RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 GARTP22102 1010 aa14.41□□□□□ -0.1
GTF3A-209ENST00000640289 PRCPP42785 496 aa14.41□□□□□ -0.1
GTF3A-209ENST00000640289 SCNN1GP51170 649 aa14.41□□□□□ -0.1
GTF3A-209ENST00000640289 MORC3Q14149 939 aa14.41□□□□□ -0.1
GTF3A-209ENST00000640289 NOMO2Q5JPE7 1267 aa14.41□□□□□ -0.1
GTF3A-209ENST00000640289 SLFN12LQ6IEE8 588 aa14.41□□□□□ -0.1
GTF3A-209ENST00000640289 ARMCX5Q6P1M9 558 aa14.41□□□□□ -0.1
GTF3A-209ENST00000640289 GLB1LQ6UWU2 654 aa14.41□□□□□ -0.1
GTF3A-209ENST00000640289 CMTR2Q8IYT2 770 aaKnown RBP14.41□□□□□ -0.1
GTF3A-209ENST00000640289 FIBCD1Q8N539 461 aa14.41□□□□□ -0.1
GTF3A-209ENST00000640289 GSTCDQ8NEC7 633 aa14.41□□□□□ -0.1
GTF3A-209ENST00000640289 TIFAQ96CG3 184 aa14.41□□□□□ -0.1
GTF3A-209ENST00000640289 CCDC94Q9BW85 323 aaPredicted RBP14.41□□□□□ -0.1
GTF3A-209ENST00000640289 KCTD10Q9H3F6 313 aa14.41□□□□□ -0.1
GTF3A-209ENST00000640289 UBN1Q9NPG3 1134 aa14.41□□□□□ -0.1
GTF3A-209ENST00000640289 AGPAT3Q9NRZ7 376 aa14.41□□□□□ -0.1
GTF3A-209ENST00000640289 TYW1Q9NV66 732 aaKnown RBP14.41□□□□□ -0.1
GTF3A-209ENST00000640289 AGO2Q9UKV8 859 aaKnown RBP14.41□□□□□ -0.1
GTF3A-209ENST00000640289 MRPL42Q9Y6G3 142 aaKnown RBP14.41□□□□□ -0.1
GTF3A-209ENST00000640289 GOLGA8IPA6NC78 632 aa14.4□□□□□ -0.1
GTF3A-209ENST00000640289 GOLGA8JA6NMD2 632 aa14.4□□□□□ -0.1
GTF3A-209ENST00000640289 KIF20AO95235 890 aa14.4□□□□□ -0.1
GTF3A-209ENST00000640289 LINC00271P0C7V0 271 aa14.4□□□□□ -0.1
GTF3A-209ENST00000640289 CXCL8P10145 99 aa14.4□□□□□ -0.1
GTF3A-209ENST00000640289 CD44P16070 742 aaKnown RBP14.4□□□□□ -0.1
GTF3A-209ENST00000640289 ACOT2P49753 483 aa14.4□□□□□ -0.1
GTF3A-209ENST00000640289 YARSP54577 528 aaKnown RBP14.4□□□□□ -0.1
GTF3A-209ENST00000640289 TAP1Q03518 808 aa14.4□□□□□ -0.1
GTF3A-209ENST00000640289 PPP2R2DQ66LE6 453 aa14.4□□□□□ -0.1
GTF3A-209ENST00000640289 CRELD2Q6UXH1 353 aaPredicted RBP14.4□□□□□ -0.1
GTF3A-209ENST00000640289 GUF1Q8N442 669 aaKnown RBP14.4□□□□□ -0.1
GTF3A-209ENST00000640289 NOC3LQ8WTT2 800 aaKnown RBP14.4□□□□□ -0.1
GTF3A-209ENST00000640289 ACAP3Q96P50 834 aa14.4□□□□□ -0.1
GTF3A-209ENST00000640289 CWH43Q9H720 699 aa14.4□□□□□ -0.1
GTF3A-209ENST00000640289 CERS4Q9HA82 394 aa14.4□□□□□ -0.1
GTF3A-209ENST00000640289 TBC1D13Q9NVG8 400 aa14.4□□□□□ -0.1
GTF3A-209ENST00000640289 TMEM63CQ9P1W3 806 aa14.4□□□□□ -0.1
GTF3A-209ENST00000640289 CPSF3Q9UKF6 684 aaKnown RBP14.4□□□□□ -0.1
GTF3A-209ENST00000640289 PLAGL2Q9UPG8 496 aa14.4□□□□□ -0.1
GTF3A-209ENST00000640289 RANBP2P49792 3224 aaKnown RBP14.39□□□□□ -0.11
GTF3A-209ENST00000640289 PTGESO14684 152 aa14.39□□□□□ -0.11
GTF3A-209ENST00000640289 INPPL1O15357 1258 aa14.39□□□□□ -0.11
GTF3A-209ENST00000640289 B4GALT3O60512 393 aa14.39□□□□□ -0.11
GTF3A-209ENST00000640289 CLTAP09496 248 aa14.39□□□□□ -0.11
GTF3A-209ENST00000640289 CYP2J2P51589 502 aa14.39□□□□□ -0.11
GTF3A-209ENST00000640289 SLC10A6Q3KNW5 377 aa14.39□□□□□ -0.11
GTF3A-209ENST00000640289 COBLL1Q53SF7 1204 aa14.39□□□□□ -0.11
GTF3A-209ENST00000640289 GLRA4Q5JXX5 417 aa14.39□□□□□ -0.11
GTF3A-209ENST00000640289 HS2ST1Q7LGA3 356 aa14.39□□□□□ -0.11
GTF3A-209ENST00000640289 ZNF280BQ86YH2 543 aa14.39□□□□□ -0.11
GTF3A-209ENST00000640289 ADSSL1Q8N142 457 aa14.39□□□□□ -0.11
GTF3A-209ENST00000640289 LRRC43Q8N309 656 aa14.39□□□□□ -0.11
GTF3A-209ENST00000640289 URGCPQ8TCY9 931 aa14.39□□□□□ -0.11
GTF3A-209ENST00000640289 SNX27Q96L92 541 aa14.39□□□□□ -0.11
GTF3A-209ENST00000640289 RPS6KC1Q96S38 1066 aa14.39□□□□□ -0.11
GTF3A-209ENST00000640289 FAM213AQ9BRX8 229 aa14.39□□□□□ -0.11
GTF3A-209ENST00000640289 C17orf80Q9BSJ5 609 aa14.39□□□□□ -0.11
GTF3A-209ENST00000640289 SEMA6BQ9H3T3 888 aa14.39□□□□□ -0.11
GTF3A-209ENST00000640289 SLC28A3Q9HAS3 691 aa14.39□□□□□ -0.11
GTF3A-209ENST00000640289 HSPBP1Q9NZL4 362 aa14.39□□□□□ -0.11
GTF3A-209ENST00000640289 MTUS1Q9ULD2 1270 aa14.39□□□□□ -0.11
GTF3A-209ENST00000640289 PPP1R3GB7ZBB8 358 aa14.38□□□□□ -0.11
GTF3A-209ENST00000640289 PDXKO00764 312 aa14.38□□□□□ -0.11
GTF3A-209ENST00000640289 DDHD2O94830 711 aa14.38□□□□□ -0.11
GTF3A-209ENST00000640289 PBX3P40426 434 aa14.38□□□□□ -0.11
GTF3A-209ENST00000640289 SPAG1Q07617 926 aa14.38□□□□□ -0.11
GTF3A-209ENST00000640289 ENOX2Q16206 610 aaKnown RBP14.38□□□□□ -0.11
GTF3A-209ENST00000640289 SPOUT1Q5T280 376 aaKnown RBP14.38□□□□□ -0.11
GTF3A-209ENST00000640289 CCDC183Q5T5S1 534 aa14.38□□□□□ -0.11
GTF3A-209ENST00000640289 CAVIN1Q6NZI2 390 aaKnown RBP14.38□□□□□ -0.11
GTF3A-209ENST00000640289 ALKAL1Q6UXT8 129 aa14.38□□□□□ -0.11
GTF3A-209ENST00000640289 GPD1LQ8N335 351 aa14.38□□□□□ -0.11
GTF3A-209ENST00000640289 TRIML1Q8N9V2 468 aa14.38□□□□□ -0.11
GTF3A-209ENST00000640289 ZMAT2Q96NC0 199 aaKnown RBP14.38□□□□□ -0.11
GTF3A-209ENST00000640289 MRPL9Q9BYD2 267 aaKnown RBP14.38□□□□□ -0.11
GTF3A-209ENST00000640289 TTYH1Q9H313 450 aaPredicted RBP14.38□□□□□ -0.11
GTF3A-209ENST00000640289 NRDE2Q9H7Z3 1164 aa14.38□□□□□ -0.11
GTF3A-209ENST00000640289 RPF1Q9H9Y2 349 aaKnown RBP14.38□□□□□ -0.11
GTF3A-209ENST00000640289 TOPORSQ9NS56 1045 aaPredicted RBP14.38□□□□□ -0.11
GTF3A-209ENST00000640289 DNAJB4Q9UDY4 337 aa14.38□□□□□ -0.11
GTF3A-209ENST00000640289 TRAF3IP3Q9Y228 551 aa14.38□□□□□ -0.11
GTF3A-209ENST00000640289 SMIM28A0A1B0GU29 152 aa14.37□□□□□ -0.11
GTF3A-209ENST00000640289 TTC26A0AVF1 554 aa14.37□□□□□ -0.11
GTF3A-209ENST00000640289 TRIM49BA6NDI0 452 aa14.37□□□□□ -0.11
GTF3A-209ENST00000640289 LACTBL1A8MY62 500 aa14.37□□□□□ -0.11
GTF3A-209ENST00000640289 CALUO43852 315 aaPredicted RBP14.37□□□□□ -0.11
GTF3A-209ENST00000640289 EXTL3O43909 919 aa14.37□□□□□ -0.11
GTF3A-209ENST00000640289 ZC3H11AO75152 810 aaKnown RBP eCLIP14.37□□□□□ -0.11
GTF3A-209ENST00000640289 LDHAP00338 332 aaKnown RBP14.37□□□□□ -0.11
GTF3A-209ENST00000640289 FXR1P51114 621 aaKnown RBP eCLIP14.37□□□□□ -0.11
GTF3A-209ENST00000640289 PMS1P54277 932 aaKnown RBP14.37□□□□□ -0.11
GTF3A-209ENST00000640289 WNT7BP56706 349 aa14.37□□□□□ -0.11
GTF3A-209ENST00000640289 SNRPFP62306 86 aaKnown RBP14.37□□□□□ -0.11
GTF3A-209ENST00000640289 RNASELQ05823 741 aaKnown RBP14.37□□□□□ -0.11
GTF3A-209ENST00000640289 GRIK3Q13003 919 aa14.37□□□□□ -0.11
GTF3A-209ENST00000640289 KYAT1Q16773 422 aa14.37□□□□□ -0.11
GTF3A-209ENST00000640289 KLHL40Q2TBA0 621 aa14.37□□□□□ -0.11
GTF3A-209ENST00000640289 ZCWPW2Q504Y3 356 aa14.37□□□□□ -0.11
GTF3A-209ENST00000640289 XKR4Q5GH76 650 aa14.37□□□□□ -0.11
GTF3A-209ENST00000640289 KLHL10Q6JEL2 608 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms