RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 CPSF3Q9UKF6 684 aaKnown RBP15.71■□□□□ 0.11
SUPT4H1-201ENST00000225504 MAPK8IP1Q9UQF2 711 aa15.71■□□□□ 0.11
SUPT4H1-201ENST00000225504 RWDD3Q9Y3V2 267 aa15.71■□□□□ 0.11
SUPT4H1-201ENST00000225504 GOLGA8IPA6NC78 632 aa15.71■□□□□ 0.1
SUPT4H1-201ENST00000225504 GOLGA8JA6NMD2 632 aa15.71■□□□□ 0.1
SUPT4H1-201ENST00000225504 FGF18O76093 207 aa15.71■□□□□ 0.1
SUPT4H1-201ENST00000225504 ALDH2P05091 517 aa15.71■□□□□ 0.1
SUPT4H1-201ENST00000225504 CLTAP09496 248 aa15.71■□□□□ 0.1
SUPT4H1-201ENST00000225504 YARSP54577 528 aaKnown RBP15.71■□□□□ 0.1
SUPT4H1-201ENST00000225504 KCNB1Q14721 858 aa15.71■□□□□ 0.1
SUPT4H1-201ENST00000225504 BMT2Q1RMZ1 405 aa15.71■□□□□ 0.1
SUPT4H1-201ENST00000225504 ISM2Q6H9L7 571 aa15.71■□□□□ 0.1
SUPT4H1-201ENST00000225504 SMYD4Q8IYR2 804 aaPredicted RBP15.71■□□□□ 0.1
SUPT4H1-201ENST00000225504 SLC39A11Q8N1S5 342 aa15.71■□□□□ 0.1
SUPT4H1-201ENST00000225504 SPATA20Q8TB22 786 aa15.71■□□□□ 0.1
SUPT4H1-201ENST00000225504 P2RX5Q93086 422 aa15.71■□□□□ 0.1
SUPT4H1-201ENST00000225504 SAAL1Q96ER3 474 aa15.71■□□□□ 0.1
SUPT4H1-201ENST00000225504 SNX27Q96L92 541 aa15.71■□□□□ 0.1
SUPT4H1-201ENST00000225504 FAM193BQ96PV7 902 aaPredicted RBP15.71■□□□□ 0.1
SUPT4H1-201ENST00000225504 RPS6KC1Q96S38 1066 aa15.71■□□□□ 0.1
SUPT4H1-201ENST00000225504 AAASQ9NRG9 546 aa15.71■□□□□ 0.1
SUPT4H1-201ENST00000225504 SPG21Q9NZD8 308 aa15.71■□□□□ 0.1
SUPT4H1-201ENST00000225504 TDRD15B5MCY1 1934 aaKnown RBP15.7■□□□□ 0.1
SUPT4H1-201ENST00000225504 PLXNA4Q9HCM2 1894 aa15.7■□□□□ 0.1
SUPT4H1-201ENST00000225504 TTC26A0AVF1 554 aa15.7■□□□□ 0.1
SUPT4H1-201ENST00000225504 LACTBL1A8MY62 500 aa15.7■□□□□ 0.1
SUPT4H1-201ENST00000225504 NRP1O14786 923 aa15.7■□□□□ 0.1
SUPT4H1-201ENST00000225504 CLIC2O15247 247 aa15.7■□□□□ 0.1
SUPT4H1-201ENST00000225504 CSPG5O95196 566 aa15.7■□□□□ 0.1
SUPT4H1-201ENST00000225504 THP07101 528 aa15.7■□□□□ 0.1
SUPT4H1-201ENST00000225504 ALDH7A1P49419 539 aaKnown RBP15.7■□□□□ 0.1
SUPT4H1-201ENST00000225504 SOX4Q06945 474 aaPredicted RBP15.7■□□□□ 0.1
SUPT4H1-201ENST00000225504 CAMK4Q16566 473 aa15.7■□□□□ 0.1
SUPT4H1-201ENST00000225504 KNOP1Q1ED39 458 aaKnown RBP15.7■□□□□ 0.1
SUPT4H1-201ENST00000225504 ELOA2Q8IYF1 753 aaPredicted RBP15.7■□□□□ 0.1
SUPT4H1-201ENST00000225504 RSPH1Q8WYR4 309 aa15.7■□□□□ 0.1
SUPT4H1-201ENST00000225504 C18orf25Q96B23 403 aaPredicted RBP15.7■□□□□ 0.1
SUPT4H1-201ENST00000225504 PPP1R10Q96QC0 940 aaKnown RBP15.7■□□□□ 0.1
SUPT4H1-201ENST00000225504 FAM213AQ9BRX8 229 aa15.7■□□□□ 0.1
SUPT4H1-201ENST00000225504 C11orf84Q9BUA3 381 aaPredicted RBP15.7■□□□□ 0.1
SUPT4H1-201ENST00000225504 FAN1Q9Y2M0 1017 aa15.7■□□□□ 0.1
SUPT4H1-201ENST00000225504 MTCH2Q9Y6C9 303 aa15.7■□□□□ 0.1
SUPT4H1-201ENST00000225504 COL4A4P53420 1690 aaPredicted RBP15.69■□□□□ 0.1
SUPT4H1-201ENST00000225504 KCNE1P15382 129 aa15.69■□□□□ 0.1
SUPT4H1-201ENST00000225504 FOSL2P15408 326 aa15.69■□□□□ 0.1
SUPT4H1-201ENST00000225504 GARTP22102 1010 aa15.69■□□□□ 0.1
SUPT4H1-201ENST00000225504 OR1G1P47890 313 aa15.69■□□□□ 0.1
SUPT4H1-201ENST00000225504 WNT7BP56706 349 aa15.69■□□□□ 0.1
SUPT4H1-201ENST00000225504 GRIK3Q13003 919 aa15.69■□□□□ 0.1
SUPT4H1-201ENST00000225504 SMARCE1Q969G3 411 aa15.69■□□□□ 0.1
SUPT4H1-201ENST00000225504 CCDC47Q96A33 483 aaKnown RBP15.69■□□□□ 0.1
SUPT4H1-201ENST00000225504 FAM212AQ96EL1 285 aa15.69■□□□□ 0.1
SUPT4H1-201ENST00000225504 CCDC34Q96HJ3 373 aa15.69■□□□□ 0.1
SUPT4H1-201ENST00000225504 IGSF21Q96ID5 467 aa15.69■□□□□ 0.1
SUPT4H1-201ENST00000225504 GSDMAQ96QA5 445 aa15.69■□□□□ 0.1
SUPT4H1-201ENST00000225504 GAS2L1Q99501 681 aaPredicted RBP15.69■□□□□ 0.1
SUPT4H1-201ENST00000225504 TMEM175Q9BSA9 504 aa15.69■□□□□ 0.1
SUPT4H1-201ENST00000225504 VN1R3Q9BXE9 311 aa15.69■□□□□ 0.1
SUPT4H1-201ENST00000225504 KCTD10Q9H3F6 313 aa15.69■□□□□ 0.1
SUPT4H1-201ENST00000225504 GOLGA2P5Q9HBQ8 144 aa15.69■□□□□ 0.1
SUPT4H1-201ENST00000225504 AGPAT3Q9NRZ7 376 aa15.69■□□□□ 0.1
SUPT4H1-201ENST00000225504 TOPORSQ9NS56 1045 aaPredicted RBP15.69■□□□□ 0.1
SUPT4H1-201ENST00000225504 CNTN3Q9P232 1028 aa15.69■□□□□ 0.1
SUPT4H1-201ENST00000225504 PRG3Q9Y2Y8 225 aaPredicted RBP15.69■□□□□ 0.1
SUPT4H1-201ENST00000225504 PCDHGC5Q9Y5F6 944 aa15.69■□□□□ 0.1
SUPT4H1-201ENST00000225504 CITO14578 2027 aa15.69■□□□□ 0.1
SUPT4H1-201ENST00000225504 MYO7AQ13402 2215 aa15.68■□□□□ 0.1
SUPT4H1-201ENST00000225504 CASTOR2A6NHX0 329 aa15.68■□□□□ 0.1
SUPT4H1-201ENST00000225504 SMC2O95347 1197 aa15.68■□□□□ 0.1
SUPT4H1-201ENST00000225504 ADRB2P07550 413 aa15.68■□□□□ 0.1
SUPT4H1-201ENST00000225504 POU3F3P20264 500 aaPredicted RBP15.68■□□□□ 0.1
SUPT4H1-201ENST00000225504 IRS1P35568 1242 aa15.68■□□□□ 0.1
SUPT4H1-201ENST00000225504 ERVFC1P60507 584 aa15.68■□□□□ 0.1
SUPT4H1-201ENST00000225504 PLCB3Q01970 1234 aa15.68■□□□□ 0.1
SUPT4H1-201ENST00000225504 TUSC3Q13454 348 aa15.68■□□□□ 0.1
SUPT4H1-201ENST00000225504 ARMCX5Q6P1M9 558 aa15.68■□□□□ 0.1
SUPT4H1-201ENST00000225504 GPT2Q8TD30 523 aa15.68■□□□□ 0.1
SUPT4H1-201ENST00000225504 NOC3LQ8WTT2 800 aaKnown RBP15.68■□□□□ 0.1
SUPT4H1-201ENST00000225504 POF1BQ8WVV4 589 aa15.68■□□□□ 0.1
SUPT4H1-201ENST00000225504 RPF1Q9H9Y2 349 aaKnown RBP15.68■□□□□ 0.1
SUPT4H1-201ENST00000225504 PLEKHA5Q9HAU0 1116 aa15.68■□□□□ 0.1
SUPT4H1-201ENST00000225504 MARCH5Q9NX47 278 aa15.68■□□□□ 0.1
SUPT4H1-201ENST00000225504 MAN1B1Q9UKM7 699 aa15.68■□□□□ 0.1
SUPT4H1-201ENST00000225504 PRRC2BQ5JSZ5 2229 aaKnown RBP15.68■□□□□ 0.1
SUPT4H1-201ENST00000225504 BMP6P22004 513 aa15.67■□□□□ 0.1
SUPT4H1-201ENST00000225504 CCDC85BQ15834 202 aaPredicted RBP15.67■□□□□ 0.1
SUPT4H1-201ENST00000225504 ZBTB6Q15916 424 aa15.67■□□□□ 0.1
SUPT4H1-201ENST00000225504 KYAT1Q16773 422 aa15.67■□□□□ 0.1
SUPT4H1-201ENST00000225504 TAS1R1Q7RTX1 841 aa15.67■□□□□ 0.1
SUPT4H1-201ENST00000225504 MRPL38Q96DV4 380 aaKnown RBP15.67■□□□□ 0.1
SUPT4H1-201ENST00000225504 FAM84AQ96KN4 292 aa15.67■□□□□ 0.1
SUPT4H1-201ENST00000225504 HSPBP1Q9NZL4 362 aa15.67■□□□□ 0.1
SUPT4H1-201ENST00000225504 HOOK1Q9UJC3 728 aaKnown RBP15.67■□□□□ 0.1
SUPT4H1-201ENST00000225504 UBE4BO95155 1302 aa15.67■□□□□ 0.1
SUPT4H1-201ENST00000225504 TULP1O00294 542 aaPredicted RBP15.66■□□□□ 0.1
SUPT4H1-201ENST00000225504 BIN1O00499 593 aa15.66■□□□□ 0.1
SUPT4H1-201ENST00000225504 EXTL3O43909 919 aa15.66■□□□□ 0.1
SUPT4H1-201ENST00000225504 PRCPP42785 496 aa15.66■□□□□ 0.1
SUPT4H1-201ENST00000225504 CYP2J2P51589 502 aa15.66■□□□□ 0.1
SUPT4H1-201ENST00000225504 GUCY2FP51841 1108 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms