RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 HVCN1Q96D96 273 aa14.82□□□□□ -0.04
CDH3-201ENST00000264012 ATP6V1G3Q96LB4 118 aa14.82□□□□□ -0.04
CDH3-201ENST00000264012 CACYBPQ9HB71 228 aaKnown RBP14.82□□□□□ -0.04
CDH3-201ENST00000264012 MLXIPLQ9NP71 852 aa14.82□□□□□ -0.04
CDH3-201ENST00000264012 BAG5Q9UL15 447 aa14.82□□□□□ -0.04
CDH3-201ENST00000264012 TMX2Q9Y320 296 aa14.82□□□□□ -0.04
CDH3-201ENST00000264012 ZWINTO95229 277 aa14.82□□□□□ -0.04
CDH3-201ENST00000264012 ESRRAP11474 423 aaPredicted RBP14.82□□□□□ -0.04
CDH3-201ENST00000264012 LCP1P13796 627 aa14.82□□□□□ -0.04
CDH3-201ENST00000264012 NOP14P78316 857 aaKnown RBP14.82□□□□□ -0.04
CDH3-201ENST00000264012 ST3GAL1Q11201 340 aa14.82□□□□□ -0.04
CDH3-201ENST00000264012 ATP11CQ8NB49 1132 aa14.82□□□□□ -0.04
CDH3-201ENST00000264012 KLHL11Q9NVR0 708 aa14.82□□□□□ -0.04
CDH3-201ENST00000264012 WDR35Q9P2L0 1181 aa14.82□□□□□ -0.04
CDH3-201ENST00000264012 A0A0G2JND7 137 aa14.82□□□□□ -0.04
CDH3-201ENST00000264012 RSPH10B2B2RC85 870 aa14.82□□□□□ -0.04
CDH3-201ENST00000264012 F5H423 210 aaPredicted RBP14.82□□□□□ -0.04
CDH3-201ENST00000264012 CTIFO43310 598 aaKnown RBP14.82□□□□□ -0.04
CDH3-201ENST00000264012 RSPH10BP0C881 870 aa14.82□□□□□ -0.04
CDH3-201ENST00000264012 ACTR2P61160 394 aa14.82□□□□□ -0.04
CDH3-201ENST00000264012 ATF7IP2Q5U623 682 aa14.82□□□□□ -0.04
CDH3-201ENST00000264012 IER5Q5VY09 327 aa14.82□□□□□ -0.04
CDH3-201ENST00000264012 SYN2Q92777 582 aaPredicted RBP14.82□□□□□ -0.04
CDH3-201ENST00000264012 KIFC3Q9BVG8 833 aa14.82□□□□□ -0.04
CDH3-201ENST00000264012 TRIM55Q9BYV6 548 aa14.82□□□□□ -0.04
CDH3-201ENST00000264012 Q9H521 79 aa14.82□□□□□ -0.04
CDH3-201ENST00000264012 H3BRJ5 948 aa14.81□□□□□ -0.04
CDH3-201ENST00000264012 KIAA1755Q5JYT7 1200 aa14.81□□□□□ -0.04
CDH3-201ENST00000264012 SIK2Q9H0K1 926 aa14.81□□□□□ -0.04
CDH3-201ENST00000264012 PLAGL2Q9UPG8 496 aa14.81□□□□□ -0.04
CDH3-201ENST00000264012 EXTL3O43909 919 aa14.81□□□□□ -0.04
CDH3-201ENST00000264012 MOCS2O96007 188 aaPredicted RBP14.81□□□□□ -0.04
CDH3-201ENST00000264012 TMEM253P0C7T8 217 aa14.81□□□□□ -0.04
CDH3-201ENST00000264012 RARBP10826 455 aa14.81□□□□□ -0.04
CDH3-201ENST00000264012 KLRC1P26715 233 aa14.81□□□□□ -0.04
CDH3-201ENST00000264012 AP1B1Q10567 949 aa14.81□□□□□ -0.04
CDH3-201ENST00000264012 GMCL1P1Q8NEA9 526 aa14.81□□□□□ -0.04
CDH3-201ENST00000264012 SENP7Q9BQF6 1050 aa14.81□□□□□ -0.04
CDH3-201ENST00000264012 IL17RBQ9NRM6 502 aa14.81□□□□□ -0.04
CDH3-201ENST00000264012 ERAP1Q9NZ08 941 aa14.81□□□□□ -0.04
CDH3-201ENST00000264012 BFARQ9NZS9 450 aa14.81□□□□□ -0.04
CDH3-201ENST00000264012 POLIQ9UNA4 740 aa14.81□□□□□ -0.04
CDH3-201ENST00000264012 PIK3R2O00459 728 aa14.81□□□□□ -0.04
CDH3-201ENST00000264012 RGL2O15211 777 aa14.81□□□□□ -0.04
CDH3-201ENST00000264012 HBP1O60381 514 aa14.81□□□□□ -0.04
CDH3-201ENST00000264012 HSPA4LO95757 839 aa14.81□□□□□ -0.04
CDH3-201ENST00000264012 C6orf222P0C671 652 aaPredicted RBP14.81□□□□□ -0.04
CDH3-201ENST00000264012 ARP10275 920 aa14.81□□□□□ -0.04
CDH3-201ENST00000264012 NCAPHQ15003 741 aa14.81□□□□□ -0.04
CDH3-201ENST00000264012 STILQ15468 1287 aa14.81□□□□□ -0.04
CDH3-201ENST00000264012 GPRC5AQ8NFJ5 357 aa14.81□□□□□ -0.04
CDH3-201ENST00000264012 GTF3C2Q8WUA4 911 aaPredicted RBP14.81□□□□□ -0.04
CDH3-201ENST00000264012 RUBCNQ92622 972 aa14.81□□□□□ -0.04
CDH3-201ENST00000264012 GBP5Q96PP8 586 aa14.81□□□□□ -0.04
CDH3-201ENST00000264012 ZBED2Q9BTP6 218 aa14.81□□□□□ -0.04
CDH3-201ENST00000264012 VCX3AQ9NNX9 186 aa14.81□□□□□ -0.04
CDH3-201ENST00000264012 PDGFRAP16234 1089 aa14.81□□□□□ -0.04
CDH3-201ENST00000264012 ZFXP17010 805 aaPredicted RBP14.81□□□□□ -0.04
CDH3-201ENST00000264012 GJB7Q6PEY0 223 aa14.81□□□□□ -0.04
CDH3-201ENST00000264012 WDR75Q8IWA0 830 aaKnown RBP14.81□□□□□ -0.04
CDH3-201ENST00000264012 GBP7Q8N8V2 638 aaPredicted RBP14.81□□□□□ -0.04
CDH3-201ENST00000264012 TMEM117Q9H0C3 514 aa14.81□□□□□ -0.04
CDH3-201ENST00000264012 VPS11Q9H270 941 aa14.81□□□□□ -0.04
CDH3-201ENST00000264012 C17orf75Q9HAS0 396 aa14.81□□□□□ -0.04
CDH3-201ENST00000264012 TBX20Q9UMR3 447 aa14.81□□□□□ -0.04
CDH3-201ENST00000264012 CCL15-CCL14A0A0B4J2E2 113 aa14.8□□□□□ -0.04
CDH3-201ENST00000264012 RGS7P49802 495 aa14.8□□□□□ -0.04
CDH3-201ENST00000264012 CCL15Q16663 113 aa14.8□□□□□ -0.04
CDH3-201ENST00000264012 EFCAB12Q6NXP0 572 aa14.8□□□□□ -0.04
CDH3-201ENST00000264012 TTI2Q6NXR4 508 aa14.8□□□□□ -0.04
CDH3-201ENST00000264012 RCOR2Q8IZ40 523 aa14.8□□□□□ -0.04
CDH3-201ENST00000264012 AFG1LQ8WV93 481 aa14.8□□□□□ -0.04
CDH3-201ENST00000264012 OPHN1O60890 802 aa14.8□□□□□ -0.04
CDH3-201ENST00000264012 TTC4O95801 387 aa14.8□□□□□ -0.04
CDH3-201ENST00000264012 EIF3EP60228 445 aaKnown RBP14.8□□□□□ -0.04
CDH3-201ENST00000264012 TRIM51Q9BSJ1 452 aa14.8□□□□□ -0.04
CDH3-201ENST00000264012 PI4K2AQ9BTU6 479 aa14.8□□□□□ -0.04
CDH3-201ENST00000264012 FUCA2Q9BTY2 467 aa14.8□□□□□ -0.04
CDH3-201ENST00000264012 RBM12Q9NTZ6 932 aaKnown RBP14.8□□□□□ -0.04
CDH3-201ENST00000264012 PRMT7Q9NVM4 692 aaPredicted RBP14.8□□□□□ -0.04
CDH3-201ENST00000264012 SMARCAL1Q9NZC9 954 aa14.8□□□□□ -0.04
CDH3-201ENST00000264012 TMEM62Q0P6H9 643 aa14.8□□□□□ -0.04
CDH3-201ENST00000264012 SLC12A1Q13621 1099 aa14.8□□□□□ -0.04
CDH3-201ENST00000264012 ANKS1AQ92625 1134 aa14.8□□□□□ -0.04
CDH3-201ENST00000264012 GMNCA6NCL1 334 aa14.8□□□□□ -0.04
CDH3-201ENST00000264012 APOL1O14791 398 aa14.8□□□□□ -0.04
CDH3-201ENST00000264012 SHMT1P34896 483 aa14.8□□□□□ -0.04
CDH3-201ENST00000264012 CASP2P42575 452 aa14.8□□□□□ -0.04
CDH3-201ENST00000264012 PAPOLAP51003 745 aaKnown RBP14.8□□□□□ -0.04
CDH3-201ENST00000264012 BACE1P56817 501 aa14.8□□□□□ -0.04
CDH3-201ENST00000264012 E2F5Q15329 346 aa14.8□□□□□ -0.04
CDH3-201ENST00000264012 BEND6Q5SZJ8 279 aaPredicted RBP14.8□□□□□ -0.04
CDH3-201ENST00000264012 TRIM67Q6ZTA4 783 aa14.8□□□□□ -0.04
CDH3-201ENST00000264012 VGLL2Q8N8G2 317 aa14.8□□□□□ -0.04
CDH3-201ENST00000264012 EXT2Q93063 718 aa14.8□□□□□ -0.04
CDH3-201ENST00000264012 EPS15L1Q9UBC2 864 aa14.8□□□□□ -0.04
CDH3-201ENST00000264012 SLC8A2Q9UPR5 921 aa14.8□□□□□ -0.04
CDH3-201ENST00000264012 PHF2O75151 1096 aa14.79□□□□□ -0.04
CDH3-201ENST00000264012 DCTN3O75935 186 aa14.79□□□□□ -0.04
CDH3-201ENST00000264012 CTSHP09668 335 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms