RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 GRHL1Q9NZI5 618 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 PPARGC1AQ9UBK2 798 aaKnown RBP13.85□□□□□ -0.19
TRIM35-201ENST00000305364 MT-ND3P03897 115 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 PTPN4P29074 926 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 LMNB2Q03252 620 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 MTM1Q13496 603 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 COG2Q14746 738 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 WDR44Q5JSH3 913 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 PPP1R18Q6NYC8 613 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 C3orf67Q6ZVT6 689 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 ST13P4Q8IZP2 240 aaPredicted RBP13.85□□□□□ -0.19
TRIM35-201ENST00000305364 DNAJC18Q9H819 358 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 TCRBV7S2A1N4TA0A589 114 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 FAM196BA6NMK8 535 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 ANKRD63C9JTQ0 380 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 VCAM1P19320 739 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 RPA1P27694 616 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 VAMP7P51809 220 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 ZNF543Q08ER8 600 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 THOC5Q13769 683 aaKnown RBP13.85□□□□□ -0.19
TRIM35-201ENST00000305364 TTC27Q6P3X3 843 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 HIPK4Q8NE63 616 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 PYROXD1Q8WU10 500 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 SCG3Q8WXD2 468 aaKnown RBP13.85□□□□□ -0.19
TRIM35-201ENST00000305364 NKX1-2Q9UD57 310 aaPredicted RBP13.85□□□□□ -0.19
TRIM35-201ENST00000305364 STXBP5LQ9Y2K9 1186 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 LRCH1Q9Y2L9 728 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 SPDYE5A6NIY4 337 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 LGR5O75473 907 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 PIK3CAP42336 1068 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 GPS1Q13098 491 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 MDH1BQ5I0G3 518 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 C16orf86Q6ZW13 317 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 CENPUQ71F23 418 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 ANKMY2Q8IV38 441 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 IKZF4Q9H2S9 585 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 RIOX1Q9H6W3 641 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 NINJ2Q9NZG7 142 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 ANKFY1Q9P2R3 1169 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 AJAP1Q9UKB5 411 aaPredicted RBP13.85□□□□□ -0.19
TRIM35-201ENST00000305364 SMG5Q9UPR3 1016 aaKnown RBP13.85□□□□□ -0.19
TRIM35-201ENST00000305364 MYO5AQ9Y4I1 1855 aaKnown RBP13.84□□□□□ -0.19
TRIM35-201ENST00000305364 FOSP01100 380 aaPredicted RBP13.84□□□□□ -0.19
TRIM35-201ENST00000305364 SERPINB6P35237 376 aa13.84□□□□□ -0.19
TRIM35-201ENST00000305364 PDIA2Q13087 525 aaKnown RBP13.84□□□□□ -0.19
TRIM35-201ENST00000305364 BBS9Q3SYG4 887 aa13.84□□□□□ -0.19
TRIM35-201ENST00000305364 WASHC2DQ5SRD0 308 aa13.84□□□□□ -0.19
TRIM35-201ENST00000305364 DCAF12L1Q5VU92 463 aa13.84□□□□□ -0.19
TRIM35-201ENST00000305364 C1orf146Q5VVC0 180 aa13.84□□□□□ -0.19
TRIM35-201ENST00000305364 PALB2Q86YC2 1186 aa13.84□□□□□ -0.19
TRIM35-201ENST00000305364 ART4Q93070 314 aa13.84□□□□□ -0.19
TRIM35-201ENST00000305364 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.84□□□□□ -0.19
TRIM35-201ENST00000305364 GGA1Q9UJY5 639 aa13.84□□□□□ -0.19
TRIM35-201ENST00000305364 CASZ1Q86V15 1759 aa13.84□□□□□ -0.19
TRIM35-201ENST00000305364 MYH7P12883 1935 aa13.84□□□□□ -0.19
TRIM35-201ENST00000305364 MAGEA13PA6NCF6 341 aa13.84□□□□□ -0.19
TRIM35-201ENST00000305364 E7ENQ6 273 aa13.84□□□□□ -0.19
TRIM35-201ENST00000305364 EYA4O95677 639 aa13.84□□□□□ -0.19
TRIM35-201ENST00000305364 ACADSP16219 412 aa13.84□□□□□ -0.19
TRIM35-201ENST00000305364 SMARCA1P28370 1054 aa13.84□□□□□ -0.19
TRIM35-201ENST00000305364 SMC1BQ8NDV3 1235 aa13.84□□□□□ -0.19
TRIM35-201ENST00000305364 HEY2Q9UBP5 337 aa13.84□□□□□ -0.19
TRIM35-201ENST00000305364 MYO3BQ8WXR4 1341 aa13.84□□□□□ -0.19
TRIM35-201ENST00000305364 SGPL1O95470 568 aa13.84□□□□□ -0.19
TRIM35-201ENST00000305364 SF3B3Q15393 1217 aaKnown RBP13.84□□□□□ -0.19
TRIM35-201ENST00000305364 CBWD6Q4V339 395 aa13.84□□□□□ -0.19
TRIM35-201ENST00000305364 CBWD3Q5JTY5 395 aa13.84□□□□□ -0.19
TRIM35-201ENST00000305364 CBWD5Q5RIA9 395 aa13.84□□□□□ -0.19
TRIM35-201ENST00000305364 FNBP1Q96RU3 617 aa13.84□□□□□ -0.19
TRIM35-201ENST00000305364 CHST7Q9NS84 486 aa13.84□□□□□ -0.19
TRIM35-201ENST00000305364 NDE1Q9NXR1 346 aa13.84□□□□□ -0.19
TRIM35-201ENST00000305364 NEU2Q9Y3R4 380 aa13.84□□□□□ -0.19
TRIM35-201ENST00000305364 GTPBP10A4D1E9 387 aaKnown RBP13.83□□□□□ -0.19
TRIM35-201ENST00000305364 SCNN1DP51172 638 aa13.83□□□□□ -0.19
TRIM35-201ENST00000305364 DYNLT1P63172 113 aa13.83□□□□□ -0.19
TRIM35-201ENST00000305364 MFSD5Q6N075 450 aa13.83□□□□□ -0.19
TRIM35-201ENST00000305364 C11orf63Q6NUN7 778 aa13.83□□□□□ -0.19
TRIM35-201ENST00000305364 FOXR2Q6PJQ5 311 aa13.83□□□□□ -0.19
TRIM35-201ENST00000305364 BRINP3Q76B58 766 aa13.83□□□□□ -0.19
TRIM35-201ENST00000305364 SPOCK2Q92563 424 aa13.83□□□□□ -0.19
TRIM35-201ENST00000305364 SLC5A5Q92911 643 aa13.83□□□□□ -0.19
TRIM35-201ENST00000305364 ABTB1Q969K4 478 aaPredicted RBP13.83□□□□□ -0.19
TRIM35-201ENST00000305364 NACC1Q96RE7 527 aa13.83□□□□□ -0.19
TRIM35-201ENST00000305364 KLHL11Q9NVR0 708 aa13.83□□□□□ -0.19
TRIM35-201ENST00000305364 ZMYND8Q9ULU4 1186 aaPredicted RBP13.83□□□□□ -0.19
TRIM35-201ENST00000305364 BCL9LQ86UU0 1499 aa13.83□□□□□ -0.19
TRIM35-201ENST00000305364 KIF1AQ12756 1690 aa13.83□□□□□ -0.2
TRIM35-201ENST00000305364 INHBAP08476 426 aa13.83□□□□□ -0.2
TRIM35-201ENST00000305364 CD58P19256 250 aa13.83□□□□□ -0.2
TRIM35-201ENST00000305364 IRGCQ6NXR0 463 aa13.83□□□□□ -0.2
TRIM35-201ENST00000305364 APLFQ8IW19 511 aaPredicted RBP13.83□□□□□ -0.2
TRIM35-201ENST00000305364 CCDC110Q8TBZ0 833 aa13.83□□□□□ -0.2
TRIM35-201ENST00000305364 GINM1Q9NU53 330 aa13.83□□□□□ -0.2
TRIM35-201ENST00000305364 COG5Q9UP83 839 aa13.83□□□□□ -0.2
TRIM35-201ENST00000305364 NCANO14594 1321 aa13.83□□□□□ -0.2
TRIM35-201ENST00000305364 GJB6O95452 261 aa13.83□□□□□ -0.2
TRIM35-201ENST00000305364 GSTA2P09210 222 aa13.83□□□□□ -0.2
TRIM35-201ENST00000305364 SKIV2L2P42285 1042 aaKnown RBP13.83□□□□□ -0.2
TRIM35-201ENST00000305364 KDSRQ06136 332 aa13.83□□□□□ -0.2
TRIM35-201ENST00000305364 EPC2Q52LR7 807 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms