RNA–Protein interactions for RNA: ENST00000296786.7

UBLCP1-201, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBLCP1, Length 2,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-201ENST00000296786 MCM3APO60318 1980 aa9.98□□□□□ -0.81
UBLCP1-201ENST00000296786 TCRBV7S2A1N4TA0A589 114 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 SPATA31C2B4DYI2 1134 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 NDUFAB1O14561 156 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 KIAA0391O15091 583 aaKnown RBP9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 MDH1P40925 334 aaKnown RBP9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 PTGIRP43119 386 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 PLTPP55058 493 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 SP2Q02086 613 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 BIRC3Q13489 604 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 GNPTABQ3T906 1256 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 ACAD10Q6JQN1 1059 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 CCDC137Q6PK04 289 aaKnown RBP9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 CATSPERGQ6ZRH7 1159 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 CYFIP1Q7L576 1253 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 FBXO25Q8TCJ0 367 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 ZNF526Q8TF50 670 aaPredicted RBP9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 ZNF516Q92618 1163 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 MAGOHBQ96A72 148 aaKnown RBP9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 C1orf112Q9NSG2 853 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 BCCIPQ9P287 314 aaKnown RBP eCLIP9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 CNOT8Q9UFF9 292 aaKnown RBP9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 PCYOX1Q9UHG3 505 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 PCDHA3Q9Y5H8 950 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 OTOFQ9HC10 1997 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 A0A0G2JMZ2 1700 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 LRRC37A2A6NM11 1700 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 ANK1P16157 1881 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 C19orf81C9J6K1 198 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 ATP2A1O14983 1001 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 STAM2O75886 525 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 ERLIN2O94905 339 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 GGPS1O95749 300 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 SUPT20HL2P0C7V6 817 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 LIG4P49917 911 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 POLGP54098 1239 aaPredicted RBP9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 CORO7P57737 925 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 EMC2Q15006 297 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 CLEC16AQ2KHT3 1053 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 SUPT20HL1Q3ZLR7 823 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 MIS18BP1Q6P0N0 1132 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 ZDHHC24Q6UX98 284 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 C15orf39Q6ZRI6 1047 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 TSPYL1Q9H0U9 437 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 EPN3Q9H201 632 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 RASSF4Q9H2L5 321 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 LRRC4CQ9HCJ2 640 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 EVPLQ92817 2033 aa9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 DICER1Q9UPY3 1922 aaKnown RBP9.97□□□□□ -0.81
UBLCP1-201ENST00000296786 SPDYE16A6NNV3 312 aaPredicted RBP9.96□□□□□ -0.81
UBLCP1-201ENST00000296786 H0YCG3 227 aa9.96□□□□□ -0.81
UBLCP1-201ENST00000296786 FZD9O00144 591 aa9.96□□□□□ -0.81
UBLCP1-201ENST00000296786 EXTL3O43909 919 aa9.96□□□□□ -0.81
UBLCP1-201ENST00000296786 ZC3H11AO75152 810 aaKnown RBP eCLIP9.96□□□□□ -0.81
UBLCP1-201ENST00000296786 TNNI1P19237 187 aa9.96□□□□□ -0.81
UBLCP1-201ENST00000296786 ATP4AP20648 1035 aa9.96□□□□□ -0.81
UBLCP1-201ENST00000296786 RPL21P46778 160 aaKnown RBP9.96□□□□□ -0.81
UBLCP1-201ENST00000296786 DRG2P55039 364 aaKnown RBP9.96□□□□□ -0.81
UBLCP1-201ENST00000296786 WNT7BP56706 349 aa9.96□□□□□ -0.81
UBLCP1-201ENST00000296786 NLRP11P59045 1033 aaKnown RBP9.96□□□□□ -0.81
UBLCP1-201ENST00000296786 PPARDQ03181 441 aa9.96□□□□□ -0.81
UBLCP1-201ENST00000296786 ENPEPQ07075 957 aa9.96□□□□□ -0.81
UBLCP1-201ENST00000296786 PTGISQ16647 500 aa9.96□□□□□ -0.81
UBLCP1-201ENST00000296786 KRT71Q3SY84 523 aa9.96□□□□□ -0.81
UBLCP1-201ENST00000296786 XKR3Q5GH77 459 aa9.96□□□□□ -0.81
UBLCP1-201ENST00000296786 SPDYCQ5MJ68 293 aa9.96□□□□□ -0.81
UBLCP1-201ENST00000296786 ENOSF1Q7L5Y1 443 aa9.96□□□□□ -0.81
UBLCP1-201ENST00000296786 SLC13A5Q86YT5 568 aaPredicted RBP9.96□□□□□ -0.81
UBLCP1-201ENST00000296786 ARFGAP2Q8N6H7 521 aa9.96□□□□□ -0.81
UBLCP1-201ENST00000296786 TMEM143Q96AN5 459 aa9.96□□□□□ -0.81
UBLCP1-201ENST00000296786 GRHL1Q9NZI5 618 aa9.96□□□□□ -0.81
UBLCP1-201ENST00000296786 SSC5DA1L4H1 1573 aa9.96□□□□□ -0.81
UBLCP1-201ENST00000296786 DCDC2CA8MYV0 355 aa9.96□□□□□ -0.82
UBLCP1-201ENST00000296786 PODXLO00592 558 aa9.96□□□□□ -0.82
UBLCP1-201ENST00000296786 UNGP13051 313 aaPredicted RBP9.96□□□□□ -0.82
UBLCP1-201ENST00000296786 ACOT2P49753 483 aa9.96□□□□□ -0.82
UBLCP1-201ENST00000296786 RWDD2BP57060 319 aa9.96□□□□□ -0.82
UBLCP1-201ENST00000296786 CLDN10P78369 228 aa9.96□□□□□ -0.82
UBLCP1-201ENST00000296786 IFFO1Q0D2I5 559 aa9.96□□□□□ -0.82
UBLCP1-201ENST00000296786 STRN3Q13033 797 aa9.96□□□□□ -0.82
UBLCP1-201ENST00000296786 SIX1Q15475 284 aaPredicted RBP9.96□□□□□ -0.82
UBLCP1-201ENST00000296786 CYP1B1Q16678 543 aa9.96□□□□□ -0.82
UBLCP1-201ENST00000296786 ODF2Q5BJF6 829 aa9.96□□□□□ -0.82
UBLCP1-201ENST00000296786 AGBL2Q5U5Z8 902 aa9.96□□□□□ -0.82
UBLCP1-201ENST00000296786 APOBEC3FQ8IUX4 373 aaKnown RBP9.96□□□□□ -0.82
UBLCP1-201ENST00000296786 CCDC105Q8IYK2 499 aa9.96□□□□□ -0.82
UBLCP1-201ENST00000296786 KLRG1Q96E93 195 aa9.96□□□□□ -0.82
UBLCP1-201ENST00000296786 FNBP1Q96RU3 617 aa9.96□□□□□ -0.82
UBLCP1-201ENST00000296786 EPB41L4BQ9H329 900 aa9.96□□□□□ -0.82
UBLCP1-201ENST00000296786 SLC12A6Q9UHW9 1150 aa9.96□□□□□ -0.82
UBLCP1-201ENST00000296786 ANAPC7Q9UJX3 599 aa9.96□□□□□ -0.82
UBLCP1-201ENST00000296786 AGO2Q9UKV8 859 aaKnown RBP9.96□□□□□ -0.82
UBLCP1-201ENST00000296786 MTUS1Q9ULD2 1270 aa9.96□□□□□ -0.82
UBLCP1-201ENST00000296786 NOVA2Q9UNW9 492 aaKnown RBP9.96□□□□□ -0.82
UBLCP1-201ENST00000296786 PTPN22Q9Y2R2 807 aa9.96□□□□□ -0.82
UBLCP1-201ENST00000296786 PTPRJQ12913 1337 aa9.95□□□□□ -0.82
UBLCP1-201ENST00000296786 MYPNQ86TC9 1320 aa9.95□□□□□ -0.82
UBLCP1-201ENST00000296786 ZNF541Q9H0D2 1346 aa9.95□□□□□ -0.82
UBLCP1-201ENST00000296786 HLA-DRAP01903 254 aa9.95□□□□□ -0.82
UBLCP1-201ENST00000296786 RARAP10276 462 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms