RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 C21orf62-AS1Q17RA5 79 aa3.94□□□□□ -1.78
CDKN3-201ENST00000216414 AKNAD1Q5T1N1 836 aa3.94□□□□□ -1.78
CDKN3-201ENST00000216414 CNNM4Q6P4Q7 775 aa3.94□□□□□ -1.78
CDKN3-201ENST00000216414 FRMD7Q6ZUT3 714 aa3.94□□□□□ -1.78
CDKN3-201ENST00000216414 LYSMD2Q8IV50 215 aa3.94□□□□□ -1.78
CDKN3-201ENST00000216414 SMC1BQ8NDV3 1235 aa3.94□□□□□ -1.78
CDKN3-201ENST00000216414 REPS2Q8NFH8 660 aa3.94□□□□□ -1.78
CDKN3-201ENST00000216414 SH3TC2Q8TF17 1288 aa3.94□□□□□ -1.78
CDKN3-201ENST00000216414 FUBP3Q96I24 572 aaKnown RBP eCLIP3.94□□□□□ -1.78
CDKN3-201ENST00000216414 WNT8AQ9H1J5 351 aa3.94□□□□□ -1.78
CDKN3-201ENST00000216414 KANSL2Q9H9L4 492 aa3.94□□□□□ -1.78
CDKN3-201ENST00000216414 SPTLC3Q9NUV7 552 aa3.94□□□□□ -1.78
CDKN3-201ENST00000216414 ASB6Q9NWX5 421 aa3.94□□□□□ -1.78
CDKN3-201ENST00000216414 CDY2AQ9Y6F7 541 aa3.94□□□□□ -1.78
CDKN3-201ENST00000216414 A0A1B0GTW7 788 aa3.93□□□□□ -1.78
CDKN3-201ENST00000216414 LPLP06858 475 aa3.93□□□□□ -1.78
CDKN3-201ENST00000216414 SNRPA1P09661 255 aaKnown RBP3.93□□□□□ -1.78
CDKN3-201ENST00000216414 ZNF81P51508 661 aa3.93□□□□□ -1.78
CDKN3-201ENST00000216414 IL2P60568 153 aa3.93□□□□□ -1.78
CDKN3-201ENST00000216414 CXADRP78310 365 aa3.93□□□□□ -1.78
CDKN3-201ENST00000216414 OCRLQ01968 901 aa3.93□□□□□ -1.78
CDKN3-201ENST00000216414 NFE2L2Q16236 605 aa3.93□□□□□ -1.78
CDKN3-201ENST00000216414 SLC41A1Q8IVJ1 513 aa3.93□□□□□ -1.78
CDKN3-201ENST00000216414 FBXO18Q8NFZ0 1043 aa3.93□□□□□ -1.78
CDKN3-201ENST00000216414 DNAJC2Q99543 621 aaKnown RBP3.93□□□□□ -1.78
CDKN3-201ENST00000216414 HEPHQ9BQS7 1158 aa3.93□□□□□ -1.78
CDKN3-201ENST00000216414 AIFM2Q9BRQ8 373 aa3.93□□□□□ -1.78
CDKN3-201ENST00000216414 KCTD10Q9H3F6 313 aa3.93□□□□□ -1.78
CDKN3-201ENST00000216414 RNPEPQ9H4A4 650 aa3.93□□□□□ -1.78
CDKN3-201ENST00000216414 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.93□□□□□ -1.78
CDKN3-201ENST00000216414 GALNT9Q9HCQ5 603 aa3.93□□□□□ -1.78
CDKN3-201ENST00000216414 FOXJ2Q9P0K8 574 aa3.93□□□□□ -1.78
CDKN3-201ENST00000216414 SLC17A6Q9P2U8 582 aa3.93□□□□□ -1.78
CDKN3-201ENST00000216414 COL3A1P02461 1466 aaPredicted RBP3.92□□□□□ -1.78
CDKN3-201ENST00000216414 AATKQ6ZMQ8 1374 aa3.92□□□□□ -1.78
CDKN3-201ENST00000216414 PHF2O75151 1096 aa3.92□□□□□ -1.78
CDKN3-201ENST00000216414 ONECUT2O95948 504 aa3.92□□□□□ -1.78
CDKN3-201ENST00000216414 ADSLP30566 484 aaPredicted RBP3.92□□□□□ -1.78
CDKN3-201ENST00000216414 SCNN1BP51168 640 aa3.92□□□□□ -1.78
CDKN3-201ENST00000216414 HSD11B2P80365 405 aa3.92□□□□□ -1.78
CDKN3-201ENST00000216414 FAM47AQ5JRC9 791 aa3.92□□□□□ -1.78
CDKN3-201ENST00000216414 PITRM1Q5JRX3 1037 aa3.92□□□□□ -1.78
CDKN3-201ENST00000216414 C11orf74Q86VG3 221 aa3.92□□□□□ -1.78
CDKN3-201ENST00000216414 LRRTM3Q86VH5 581 aa3.92□□□□□ -1.78
CDKN3-201ENST00000216414 SH2D3CQ8N5H7 860 aa3.92□□□□□ -1.78
CDKN3-201ENST00000216414 PTCD3Q96EY7 689 aaKnown RBP3.92□□□□□ -1.78
CDKN3-201ENST00000216414 MRFAP1L1Q96HT8 127 aa3.92□□□□□ -1.78
CDKN3-201ENST00000216414 IL17RBQ9NRM6 502 aa3.92□□□□□ -1.78
CDKN3-201ENST00000216414 EDARQ9UNE0 448 aa3.92□□□□□ -1.78
CDKN3-201ENST00000216414 DMTF1Q9Y222 760 aa3.92□□□□□ -1.78
CDKN3-201ENST00000216414 MTO1Q9Y2Z2 717 aaKnown RBP3.92□□□□□ -1.78
CDKN3-201ENST00000216414 RPTORQ8N122 1335 aa3.92□□□□□ -1.78
CDKN3-201ENST00000216414 PROP1O75360 226 aa3.91□□□□□ -1.78
CDKN3-201ENST00000216414 GPANK1O95872 356 aa3.91□□□□□ -1.78
CDKN3-201ENST00000216414 RAP2AP10114 183 aa3.91□□□□□ -1.78
CDKN3-201ENST00000216414 POU3F2P20265 443 aaPredicted RBP3.91□□□□□ -1.78
CDKN3-201ENST00000216414 FGFR4P22455 802 aa3.91□□□□□ -1.78
CDKN3-201ENST00000216414 PCBP1Q15365 356 aaKnown RBP eCLIP3.91□□□□□ -1.78
CDKN3-201ENST00000216414 CT83Q5H943 113 aa3.91□□□□□ -1.78
CDKN3-201ENST00000216414 RRP12Q5JTH9 1297 aaKnown RBP3.91□□□□□ -1.78
CDKN3-201ENST00000216414 KRTAP5-11Q6L8G4 156 aa3.91□□□□□ -1.78
CDKN3-201ENST00000216414 FOXR2Q6PJQ5 311 aa3.91□□□□□ -1.78
CDKN3-201ENST00000216414 ZNF572Q7Z3I7 529 aaPredicted RBP3.91□□□□□ -1.78
CDKN3-201ENST00000216414 DRC7Q8IY82 874 aa3.91□□□□□ -1.78
CDKN3-201ENST00000216414 TRMT2AQ8IZ69 625 aaKnown RBP3.91□□□□□ -1.78
CDKN3-201ENST00000216414 FAM43AQ8N2R8 423 aa3.91□□□□□ -1.78
CDKN3-201ENST00000216414 ANKS1AQ92625 1134 aa3.91□□□□□ -1.78
CDKN3-201ENST00000216414 BOD1Q96IK1 185 aa3.91□□□□□ -1.78
CDKN3-201ENST00000216414 PDLIM2Q96JY6 352 aa3.91□□□□□ -1.78
CDKN3-201ENST00000216414 ZNF778Q96MU6 729 aa3.91□□□□□ -1.78
CDKN3-201ENST00000216414 UHRF1Q96T88 793 aaPredicted RBP3.91□□□□□ -1.78
CDKN3-201ENST00000216414 KMT5AQ9NQR1 393 aa3.91□□□□□ -1.78
CDKN3-201ENST00000216414 TMEM74BQ9NUR3 256 aa3.91□□□□□ -1.78
CDKN3-201ENST00000216414 TMEM260Q9NX78 707 aa3.91□□□□□ -1.78
CDKN3-201ENST00000216414 NOC2LQ9Y3T9 749 aaKnown RBP3.91□□□□□ -1.78
CDKN3-201ENST00000216414 CD2APQ9Y5K6 639 aa3.91□□□□□ -1.78
CDKN3-201ENST00000216414 PNPLA7Q6ZV29 1317 aa3.91□□□□□ -1.78
CDKN3-201ENST00000216414 FAM83GA6ND36 823 aa3.9□□□□□ -1.79
CDKN3-201ENST00000216414 AKR1B10O60218 316 aa3.9□□□□□ -1.79
CDKN3-201ENST00000216414 ERN1O75460 977 aaKnown RBP3.9□□□□□ -1.79
CDKN3-201ENST00000216414 LSSP48449 732 aa3.9□□□□□ -1.79
CDKN3-201ENST00000216414 MAPK7Q13164 816 aa3.9□□□□□ -1.79
CDKN3-201ENST00000216414 SF3A1Q15459 793 aaKnown RBP3.9□□□□□ -1.79
CDKN3-201ENST00000216414 SEPT7Q16181 437 aaKnown RBP3.9□□□□□ -1.79
CDKN3-201ENST00000216414 LCE1AQ5T7P2 110 aa3.9□□□□□ -1.79
CDKN3-201ENST00000216414 BROXQ5VW32 411 aa3.9□□□□□ -1.79
CDKN3-201ENST00000216414 ZNF788Q6ZQV5 615 aa3.9□□□□□ -1.79
CDKN3-201ENST00000216414 ZNF366Q8N895 744 aa3.9□□□□□ -1.79
CDKN3-201ENST00000216414 FUBP1Q96AE4 644 aaKnown RBP3.9□□□□□ -1.79
CDKN3-201ENST00000216414 NACC2Q96BF6 587 aa3.9□□□□□ -1.79
CDKN3-201ENST00000216414 PAWRQ96IZ0 340 aaKnown RBP3.9□□□□□ -1.79
CDKN3-201ENST00000216414 MRI1Q9BV20 369 aa3.9□□□□□ -1.79
CDKN3-201ENST00000216414 KCTD5Q9NXV2 234 aa3.9□□□□□ -1.79
CDKN3-201ENST00000216414 USP25Q9UHP3 1055 aa3.9□□□□□ -1.79
CDKN3-201ENST00000216414 KCNE5Q9UJ90 142 aa3.9□□□□□ -1.79
CDKN3-201ENST00000216414 CCDC78A2IDD5 438 aa3.89□□□□□ -1.79
CDKN3-201ENST00000216414 WDR91A4D1P6 747 aa3.89□□□□□ -1.79
CDKN3-201ENST00000216414 CGB1A6NKQ9 187 aa3.89□□□□□ -1.79
CDKN3-201ENST00000216414 FKBP9O95302 570 aa3.89□□□□□ -1.79
CDKN3-201ENST00000216414 POMCP01189 267 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms