RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 WNT8AQ9H1J5 351 aa15.63■□□□□ 0.09
COL6A2-201ENST00000300527 PCDHA3Q9Y5H8 950 aa15.63■□□□□ 0.09
COL6A2-201ENST00000300527 USH1CQ9Y6N9 552 aa15.63■□□□□ 0.09
COL6A2-201ENST00000300527 ARAP2Q8WZ64 1704 aa15.63■□□□□ 0.09
COL6A2-201ENST00000300527 IZUMO3Q5VZ72 239 aa15.63■□□□□ 0.09
COL6A2-201ENST00000300527 MTDHQ86UE4 582 aaKnown RBP15.63■□□□□ 0.09
COL6A2-201ENST00000300527 ZSWIM2Q8NEG5 633 aa15.63■□□□□ 0.09
COL6A2-201ENST00000300527 HAUS1Q96CS2 278 aa15.63■□□□□ 0.09
COL6A2-201ENST00000300527 DDX50Q9BQ39 737 aaKnown RBP15.63■□□□□ 0.09
COL6A2-201ENST00000300527 TMEM109Q9BVC6 243 aa15.63■□□□□ 0.09
COL6A2-201ENST00000300527 PRKAG3Q9UGI9 489 aa15.63■□□□□ 0.09
COL6A2-201ENST00000300527 K7ENM7 598 aa15.63■□□□□ 0.09
COL6A2-201ENST00000300527 NVLO15381 856 aaKnown RBP15.63■□□□□ 0.09
COL6A2-201ENST00000300527 MSH4O15457 936 aa15.63■□□□□ 0.09
COL6A2-201ENST00000300527 CDH16O75309 829 aa15.63■□□□□ 0.09
COL6A2-201ENST00000300527 UBTFL6P0CB48 400 aaPredicted RBP15.63■□□□□ 0.09
COL6A2-201ENST00000300527 PECAM1P16284 738 aaPredicted RBP15.63■□□□□ 0.09
COL6A2-201ENST00000300527 MAPK4P31152 587 aa15.63■□□□□ 0.09
COL6A2-201ENST00000300527 CLK2P49760 499 aaKnown RBP15.63■□□□□ 0.09
COL6A2-201ENST00000300527 CLUL1Q15846 466 aa15.63■□□□□ 0.09
COL6A2-201ENST00000300527 C11orf91Q3C1V1 193 aa15.63■□□□□ 0.09
COL6A2-201ENST00000300527 EAPPQ56P03 285 aaPredicted RBP15.63■□□□□ 0.09
COL6A2-201ENST00000300527 FAM43BQ6ZT52 329 aaPredicted RBP15.63■□□□□ 0.09
COL6A2-201ENST00000300527 AGGF1Q8N302 714 aaeCLIP15.63■□□□□ 0.09
COL6A2-201ENST00000300527 ROBO3Q96MS0 1386 aa15.62■□□□□ 0.09
COL6A2-201ENST00000300527 A6NHS1 94 aa15.62■□□□□ 0.09
COL6A2-201ENST00000300527 RRM1P23921 792 aa15.62■□□□□ 0.09
COL6A2-201ENST00000300527 HOXA7P31268 230 aaPredicted RBP15.62■□□□□ 0.09
COL6A2-201ENST00000300527 CPA2P48052 419 aa15.62■□□□□ 0.09
COL6A2-201ENST00000300527 BFSP1Q12934 665 aa15.62■□□□□ 0.09
COL6A2-201ENST00000300527 RNF43Q68DV7 783 aa15.62■□□□□ 0.09
COL6A2-201ENST00000300527 VPS52Q8N1B4 723 aa15.62■□□□□ 0.09
COL6A2-201ENST00000300527 LINC00116Q8NCU8 138 aa15.62■□□□□ 0.09
COL6A2-201ENST00000300527 MCUR1Q96AQ8 359 aa15.62■□□□□ 0.09
COL6A2-201ENST00000300527 TRABDQ9H4I3 376 aa15.62■□□□□ 0.09
COL6A2-201ENST00000300527 A0A1B0GVG6 124 aa15.62■□□□□ 0.09
COL6A2-201ENST00000300527 GNPATO15228 680 aa15.62■□□□□ 0.09
COL6A2-201ENST00000300527 KRT36O76013 467 aa15.62■□□□□ 0.09
COL6A2-201ENST00000300527 SMARCA1P28370 1054 aa15.62■□□□□ 0.09
COL6A2-201ENST00000300527 PKN2Q16513 984 aaKnown RBP15.62■□□□□ 0.09
COL6A2-201ENST00000300527 KHDC1Q4VXA5 237 aaKnown RBP15.62■□□□□ 0.09
COL6A2-201ENST00000300527 PPP1R15BQ5SWA1 713 aa15.62■□□□□ 0.09
COL6A2-201ENST00000300527 DHX38Q92620 1227 aaKnown RBP15.62■□□□□ 0.09
COL6A2-201ENST00000300527 CD209Q9NNX6 404 aa15.62■□□□□ 0.09
COL6A2-201ENST00000300527 ATP6V1C1P21283 382 aa15.62■□□□□ 0.09
COL6A2-201ENST00000300527 RASSF2P50749 326 aa15.62■□□□□ 0.09
COL6A2-201ENST00000300527 CDR2Q01850 454 aa15.62■□□□□ 0.09
COL6A2-201ENST00000300527 ICA1Q05084 483 aa15.62■□□□□ 0.09
COL6A2-201ENST00000300527 PPP3CAQ08209 521 aa15.62■□□□□ 0.09
COL6A2-201ENST00000300527 C11orf63Q6NUN7 778 aa15.62■□□□□ 0.09
COL6A2-201ENST00000300527 RBM15Q96T37 977 aaKnown RBP eCLIP15.62■□□□□ 0.09
COL6A2-201ENST00000300527 HERPUD2Q9BSE4 406 aa15.62■□□□□ 0.09
COL6A2-201ENST00000300527 CFBP00751 764 aa15.61■□□□□ 0.09
COL6A2-201ENST00000300527 IFNB1P01574 187 aa15.61■□□□□ 0.09
COL6A2-201ENST00000300527 ZCCHC18P0CG32 403 aa15.61■□□□□ 0.09
COL6A2-201ENST00000300527 BMP3P12645 472 aa15.61■□□□□ 0.09
COL6A2-201ENST00000300527 PLS3P13797 630 aa15.61■□□□□ 0.09
COL6A2-201ENST00000300527 RPA3P35244 121 aaPredicted RBP15.61■□□□□ 0.09
COL6A2-201ENST00000300527 MRPS35P82673 323 aaKnown RBP15.61■□□□□ 0.09
COL6A2-201ENST00000300527 SPARCL1Q14515 664 aa15.61■□□□□ 0.09
COL6A2-201ENST00000300527 SMC6Q96SB8 1091 aa15.61■□□□□ 0.09
COL6A2-201ENST00000300527 PLVAPQ9BX97 442 aa15.61■□□□□ 0.09
COL6A2-201ENST00000300527 NMRK1Q9NWW6 199 aa15.61■□□□□ 0.09
COL6A2-201ENST00000300527 SERPINB13Q9UIV8 391 aa15.61■□□□□ 0.09
COL6A2-201ENST00000300527 PAPPAQ13219 1627 aa15.61■□□□□ 0.09
COL6A2-201ENST00000300527 GTPBP10A4D1E9 387 aaKnown RBP15.61■□□□□ 0.09
COL6A2-201ENST00000300527 PI4K2BG5E9Z4 385 aa15.61■□□□□ 0.09
COL6A2-201ENST00000300527 CCNB1P14635 433 aa15.61■□□□□ 0.09
COL6A2-201ENST00000300527 ITIH2P19823 946 aa15.61■□□□□ 0.09
COL6A2-201ENST00000300527 RAB27AP51159 221 aa15.61■□□□□ 0.09
COL6A2-201ENST00000300527 RHBDL3P58872 404 aa15.61■□□□□ 0.09
COL6A2-201ENST00000300527 CCDC125Q86Z20 511 aa15.61■□□□□ 0.09
COL6A2-201ENST00000300527 TEX9Q8N6V9 391 aa15.61■□□□□ 0.09
COL6A2-201ENST00000300527 VCXQ9H320 206 aa15.61■□□□□ 0.09
COL6A2-201ENST00000300527 GPR75-ASB3A0A0A6YYF3 556 aa15.6■□□□□ 0.09
COL6A2-201ENST00000300527 EYA4O95677 639 aa15.6■□□□□ 0.09
COL6A2-201ENST00000300527 ZSCAN5DPP0CG00 497 aa15.6■□□□□ 0.09
COL6A2-201ENST00000300527 GNAZP19086 355 aa15.6■□□□□ 0.09
COL6A2-201ENST00000300527 CD58P19256 250 aa15.6■□□□□ 0.09
COL6A2-201ENST00000300527 MKRN3Q13064 507 aaKnown RBP15.6■□□□□ 0.09
COL6A2-201ENST00000300527 MDH1BQ5I0G3 518 aa15.6■□□□□ 0.09
COL6A2-201ENST00000300527 SLFN13Q68D06 897 aa15.6■□□□□ 0.09
COL6A2-201ENST00000300527 DSTYKQ6XUX3 929 aa15.6■□□□□ 0.09
COL6A2-201ENST00000300527 ANKMY2Q8IV38 441 aa15.6■□□□□ 0.09
COL6A2-201ENST00000300527 ETNPPLQ8TBG4 499 aa15.6■□□□□ 0.09
COL6A2-201ENST00000300527 STMN2Q93045 179 aa15.6■□□□□ 0.09
COL6A2-201ENST00000300527 CBWD1Q9BRT8 395 aa15.6■□□□□ 0.09
COL6A2-201ENST00000300527 LRMDAQ9H2I8 198 aa15.6■□□□□ 0.09
COL6A2-201ENST00000300527 DDX4Q9NQI0 724 aaKnown RBP15.6■□□□□ 0.09
COL6A2-201ENST00000300527 SCOCQ9UIL1 159 aa15.6■□□□□ 0.09
COL6A2-201ENST00000300527 ATP9AO75110 1047 aa15.6■□□□□ 0.09
COL6A2-201ENST00000300527 BANF1O75531 89 aa15.6■□□□□ 0.09
COL6A2-201ENST00000300527 ALAS1P13196 640 aa15.6■□□□□ 0.09
COL6A2-201ENST00000300527 KCNA3P22001 575 aa15.6■□□□□ 0.09
COL6A2-201ENST00000300527 SP100P23497 879 aaPredicted RBP15.6■□□□□ 0.09
COL6A2-201ENST00000300527 PIK3CAP42336 1068 aa15.6■□□□□ 0.09
COL6A2-201ENST00000300527 PLCB3Q01970 1234 aa15.6■□□□□ 0.09
COL6A2-201ENST00000300527 SPIRE1Q08AE8 756 aa15.6■□□□□ 0.09
COL6A2-201ENST00000300527 CLEC4GQ6UXB4 293 aa15.6■□□□□ 0.09
COL6A2-201ENST00000300527 NLRP9Q7RTR0 991 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms