RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 USP19O94966 1318 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 ERBB4Q15303 1308 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 A0A087WUV0 522 aaPredicted RBP5.85□□□□□ -1.47
SCN1A-209ENST00000635750 C21orf2O43822 256 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 CAND2O75155 1236 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 FDX1P10109 184 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 ALOX15P16050 662 aaPredicted RBP5.85□□□□□ -1.47
SCN1A-209ENST00000635750 CASP14P31944 242 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 ADD1P35611 737 aaKnown RBP5.85□□□□□ -1.47
SCN1A-209ENST00000635750 STAT3P40763 770 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 NDUFA8P51970 172 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 NPEPPSP55786 919 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 YWHAZP63104 245 aaKnown RBP5.85□□□□□ -1.47
SCN1A-209ENST00000635750 CCDC92Q53HC0 331 aaPredicted RBP5.85□□□□□ -1.47
SCN1A-209ENST00000635750 TRIM65Q6PJ69 517 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 FAM47EQ6ZV65 393 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 ATPAF2Q8N5M1 289 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 GTF3C2Q8WUA4 911 aaPredicted RBP5.85□□□□□ -1.47
SCN1A-209ENST00000635750 MED15Q96RN5 788 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 DHX35Q9H5Z1 703 aaKnown RBP5.85□□□□□ -1.47
SCN1A-209ENST00000635750 CAPN10Q9HC96 672 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 ZFP69BQ9UJL9 534 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 A0A1W2PP64 1363 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 C16orf96A6NNT2 1141 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 GADD45BO75293 160 aaPredicted RBP5.85□□□□□ -1.47
SCN1A-209ENST00000635750 BMP10O95393 424 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 CXCR5P32302 372 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 ZNF157P51786 506 aaPredicted RBP5.85□□□□□ -1.47
SCN1A-209ENST00000635750 KCNQ4P56696 695 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 GPC5P78333 572 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 ALDH6A1Q02252 535 aaKnown RBP5.85□□□□□ -1.47
SCN1A-209ENST00000635750 C2orf54Q08AI8 447 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 ME3Q16798 604 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 IYDQ6PHW0 289 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 MTHFD1LQ6UB35 978 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 ANKRD13CQ8N6S4 541 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 ZNF496Q96IT1 587 aaPredicted RBP5.85□□□□□ -1.47
SCN1A-209ENST00000635750 SENP2Q9HC62 589 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 PIN4Q9Y237 131 aaKnown RBP5.85□□□□□ -1.47
SCN1A-209ENST00000635750 SESN1Q9Y6P5 492 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 WDR62O43379 1518 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 ABCC10Q5T3U5 1492 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 ABCB11O95342 1321 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 DEAF1O75398 565 aaPredicted RBP5.85□□□□□ -1.47
SCN1A-209ENST00000635750 CACNB1Q02641 598 aaPredicted RBP5.85□□□□□ -1.47
SCN1A-209ENST00000635750 TGM3Q08188 693 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 C8orf34Q49A92 452 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 ENOSF1Q7L5Y1 443 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 MOSPD2Q8NHP6 518 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 RNASE11Q8TAA1 199 aaKnown RBP5.85□□□□□ -1.47
SCN1A-209ENST00000635750 DPF3Q92784 378 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 OTUD5Q96G74 571 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 CLIC6Q96NY7 704 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 NUP85Q9BW27 656 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 GPR63Q9BZJ6 419 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 SLC13A1Q9BZW2 595 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 MFSD1Q9H3U5 465 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 ARMC7Q9H6L4 198 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 GREM2Q9H772 168 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 CATSPERBQ9H7T0 1116 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 CD274Q9NZQ7 290 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 CNOT7Q9UIV1 285 aaKnown RBP5.85□□□□□ -1.47
SCN1A-209ENST00000635750 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.85□□□□□ -1.47
SCN1A-209ENST00000635750 MYO1GB0I1T2 1018 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 PEX1O43933 1283 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 CLASP2O75122 1294 aaKnown RBP5.85□□□□□ -1.47
SCN1A-209ENST00000635750 BRINP3Q76B58 766 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.85□□□□□ -1.47
SCN1A-209ENST00000635750 DGKHQ86XP1 1220 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 CAMKK1Q8N5S9 505 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 FAM162AQ96A26 154 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 SEPT5Q99719 369 aaPredicted RBP5.85□□□□□ -1.47
SCN1A-209ENST00000635750 SH3GLB2Q9NR46 395 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 PARVAQ9NVD7 372 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 SLC9A2Q9UBY0 812 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 DPP7Q9UHL4 492 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 FBXL21Q9UKT6 434 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 BLOC1S6Q9UL45 172 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 SSH2Q76I76 1423 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 CCDC195A0A1B0GUA6 201 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 C3orf70A6NLC5 250 aaPredicted RBP5.85□□□□□ -1.47
SCN1A-209ENST00000635750 ZBTB7BO15156 539 aaPredicted RBP5.85□□□□□ -1.47
SCN1A-209ENST00000635750 TYK2P29597 1187 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 ALDH7A1P49419 539 aaKnown RBP5.85□□□□□ -1.47
SCN1A-209ENST00000635750 SULT1E1P49888 294 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 RAB14P61106 215 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 KIF23Q02241 960 aaPredicted RBP5.85□□□□□ -1.47
SCN1A-209ENST00000635750 KCNH2Q12809 1159 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 EZH2Q15910 746 aaKnown RBP5.85□□□□□ -1.47
SCN1A-209ENST00000635750 KIZQ2M2Z5 673 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 ALFQ53S48 1182 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 FAM102AQ5T9C2 384 aaPredicted RBP5.85□□□□□ -1.47
SCN1A-209ENST00000635750 MICALL2Q8IY33 904 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 SHCBP1Q8NEM2 672 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 AHCYL2Q96HN2 611 aaKnown RBP5.85□□□□□ -1.47
SCN1A-209ENST00000635750 FAM213AQ9BRX8 229 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 EPN3Q9H201 632 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 CNOT8Q9UFF9 292 aaKnown RBP5.85□□□□□ -1.47
SCN1A-209ENST00000635750 GTF2A1LQ9UNN4 478 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 AURKCQ9UQB9 309 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms