RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 KLC4Q9NSK0 619 aa14.73□□□□□ -0.05
PRKCB-201ENST00000303531 SMARCAL1Q9NZC9 954 aa14.73□□□□□ -0.05
PRKCB-201ENST00000303531 MYBP10242 640 aa14.73□□□□□ -0.05
PRKCB-201ENST00000303531 SYCP2LQ5T4T6 812 aa14.73□□□□□ -0.05
PRKCB-201ENST00000303531 SLC26A7Q8TE54 656 aa14.73□□□□□ -0.05
PRKCB-201ENST00000303531 RBM12Q9NTZ6 932 aaKnown RBP14.73□□□□□ -0.05
PRKCB-201ENST00000303531 PIK3R2O00459 728 aa14.73□□□□□ -0.05
PRKCB-201ENST00000303531 EFNA5P52803 228 aa14.73□□□□□ -0.05
PRKCB-201ENST00000303531 CCNI2Q6ZMN8 369 aaPredicted RBP14.73□□□□□ -0.05
PRKCB-201ENST00000303531 SYDE1Q6ZW31 735 aaPredicted RBP14.73□□□□□ -0.05
PRKCB-201ENST00000303531 PID1Q7Z2X4 250 aa14.73□□□□□ -0.05
PRKCB-201ENST00000303531 ADAM33Q9BZ11 813 aa14.73□□□□□ -0.05
PRKCB-201ENST00000303531 ABT1Q9ULW3 272 aaKnown RBP14.73□□□□□ -0.05
PRKCB-201ENST00000303531 SUGT1Q9Y2Z0 365 aa14.73□□□□□ -0.05
PRKCB-201ENST00000303531 FDX1P10109 184 aa14.72□□□□□ -0.05
PRKCB-201ENST00000303531 RECQLP46063 649 aaPredicted RBP14.72□□□□□ -0.05
PRKCB-201ENST00000303531 RNF219Q5W0B1 726 aaPredicted RBP14.72□□□□□ -0.05
PRKCB-201ENST00000303531 OR6P1Q8NGX9 317 aa14.72□□□□□ -0.05
PRKCB-201ENST00000303531 UVRAGQ9P2Y5 699 aa14.72□□□□□ -0.05
PRKCB-201ENST00000303531 FHOD1Q9Y613 1164 aa14.72□□□□□ -0.05
PRKCB-201ENST00000303531 STXBP3O00186 592 aa14.72□□□□□ -0.05
PRKCB-201ENST00000303531 CHN1P15882 459 aa14.72□□□□□ -0.05
PRKCB-201ENST00000303531 WDR72Q3MJ13 1102 aa14.72□□□□□ -0.05
PRKCB-201ENST00000303531 APOBEC3FQ8IUX4 373 aaKnown RBP14.72□□□□□ -0.05
PRKCB-201ENST00000303531 RCOR2Q8IZ40 523 aa14.72□□□□□ -0.05
PRKCB-201ENST00000303531 SENP1Q9P0U3 644 aa14.72□□□□□ -0.05
PRKCB-201ENST00000303531 FDPSP14324 419 aaKnown RBP14.72□□□□□ -0.05
PRKCB-201ENST00000303531 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.72□□□□□ -0.05
PRKCB-201ENST00000303531 EPB41L4AQ9HCS5 686 aaPredicted RBP14.72□□□□□ -0.05
PRKCB-201ENST00000303531 SCHIP1Q9P0W5 487 aaPredicted RBP14.72□□□□□ -0.05
PRKCB-201ENST00000303531 TMEM247A6NEH6 219 aa14.72□□□□□ -0.05
PRKCB-201ENST00000303531 KCNN4O15554 427 aa14.72□□□□□ -0.05
PRKCB-201ENST00000303531 KCNA1Q09470 495 aa14.72□□□□□ -0.05
PRKCB-201ENST00000303531 MXD4Q14582 209 aaPredicted RBP14.72□□□□□ -0.05
PRKCB-201ENST00000303531 LONRF1Q17RB8 773 aa14.72□□□□□ -0.05
PRKCB-201ENST00000303531 SZRD1Q7Z422 152 aa14.72□□□□□ -0.05
PRKCB-201ENST00000303531 KIFC3Q9BVG8 833 aa14.72□□□□□ -0.05
PRKCB-201ENST00000303531 OSBPL1AQ9BXW6 950 aa14.72□□□□□ -0.05
PRKCB-201ENST00000303531 SYCE1LA8MT33 242 aa14.72□□□□□ -0.05
PRKCB-201ENST00000303531 ATP9BO43861 1147 aa14.72□□□□□ -0.05
PRKCB-201ENST00000303531 GYPCP04921 128 aa14.72□□□□□ -0.05
PRKCB-201ENST00000303531 PRKCBP05771 671 aa14.72□□□□□ -0.05
PRKCB-201ENST00000303531 ACOT2P49753 483 aa14.72□□□□□ -0.05
PRKCB-201ENST00000303531 ZNF473Q8WTR7 871 aaKnown RBP14.72□□□□□ -0.05
PRKCB-201ENST00000303531 OTUD5Q96G74 571 aa14.72□□□□□ -0.05
PRKCB-201ENST00000303531 TIPINQ9BVW5 301 aa14.72□□□□□ -0.05
PRKCB-201ENST00000303531 PRKAG2Q9UGJ0 569 aa14.72□□□□□ -0.05
PRKCB-201ENST00000303531 ZFATQ9P243 1243 aa14.72□□□□□ -0.05
PRKCB-201ENST00000303531 TAF6LQ9Y6J9 622 aa14.72□□□□□ -0.05
PRKCB-201ENST00000303531 KLK7P49862 253 aa14.71□□□□□ -0.05
PRKCB-201ENST00000303531 LRIG3Q6UXM1 1119 aa14.71□□□□□ -0.05
PRKCB-201ENST00000303531 GANCQ8TET4 914 aa14.71□□□□□ -0.05
PRKCB-201ENST00000303531 C18orf8Q96DM3 657 aa14.71□□□□□ -0.05
PRKCB-201ENST00000303531 WWP1Q9H0M0 922 aa14.71□□□□□ -0.05
PRKCB-201ENST00000303531 YY1AP1Q9H869 796 aa14.71□□□□□ -0.05
PRKCB-201ENST00000303531 ARL2BPQ9Y2Y0 163 aa14.71□□□□□ -0.05
PRKCB-201ENST00000303531 REREQ9P2R6 1566 aa14.71□□□□□ -0.05
PRKCB-201ENST00000303531 PDS5AQ29RF7 1337 aaKnown RBP14.71□□□□□ -0.05
PRKCB-201ENST00000303531 DFFAO00273 331 aa14.71□□□□□ -0.05
PRKCB-201ENST00000303531 ESRRBO95718 433 aa14.71□□□□□ -0.05
PRKCB-201ENST00000303531 NAB2Q15742 525 aa14.71□□□□□ -0.05
PRKCB-201ENST00000303531 ANO5Q75V66 913 aa14.71□□□□□ -0.05
PRKCB-201ENST00000303531 ICA1LQ8NDH6 482 aa14.71□□□□□ -0.05
PRKCB-201ENST00000303531 RBM15Q96T37 977 aaKnown RBP eCLIP14.71□□□□□ -0.05
PRKCB-201ENST00000303531 PXDNLA1KZ92 1463 aa14.71□□□□□ -0.05
PRKCB-201ENST00000303531 PPP1R12AO14974 1030 aaPredicted RBP14.71□□□□□ -0.05
PRKCB-201ENST00000303531 MEFVO15553 781 aaPredicted RBP14.71□□□□□ -0.05
PRKCB-201ENST00000303531 CTDNEP1O95476 244 aa14.71□□□□□ -0.05
PRKCB-201ENST00000303531 CUL3Q13618 768 aa14.71□□□□□ -0.05
PRKCB-201ENST00000303531 TBC1D16Q8TBP0 767 aa14.71□□□□□ -0.05
PRKCB-201ENST00000303531 ZNF512BQ96KM6 892 aaPredicted RBP14.71□□□□□ -0.05
PRKCB-201ENST00000303531 SENP7Q9BQF6 1050 aa14.71□□□□□ -0.05
PRKCB-201ENST00000303531 EIF2AQ9BY44 585 aaKnown RBP14.71□□□□□ -0.05
PRKCB-201ENST00000303531 TMEM117Q9H0C3 514 aa14.71□□□□□ -0.05
PRKCB-201ENST00000303531 UBA6A0AVT1 1052 aaPredicted RBP14.71□□□□□ -0.05
PRKCB-201ENST00000303531 STAT5BP51692 787 aa14.71□□□□□ -0.05
PRKCB-201ENST00000303531 HMGCS2P54868 508 aa14.71□□□□□ -0.06
PRKCB-201ENST00000303531 SESN2P58004 480 aaPredicted RBP14.71□□□□□ -0.06
PRKCB-201ENST00000303531 SNRNP35Q16560 246 aaKnown RBP14.71□□□□□ -0.06
PRKCB-201ENST00000303531 RIN2Q8WYP3 895 aaPredicted RBP14.71□□□□□ -0.06
PRKCB-201ENST00000303531 PGBD4Q96DM1 585 aa14.71□□□□□ -0.06
PRKCB-201ENST00000303531 IL25Q9H293 177 aa14.71□□□□□ -0.06
PRKCB-201ENST00000303531 TSR3Q9UJK0 312 aaKnown RBP14.71□□□□□ -0.06
PRKCB-201ENST00000303531 ACTR2P61160 394 aa14.71□□□□□ -0.06
PRKCB-201ENST00000303531 MTMR2Q13614 643 aa14.71□□□□□ -0.06
PRKCB-201ENST00000303531 TMEM143Q96AN5 459 aa14.71□□□□□ -0.06
PRKCB-201ENST00000303531 CCT8L2Q96SF2 557 aa14.71□□□□□ -0.06
PRKCB-201ENST00000303531 NDUFB10O96000 172 aa14.7□□□□□ -0.06
PRKCB-201ENST00000303531 SLC9A1P19634 815 aa14.7□□□□□ -0.06
PRKCB-201ENST00000303531 ZNF560Q96MR9 790 aa14.7□□□□□ -0.06
PRKCB-201ENST00000303531 EGFL8Q99944 293 aa14.7□□□□□ -0.06
PRKCB-201ENST00000303531 DBR1Q9UK59 544 aaKnown RBP14.7□□□□□ -0.06
PRKCB-201ENST00000303531 EIF3HO15372 352 aaKnown RBP eCLIP14.7□□□□□ -0.06
PRKCB-201ENST00000303531 FOXP2O15409 715 aa14.7□□□□□ -0.06
PRKCB-201ENST00000303531 DGAT1O75907 488 aa14.7□□□□□ -0.06
PRKCB-201ENST00000303531 ALDH18A1P54886 795 aaKnown RBP14.7□□□□□ -0.06
PRKCB-201ENST00000303531 DDIASQ8IXT1 998 aa14.7□□□□□ -0.06
PRKCB-201ENST00000303531 OR2W6PQ8NHA6 318 aa14.7□□□□□ -0.06
PRKCB-201ENST00000303531 A0A0G2JLW4 131 aa14.7□□□□□ -0.06
PRKCB-201ENST00000303531 KIAA0391O15091 583 aaKnown RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms