RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 ESPNB1AK53 854 aa19.37■□□□□ 0.69
PTCHD3-202ENST00000622555 PITPNM1O00562 1244 aa19.37■□□□□ 0.69
PTCHD3-202ENST00000622555 TNFSF9P41273 254 aa19.37■□□□□ 0.69
PTCHD3-202ENST00000622555 OSTNP61366 133 aa19.37■□□□□ 0.69
PTCHD3-202ENST00000622555 UBXN1Q04323 297 aa19.37■□□□□ 0.69
PTCHD3-202ENST00000622555 NR1I3Q14994 352 aa19.37■□□□□ 0.69
PTCHD3-202ENST00000622555 CEP120Q8N960 986 aa19.37■□□□□ 0.69
PTCHD3-202ENST00000622555 SLC35C1Q96A29 364 aa19.37■□□□□ 0.69
PTCHD3-202ENST00000622555 CCDC127Q96BQ5 260 aa19.37■□□□□ 0.69
PTCHD3-202ENST00000622555 CCDC51Q96ER9 411 aa19.37■□□□□ 0.69
PTCHD3-202ENST00000622555 HIPK3Q9H422 1215 aa19.37■□□□□ 0.69
PTCHD3-202ENST00000622555 RBAKQ9NYW8 714 aaPredicted RBP19.37■□□□□ 0.69
PTCHD3-202ENST00000622555 ANK1P16157 1881 aa19.37■□□□□ 0.69
PTCHD3-202ENST00000622555 TEX33O43247 280 aa19.37■□□□□ 0.69
PTCHD3-202ENST00000622555 TRIM49P0CI25 452 aa19.37■□□□□ 0.69
PTCHD3-202ENST00000622555 TRIM49CP0CI26 452 aa19.37■□□□□ 0.69
PTCHD3-202ENST00000622555 KCNH2Q12809 1159 aa19.37■□□□□ 0.69
PTCHD3-202ENST00000622555 MBTPS1Q14703 1052 aa19.37■□□□□ 0.69
PTCHD3-202ENST00000622555 TWF2Q6IBS0 349 aaKnown RBP19.37■□□□□ 0.69
PTCHD3-202ENST00000622555 EIF2AQ9BY44 585 aaKnown RBP19.37■□□□□ 0.69
PTCHD3-202ENST00000622555 TRIM6Q9C030 488 aaPredicted RBP19.37■□□□□ 0.69
PTCHD3-202ENST00000622555 CPSF3Q9UKF6 684 aaKnown RBP19.37■□□□□ 0.69
PTCHD3-202ENST00000622555 STAG3L1P0CL83 205 aa19.36■□□□□ 0.69
PTCHD3-202ENST00000622555 KYAT1Q16773 422 aa19.36■□□□□ 0.69
PTCHD3-202ENST00000622555 PTPN21Q16825 1174 aa19.36■□□□□ 0.69
PTCHD3-202ENST00000622555 FKBP15Q5T1M5 1219 aa19.36■□□□□ 0.69
PTCHD3-202ENST00000622555 USP37Q86T82 979 aa19.36■□□□□ 0.69
PTCHD3-202ENST00000622555 PLEKHO2Q8TD55 490 aa19.36■□□□□ 0.69
PTCHD3-202ENST00000622555 TMC2Q8TDI7 906 aa19.36■□□□□ 0.69
PTCHD3-202ENST00000622555 CHST12Q9NRB3 414 aa19.36■□□□□ 0.69
PTCHD3-202ENST00000622555 UMODL1Q5DID0 1318 aa19.35■□□□□ 0.69
PTCHD3-202ENST00000622555 AFPP02771 609 aaKnown RBP19.35■□□□□ 0.69
PTCHD3-202ENST00000622555 CLTAP09496 248 aa19.35■□□□□ 0.69
PTCHD3-202ENST00000622555 CLTBP09497 229 aa19.35■□□□□ 0.69
PTCHD3-202ENST00000622555 DLG4P78352 724 aa19.35■□□□□ 0.69
PTCHD3-202ENST00000622555 SCN5AQ14524 2016 aa19.35■□□□□ 0.69
PTCHD3-202ENST00000622555 PSMD6Q15008 389 aa19.35■□□□□ 0.69
PTCHD3-202ENST00000622555 BRSK2Q8IWQ3 736 aa19.35■□□□□ 0.69
PTCHD3-202ENST00000622555 TMEM192Q8IY95 271 aa19.35■□□□□ 0.69
PTCHD3-202ENST00000622555 PARD3BQ8TEW8 1205 aa19.35■□□□□ 0.69
PTCHD3-202ENST00000622555 PPP1R12CQ9BZL4 782 aa19.35■□□□□ 0.69
PTCHD3-202ENST00000622555 MMRN2Q9H8L6 949 aa19.35■□□□□ 0.69
PTCHD3-202ENST00000622555 TMEM39AQ9NV64 488 aa19.35■□□□□ 0.69
PTCHD3-202ENST00000622555 TRIP11Q15643 1979 aa19.34■□□□□ 0.69
PTCHD3-202ENST00000622555 DLATP10515 647 aaKnown RBP19.34■□□□□ 0.69
PTCHD3-202ENST00000622555 ZSCAN20P17040 1043 aaPredicted RBP19.34■□□□□ 0.69
PTCHD3-202ENST00000622555 UBXN11Q5T124 520 aa19.34■□□□□ 0.69
PTCHD3-202ENST00000622555 DRC7Q8IY82 874 aa19.34■□□□□ 0.69
PTCHD3-202ENST00000622555 FAM212AQ96EL1 285 aa19.34■□□□□ 0.69
PTCHD3-202ENST00000622555 FNBP1Q96RU3 617 aa19.34■□□□□ 0.69
PTCHD3-202ENST00000622555 CCDC94Q9BW85 323 aaPredicted RBP19.34■□□□□ 0.69
PTCHD3-202ENST00000622555 RPF1Q9H9Y2 349 aaKnown RBP19.34■□□□□ 0.69
PTCHD3-202ENST00000622555 PDE11AQ9HCR9 933 aa19.34■□□□□ 0.69
PTCHD3-202ENST00000622555 TBX21Q9UL17 535 aa19.34■□□□□ 0.69
PTCHD3-202ENST00000622555 LRRIQ3A6PVS8 624 aaPredicted RBP19.34■□□□□ 0.69
PTCHD3-202ENST00000622555 CXCL8P10145 99 aa19.34■□□□□ 0.69
PTCHD3-202ENST00000622555 CDC25BP30305 580 aa19.34■□□□□ 0.69
PTCHD3-202ENST00000622555 GRM5P41594 1212 aa19.34■□□□□ 0.69
PTCHD3-202ENST00000622555 ENOX2Q16206 610 aaKnown RBP19.34■□□□□ 0.69
PTCHD3-202ENST00000622555 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.34■□□□□ 0.69
PTCHD3-202ENST00000622555 UBE2Q1Q7Z7E8 422 aa19.34■□□□□ 0.69
PTCHD3-202ENST00000622555 POP1Q99575 1024 aaKnown RBP19.34■□□□□ 0.69
PTCHD3-202ENST00000622555 IFIH1Q9BYX4 1025 aaKnown RBP19.34■□□□□ 0.69
PTCHD3-202ENST00000622555 TMX1Q9H3N1 280 aa19.34■□□□□ 0.69
PTCHD3-202ENST00000622555 STX10O60499 249 aa19.33■□□□□ 0.68
PTCHD3-202ENST00000622555 NBNO60934 754 aa19.33■□□□□ 0.68
PTCHD3-202ENST00000622555 CYP2C18P33260 490 aa19.33■□□□□ 0.68
PTCHD3-202ENST00000622555 CLCN1P35523 988 aa19.33■□□□□ 0.68
PTCHD3-202ENST00000622555 WNT7BP56706 349 aa19.33■□□□□ 0.68
PTCHD3-202ENST00000622555 ENPEPQ07075 957 aa19.33■□□□□ 0.68
PTCHD3-202ENST00000622555 C1orf220Q5T0J3 134 aa19.33■□□□□ 0.68
PTCHD3-202ENST00000622555 VSTM4Q8IW00 320 aa19.33■□□□□ 0.68
PTCHD3-202ENST00000622555 ACAP3Q96P50 834 aa19.33■□□□□ 0.68
PTCHD3-202ENST00000622555 NXF3Q9H4D5 531 aaKnown RBP19.33■□□□□ 0.68
PTCHD3-202ENST00000622555 TOPORSQ9NS56 1045 aaPredicted RBP19.33■□□□□ 0.68
PTCHD3-202ENST00000622555 HES2Q9Y543 173 aa19.33■□□□□ 0.68
PTCHD3-202ENST00000622555 RALGAPA2Q2PPJ7 1873 aa19.33■□□□□ 0.68
PTCHD3-202ENST00000622555 FMO5P49326 533 aa19.32■□□□□ 0.68
PTCHD3-202ENST00000622555 CCL23P55773 120 aa19.32■□□□□ 0.68
PTCHD3-202ENST00000622555 MCCD1P59942 119 aaPredicted RBP19.32■□□□□ 0.68
PTCHD3-202ENST00000622555 ZSCAN30Q86W11 494 aa19.32■□□□□ 0.68
PTCHD3-202ENST00000622555 SCLYQ96I15 445 aa19.32■□□□□ 0.68
PTCHD3-202ENST00000622555 APOL6Q9BWW8 343 aa19.32■□□□□ 0.68
PTCHD3-202ENST00000622555 WNT8AQ9H1J5 351 aa19.32■□□□□ 0.68
PTCHD3-202ENST00000622555 SNTG2Q9NY99 539 aa19.32■□□□□ 0.68
PTCHD3-202ENST00000622555 IPPQ9Y573 584 aa19.32■□□□□ 0.68
PTCHD3-202ENST00000622555 MGEA5O60502 916 aa19.31■□□□□ 0.68
PTCHD3-202ENST00000622555 IL18RAPO95256 599 aa19.31■□□□□ 0.68
PTCHD3-202ENST00000622555 TNNI1P19237 187 aa19.31■□□□□ 0.68
PTCHD3-202ENST00000622555 PBX1P40424 430 aa19.31■□□□□ 0.68
PTCHD3-202ENST00000622555 GCLMP48507 274 aa19.31■□□□□ 0.68
PTCHD3-202ENST00000622555 POU5F1Q01860 360 aaKnown RBP19.31■□□□□ 0.68
PTCHD3-202ENST00000622555 PPP3CAQ08209 521 aa19.31■□□□□ 0.68
PTCHD3-202ENST00000622555 DSC3Q14574 896 aa19.31■□□□□ 0.68
PTCHD3-202ENST00000622555 SYCP1Q15431 976 aa19.31■□□□□ 0.68
PTCHD3-202ENST00000622555 SURF1Q15526 300 aa19.31■□□□□ 0.68
PTCHD3-202ENST00000622555 TMC6Q7Z403 805 aa19.31■□□□□ 0.68
PTCHD3-202ENST00000622555 SPC24Q8NBT2 197 aa19.31■□□□□ 0.68
PTCHD3-202ENST00000622555 TET1Q8NFU7 2136 aa19.31■□□□□ 0.68
PTCHD3-202ENST00000622555 CGRRF1Q99675 332 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms