RNA–Protein interactions for RNA: ENST00000283228.6

PTPRR-201, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRR, Length 3,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-201ENST00000283228 COG5Q9UP83 839 aa12.12□□□□□ -0.47
PTPRR-201ENST00000283228 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.12□□□□□ -0.47
PTPRR-201ENST00000283228 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.12□□□□□ -0.47
PTPRR-201ENST00000283228 COQ9O75208 318 aa12.12□□□□□ -0.47
PTPRR-201ENST00000283228 VCAM1P19320 739 aa12.12□□□□□ -0.47
PTPRR-201ENST00000283228 RPL13P26373 211 aaKnown RBP12.12□□□□□ -0.47
PTPRR-201ENST00000283228 RGS9BPQ6ZS82 235 aa12.12□□□□□ -0.47
PTPRR-201ENST00000283228 SLC13A5Q86YT5 568 aaPredicted RBP12.12□□□□□ -0.47
PTPRR-201ENST00000283228 RBM12BQ8IXT5 1001 aaKnown RBP12.12□□□□□ -0.47
PTPRR-201ENST00000283228 KBTBD2Q8IY47 623 aa12.12□□□□□ -0.47
PTPRR-201ENST00000283228 SLC20A1Q8WUM9 679 aa12.12□□□□□ -0.47
PTPRR-201ENST00000283228 CCDC124Q96CT7 223 aaKnown RBP12.12□□□□□ -0.47
PTPRR-201ENST00000283228 CCDC97Q96F63 343 aaPredicted RBP12.12□□□□□ -0.47
PTPRR-201ENST00000283228 ZSWIM1Q9BR11 485 aa12.12□□□□□ -0.47
PTPRR-201ENST00000283228 DDX25Q9UHL0 483 aaKnown RBP12.12□□□□□ -0.47
PTPRR-201ENST00000283228 ANAPC4Q9UJX5 808 aa12.12□□□□□ -0.47
PTPRR-201ENST00000283228 POTEFA5A3E0 1075 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 POTEIP0CG38 1075 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 VAV1P15498 845 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 PKN2Q16513 984 aaKnown RBP12.11□□□□□ -0.47
PTPRR-201ENST00000283228 POTEGQ6S5H5 508 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 POTEEQ6S8J3 1075 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 ART4Q93070 314 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 NSL1Q96IY1 281 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 CLPTM1LQ96KA5 538 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 RIOK1Q9BRS2 568 aaKnown RBP12.11□□□□□ -0.47
PTPRR-201ENST00000283228 PHF24Q9UPV7 400 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 ZWINTO95229 277 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 NR3C1P04150 777 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 MAGEA8P43361 318 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 ADCY7P51828 1080 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 DRG2P55039 364 aaKnown RBP12.11□□□□□ -0.47
PTPRR-201ENST00000283228 AP1B1Q10567 949 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 PDIA5Q14554 519 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 GRAMD1BQ3KR37 738 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 MARK2Q7KZI7 788 aaKnown RBP12.11□□□□□ -0.47
PTPRR-201ENST00000283228 OTOAQ7RTW8 1153 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 CLNKQ7Z7G1 428 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 RFWD2Q8NHY2 731 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 PIP4K2CQ8TBX8 421 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 SNF8Q96H20 258 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 BRIP1Q9BX63 1249 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 TRAF3IP3Q9Y228 551 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 STARD13Q9Y3M8 1113 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 A0A0A6YYK5 440 aaPredicted RBP12.11□□□□□ -0.47
PTPRR-201ENST00000283228 GOLGA8SH3BPF8 625 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 GOLGA8MH3BSY2 632 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 GSC2O15499 205 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 DNAJC6O75061 913 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 EEF2P13639 858 aaKnown RBP12.11□□□□□ -0.47
PTPRR-201ENST00000283228 SERPINB6P35237 376 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 OCRLQ01968 901 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 CCDC15Q0P6D6 951 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 GIT2Q14161 759 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 ARHGAP27Q6ZUM4 889 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 SATL1Q86VE3 508 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 DGKHQ86XP1 1220 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 FAM186BQ8IYM0 893 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 TTC17Q96AE7 1141 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 RBM17Q96I25 401 aaKnown RBP12.11□□□□□ -0.47
PTPRR-201ENST00000283228 TMEM47Q9BQJ4 181 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 TRIM55Q9BYV6 548 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 MIS12Q9H081 205 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 PPARGC1AQ9UBK2 798 aaKnown RBP12.11□□□□□ -0.47
PTPRR-201ENST00000283228 MAD2L2Q9UI95 211 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 TMCO1Q9UM00 188 aa12.11□□□□□ -0.47
PTPRR-201ENST00000283228 CYP1A1P04798 512 aaPredicted RBP12.1□□□□□ -0.47
PTPRR-201ENST00000283228 IL2RBP14784 551 aa12.1□□□□□ -0.47
PTPRR-201ENST00000283228 FGFR2P21802 821 aa12.1□□□□□ -0.47
PTPRR-201ENST00000283228 EPHB1P54762 984 aa12.1□□□□□ -0.47
PTPRR-201ENST00000283228 INHBCP55103 352 aa12.1□□□□□ -0.47
PTPRR-201ENST00000283228 MED21Q13503 144 aa12.1□□□□□ -0.47
PTPRR-201ENST00000283228 CLUL1Q15846 466 aa12.1□□□□□ -0.47
PTPRR-201ENST00000283228 WDR72Q3MJ13 1102 aa12.1□□□□□ -0.47
PTPRR-201ENST00000283228 TMEM109Q9BVC6 243 aa12.1□□□□□ -0.47
PTPRR-201ENST00000283228 PLVAPQ9BX97 442 aa12.1□□□□□ -0.47
PTPRR-201ENST00000283228 CHST7Q9NS84 486 aa12.1□□□□□ -0.47
PTPRR-201ENST00000283228 FAF1Q9UNN5 650 aaPredicted RBP12.1□□□□□ -0.47
PTPRR-201ENST00000283228 MIF4GDA9UHW6 222 aaKnown RBP12.1□□□□□ -0.47
PTPRR-201ENST00000283228 TRPA1O75762 1119 aa12.1□□□□□ -0.47
PTPRR-201ENST00000283228 IFNB1P01574 187 aa12.1□□□□□ -0.47
PTPRR-201ENST00000283228 OATP04181 439 aa12.1□□□□□ -0.47
PTPRR-201ENST00000283228 KITP10721 976 aa12.1□□□□□ -0.47
PTPRR-201ENST00000283228 PSMC4P43686 418 aa12.1□□□□□ -0.47
PTPRR-201ENST00000283228 PLCB3Q01970 1234 aa12.1□□□□□ -0.47
PTPRR-201ENST00000283228 GRM4Q14833 912 aa12.1□□□□□ -0.47
PTPRR-201ENST00000283228 R3HDM1Q15032 1099 aaKnown RBP12.1□□□□□ -0.47
PTPRR-201ENST00000283228 IZUMO3Q5VZ72 239 aa12.1□□□□□ -0.47
PTPRR-201ENST00000283228 ZDHHC14Q8IZN3 488 aa12.1□□□□□ -0.47
PTPRR-201ENST00000283228 ZNF653Q96CK0 615 aa12.1□□□□□ -0.47
PTPRR-201ENST00000283228 DNAJC19Q96DA6 116 aa12.1□□□□□ -0.47
PTPRR-201ENST00000283228 RBM15Q96T37 977 aaKnown RBP eCLIP12.1□□□□□ -0.47
PTPRR-201ENST00000283228 TYW1Q9NV66 732 aaKnown RBP12.1□□□□□ -0.47
PTPRR-201ENST00000283228 PAIP2BQ9ULR5 123 aaKnown RBP12.1□□□□□ -0.47
PTPRR-201ENST00000283228 USTQ9Y2C2 406 aa12.1□□□□□ -0.47
PTPRR-201ENST00000283228 TDRKHQ9Y2W6 561 aaKnown RBP12.1□□□□□ -0.47
PTPRR-201ENST00000283228 POTEJP0CG39 1038 aa12.1□□□□□ -0.47
PTPRR-201ENST00000283228 ACVR2BQ13705 512 aa12.1□□□□□ -0.47
PTPRR-201ENST00000283228 PDE1CQ14123 709 aaPredicted RBP12.1□□□□□ -0.47
PTPRR-201ENST00000283228 SLC1A5Q15758 541 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms