85■□□□□ 0.29
USP42-201ENST00000306177 TGS1Q96RS0 853 aaKnown RBP16.85■□□□□ 0.29
USP42-201ENST00000306177 MLXIPLQ9NP71 852 aa16.85■□□□□ 0.29
USP42-201ENST00000306177 GTSE1Q9NYZ3 720 aa16.85■□□□□ 0.29
USP42-201ENST00000306177 F5H423 210 aaPredicted RBP16.85■□□□□ 0.29
USP42-201ENST00000306177 LMNAP02545 664 aaKnown RBP16.85■□□□□ 0.29
USP42-201ENST00000306177 VSNL1P62760 191 aa16.85■□□□□ 0.29
USP42-201ENST00000306177 ZC2HC1CQ53FD0 456 aaPredicted RBP16.85■□□□□ 0.29
USP42-201ENST00000306177 TMCO4Q5TGY1 634 aa16.85■□□□□ 0.29
USP42-201ENST00000306177 KRT80Q6KB66 452 aa16.85■□□□□ 0.29
USP42-201ENST00000306177 AGBL3Q8NEM8 1001 aa16.85■□□□□ 0.29
USP42-201ENST00000306177 PPME1Q9Y570 386 aa16.85■□□□□ 0.29
USP42-201ENST00000306177 RPS12P25398 132 aaKnown RBP16.85■□□□□ 0.29
USP42-201ENST00000306177 PHEXP78562 749 aa16.85■□□□□ 0.29
USP42-201ENST00000306177 SNAPC2Q13487 334 aa16.85■□□□□ 0.29
USP42-201ENST00000306177 TMEM132DQ14C87 1099 aa16.85■□□□□ 0.29
USP42-201ENST00000306177 SLC30A5Q8TAD4 765 aa16.85■□□□□ 0.29
USP42-201ENST00000306177 SIK2Q9H0K1 926 aa16.85■□□□□ 0.29
USP42-201ENST00000306177 SCOCQ9UIL1 159 aa16.85■□□□□ 0.29
USP42-201ENST00000306177 TRIM33Q9UPN9 1127 aa16.85■□□□□ 0.29
USP42-201ENST00000306177 ZNF185O15231 689 aa16.84■□□□□ 0.29
USP42-201ENST00000306177 CPB1P15086 417 aa16.84■□□□□ 0.29
USP42-201ENST00000306177 GRIN1Q05586 938 aa16.84■□□□□ 0.29
USP42-201ENST00000306177 HIF1AQ16665 826 aa16.84■□□□□ 0.29
USP42-201ENST00000306177 PLA2G4FQ68DD2 849 aa16.84■□□□□ 0.29
USP42-201ENST00000306177 RBBP8NLQ8NC74 664 aaPredicted RBP16.84■□□□□ 0.29
USP42-201ENST00000306177 CPA5Q8WXQ8 436 aa16.84■□□□□ 0.29
USP42-201ENST00000306177 SLC25A27O95847 323 aa16.84■□□□□ 0.29
USP42-201ENST00000306177 STAT4Q14765 748 aa16.84■□□□□ 0.29
USP42-201ENST00000306177 NLRP14Q86W24 1093 aa16.84■□□□□ 0.29
USP42-201ENST00000306177 CCDC124Q96CT7 223 aaKnown RBP16.84■□□□□ 0.29
USP42-201ENST00000306177 SNX9Q9Y5X1 595 aa16.84■□□□□ 0.29
USP42-201ENST00000306177 KIF20BQ96Q89 1820 aa16.84■□□□□ 0.29
USP42-201ENST00000306177 NOP14P78316 857 aaKnown RBP16.84■□□□□ 0.29
USP42-201ENST00000306177 SAMD7Q7Z3H4 446 aa16.84■□□□□ 0.29
USP42-201ENST00000306177 APPL2Q8NEU8 664 aa16.84■□□□□ 0.29
USP42-201ENST00000306177 GANCQ8TET4 914 aa16.84■□□□□ 0.29
USP42-201ENST00000306177 SLC16A10Q8TF71 515 aa16.84■□□□□ 0.29
USP42-201ENST00000306177 ZC3H15Q8WU90 426 aaKnown RBP16.84■□□□□ 0.29
USP42-201ENST00000306177 GTF3C2Q8WUA4 911 aaPredicted RBP16.84■□□□□ 0.29
USP42-201ENST00000306177 POLR3CQ9BUI4 534 aaPredicted RBP16.84■□□□□ 0.29
USP42-201ENST00000306177 TPX2Q9ULW0 747 aaKnown RBP16.84■□□□□ 0.29
USP42-201ENST00000306177 FAF1Q9UNN5 650 aaPredicted RBP16.84■□□□□ 0.29
USP42-201ENST00000306177 POLRMTO00411 1230 aaKnown RBP16.84■□□□□ 0.29
USP42-201ENST00000306177 P4HA2O15460 535 aa16.84■□□□□ 0.29
USP42-201ENST00000306177 PHF2O75151 1096 aa16.84■□□□□ 0.29
USP42-201ENST00000306177 HAUS5O94927 633 aa16.84■□□□□ 0.29
USP42-201ENST00000306177 CHST13Q8NET6 341 aa16.84■□□□□ 0.29
USP42-201ENST00000306177 CCDC138Q96M89 665 aa16.84■□□□□ 0.29
USP42-201ENST00000306177 AGBL1Q96MI9 1066 aa16.84■□□□□ 0.29
USP42-201ENST00000306177 EPAS1Q99814 870 aa16.84■□□□□ 0.29
USP42-201ENST00000306177 RALAP11233 206 aa16.83■□□□□ 0.29
USP42-201ENST00000306177 PID1Q7Z2X4 250 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms