RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 OATP04181 439 aa12.3□□□□□ -0.44
CLUHP3-201ENST00000254109 MYCNP04198 464 aaPredicted RBP12.3□□□□□ -0.44
CLUHP3-201ENST00000254109 RARBP10826 455 aa12.3□□□□□ -0.44
CLUHP3-201ENST00000254109 CTCFP49711 727 aaPredicted RBP12.3□□□□□ -0.44
CLUHP3-201ENST00000254109 MXI1P50539 228 aa12.3□□□□□ -0.44
CLUHP3-201ENST00000254109 SNRNP35Q16560 246 aaKnown RBP12.3□□□□□ -0.44
CLUHP3-201ENST00000254109 DGKDQ16760 1214 aa12.3□□□□□ -0.44
CLUHP3-201ENST00000254109 EPC2Q52LR7 807 aa12.3□□□□□ -0.44
CLUHP3-201ENST00000254109 PEX26Q7Z412 305 aa12.3□□□□□ -0.44
CLUHP3-201ENST00000254109 LRRC57Q8N9N7 239 aa12.3□□□□□ -0.44
CLUHP3-201ENST00000254109 SMARCAD1Q9H4L7 1026 aa12.3□□□□□ -0.44
CLUHP3-201ENST00000254109 ATP6V0A4Q9HBG4 840 aa12.3□□□□□ -0.44
CLUHP3-201ENST00000254109 XPNPEP3Q9NQH7 507 aa12.3□□□□□ -0.44
CLUHP3-201ENST00000254109 CYP26B1Q9NR63 512 aa12.3□□□□□ -0.44
CLUHP3-201ENST00000254109 SMARCAL1Q9NZC9 954 aa12.3□□□□□ -0.44
CLUHP3-201ENST00000254109 STIM2Q9P246 746 aa12.3□□□□□ -0.44
CLUHP3-201ENST00000254109 PACSIN2Q9UNF0 486 aaPredicted RBP12.3□□□□□ -0.44
CLUHP3-201ENST00000254109 BRCA2P51587 3418 aa12.29□□□□□ -0.44
CLUHP3-201ENST00000254109 ARID2Q68CP9 1835 aa12.29□□□□□ -0.44
CLUHP3-201ENST00000254109 GOLGA8IPA6NC78 632 aa12.29□□□□□ -0.44
CLUHP3-201ENST00000254109 GOLGA8JA6NMD2 632 aa12.29□□□□□ -0.44
CLUHP3-201ENST00000254109 LRRIQ3A6PVS8 624 aaPredicted RBP12.29□□□□□ -0.44
CLUHP3-201ENST00000254109 TMCO5BA8MYB1 307 aa12.29□□□□□ -0.44
CLUHP3-201ENST00000254109 ANKRD63C9JTQ0 380 aa12.29□□□□□ -0.44
CLUHP3-201ENST00000254109 FOXN3O00409 490 aaPredicted RBP12.29□□□□□ -0.44
CLUHP3-201ENST00000254109 LRRN2O75325 713 aa12.29□□□□□ -0.44
CLUHP3-201ENST00000254109 HOXD8P13378 290 aaPredicted RBP12.29□□□□□ -0.44
CLUHP3-201ENST00000254109 GJA9P57773 515 aa12.29□□□□□ -0.44
CLUHP3-201ENST00000254109 TNNC1P63316 161 aa12.29□□□□□ -0.44
CLUHP3-201ENST00000254109 PLCB4Q15147 1175 aa12.29□□□□□ -0.44
CLUHP3-201ENST00000254109 FSCN1Q16658 493 aaKnown RBP12.29□□□□□ -0.44
CLUHP3-201ENST00000254109 MTERF2Q49AM1 385 aa12.29□□□□□ -0.44
CLUHP3-201ENST00000254109 XKR3Q5GH77 459 aa12.29□□□□□ -0.44
CLUHP3-201ENST00000254109 PLPPR4Q7Z2D5 763 aa12.29□□□□□ -0.44
CLUHP3-201ENST00000254109 CTU1Q7Z7A3 348 aaKnown RBP12.29□□□□□ -0.44
CLUHP3-201ENST00000254109 IFT20Q8IY31 132 aa12.29□□□□□ -0.44
CLUHP3-201ENST00000254109 POMGNT1Q8WZA1 660 aa12.29□□□□□ -0.44
CLUHP3-201ENST00000254109 CALR3Q96L12 384 aaKnown RBP12.29□□□□□ -0.44
CLUHP3-201ENST00000254109 AGPAT1Q99943 283 aa12.29□□□□□ -0.44
CLUHP3-201ENST00000254109 UNC93B1Q9H1C4 597 aa12.29□□□□□ -0.44
CLUHP3-201ENST00000254109 HMX1Q9NP08 348 aaPredicted RBP12.29□□□□□ -0.44
CLUHP3-201ENST00000254109 MED4Q9NPJ6 270 aa12.29□□□□□ -0.44
CLUHP3-201ENST00000254109 DDX20Q9UHI6 824 aaKnown RBP12.29□□□□□ -0.44
CLUHP3-201ENST00000254109 USP20Q9Y2K6 914 aa12.29□□□□□ -0.44
CLUHP3-201ENST00000254109 NCANO14594 1321 aa12.28□□□□□ -0.44
CLUHP3-201ENST00000254109 H3BQF6 201 aa12.28□□□□□ -0.44
CLUHP3-201ENST00000254109 H3BRB1 525 aa12.28□□□□□ -0.44
CLUHP3-201ENST00000254109 MYL3P08590 195 aa12.28□□□□□ -0.44
CLUHP3-201ENST00000254109 CPT1AP50416 773 aa12.28□□□□□ -0.44
CLUHP3-201ENST00000254109 SLC7A5Q01650 507 aa12.28□□□□□ -0.44
CLUHP3-201ENST00000254109 MTFR1Q15390 333 aa12.28□□□□□ -0.44
CLUHP3-201ENST00000254109 GNASQ5JWF2 1037 aa12.28□□□□□ -0.44
CLUHP3-201ENST00000254109 C1orf220Q5T0J3 134 aa12.28□□□□□ -0.44
CLUHP3-201ENST00000254109 KRT39Q6A163 491 aa12.28□□□□□ -0.44
CLUHP3-201ENST00000254109 SLFN11Q7Z7L1 901 aa12.28□□□□□ -0.44
CLUHP3-201ENST00000254109 DAAM2Q86T65 1068 aa12.28□□□□□ -0.44
CLUHP3-201ENST00000254109 DNAAF5Q86Y56 855 aa12.28□□□□□ -0.44
CLUHP3-201ENST00000254109 CBWD2Q8IUF1 395 aa12.28□□□□□ -0.44
CLUHP3-201ENST00000254109 ARHGEF19Q8IW93 802 aa12.28□□□□□ -0.44
CLUHP3-201ENST00000254109 FAM71BQ8TC56 605 aa12.28□□□□□ -0.44
CLUHP3-201ENST00000254109 TMC2Q8TDI7 906 aa12.28□□□□□ -0.44
CLUHP3-201ENST00000254109 RFFLQ8WZ73 363 aa12.28□□□□□ -0.44
CLUHP3-201ENST00000254109 CCDC127Q96BQ5 260 aa12.28□□□□□ -0.44
CLUHP3-201ENST00000254109 SAAL1Q96ER3 474 aa12.28□□□□□ -0.44
CLUHP3-201ENST00000254109 BICD1Q96G01 975 aa12.28□□□□□ -0.44
CLUHP3-201ENST00000254109 SYT11Q9BT88 431 aa12.28□□□□□ -0.44
CLUHP3-201ENST00000254109 KIFC3Q9BVG8 833 aa12.28□□□□□ -0.44
CLUHP3-201ENST00000254109 TMEM117Q9H0C3 514 aa12.28□□□□□ -0.44
CLUHP3-201ENST00000254109 UPF3AQ9H1J1 476 aaKnown RBP12.28□□□□□ -0.44
CLUHP3-201ENST00000254109 TUT1Q9H6E5 874 aaKnown RBP12.28□□□□□ -0.44
CLUHP3-201ENST00000254109 SUCLA2Q9P2R7 463 aaPredicted RBP12.28□□□□□ -0.44
CLUHP3-201ENST00000254109 AMFRQ9UKV5 643 aa12.28□□□□□ -0.44
CLUHP3-201ENST00000254109 MYH10P35580 1976 aa12.28□□□□□ -0.44
CLUHP3-201ENST00000254109 ANKRD62A6NC57 917 aa12.27□□□□□ -0.44
CLUHP3-201ENST00000254109 CEP104O60308 925 aa12.27□□□□□ -0.44
CLUHP3-201ENST00000254109 ADAMTS4O75173 837 aa12.27□□□□□ -0.44
CLUHP3-201ENST00000254109 ADRB2P07550 413 aa12.27□□□□□ -0.44
CLUHP3-201ENST00000254109 SCP2P22307 547 aa12.27□□□□□ -0.44
CLUHP3-201ENST00000254109 TNFRSF8P28908 595 aa12.27□□□□□ -0.44
CLUHP3-201ENST00000254109 ADSSP30520 456 aa12.27□□□□□ -0.44
CLUHP3-201ENST00000254109 GTF2H1P32780 548 aa12.27□□□□□ -0.44
CLUHP3-201ENST00000254109 USP8P40818 1118 aa12.27□□□□□ -0.44
CLUHP3-201ENST00000254109 MFAP3P55082 362 aa12.27□□□□□ -0.44
CLUHP3-201ENST00000254109 MCCD1P59942 119 aaPredicted RBP12.27□□□□□ -0.44
CLUHP3-201ENST00000254109 BRDTQ58F21 947 aaPredicted RBP12.27□□□□□ -0.44
CLUHP3-201ENST00000254109 USP38Q8NB14 1042 aa12.27□□□□□ -0.44
CLUHP3-201ENST00000254109 SLC35G2Q8TBE7 412 aa12.27□□□□□ -0.44
CLUHP3-201ENST00000254109 ACTRT1Q8TDG2 376 aa12.27□□□□□ -0.44
CLUHP3-201ENST00000254109 AENQ8WTP8 325 aaKnown RBP12.27□□□□□ -0.44
CLUHP3-201ENST00000254109 HDAC7Q8WUI4 952 aa12.27□□□□□ -0.44
CLUHP3-201ENST00000254109 TRAPPC12Q8WVT3 735 aa12.27□□□□□ -0.44
CLUHP3-201ENST00000254109 BSNDQ8WZ55 320 aa12.27□□□□□ -0.44
CLUHP3-201ENST00000254109 KAT2BQ92831 832 aa12.27□□□□□ -0.44
CLUHP3-201ENST00000254109 ZBTB10Q96DT7 871 aa12.27□□□□□ -0.44
CLUHP3-201ENST00000254109 NIFKQ9BYG3 293 aaKnown RBP12.27□□□□□ -0.44
CLUHP3-201ENST00000254109 POLR3FQ9H1D9 316 aaPredicted RBP12.27□□□□□ -0.44
CLUHP3-201ENST00000254109 TMEM8AQ9HCN3 771 aa12.27□□□□□ -0.44
CLUHP3-201ENST00000254109 PDLIM7Q9NR12 457 aa12.27□□□□□ -0.44
CLUHP3-201ENST00000254109 NRBP2Q9NSY0 501 aa12.27□□□□□ -0.44
CLUHP3-201ENST00000254109 ERAP1Q9NZ08 941 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms