RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 APOA5Q6Q788 366 aa6.14□□□□□ -1.43
CPNE3-213ENST00000622183 GADL1Q6ZQY3 521 aa6.14□□□□□ -1.43
CPNE3-213ENST00000622183 TOGARAM2Q6ZUX3 1019 aa6.14□□□□□ -1.43
CPNE3-213ENST00000622183 TRMT2AQ8IZ69 625 aaKnown RBP6.14□□□□□ -1.43
CPNE3-213ENST00000622183 ZGPATQ8N5A5 531 aaKnown RBP6.14□□□□□ -1.43
CPNE3-213ENST00000622183 PARD3BQ8TEW8 1205 aa6.14□□□□□ -1.43
CPNE3-213ENST00000622183 CASKIN2Q8WXE0 1202 aa6.14□□□□□ -1.43
CPNE3-213ENST00000622183 SLC35A4Q96G79 324 aa6.14□□□□□ -1.43
CPNE3-213ENST00000622183 VRK1Q99986 396 aaPredicted RBP6.14□□□□□ -1.43
CPNE3-213ENST00000622183 SLC6A15Q9H2J7 730 aa6.14□□□□□ -1.43
CPNE3-213ENST00000622183 JADE2Q9NQC1 790 aa6.14□□□□□ -1.43
CPNE3-213ENST00000622183 PCDHA3Q9Y5H8 950 aa6.14□□□□□ -1.43
CPNE3-213ENST00000622183 MYBBP1AQ9BQG0 1328 aaKnown RBP6.14□□□□□ -1.43
CPNE3-213ENST00000622183 CFAP69A5D8W1 941 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 H3BUI4 141 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 RFXAPO00287 272 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 NRP1O14786 923 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 FFAR3O14843 346 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 KRT1P04264 644 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 MYL3P08590 195 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 FTH1P19P0C7X4 201 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 TYRP14679 529 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 DDCP20711 480 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 MALP21145 153 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 ADCY7P51828 1080 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 RRADP55042 308 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 BPIFB4P59827 614 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 DUSP2Q05923 314 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 MTM1Q13496 603 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 PLS1Q14651 629 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 LONRF1Q17RB8 773 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 MCTP2Q6DN12 878 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 ATG14Q6ZNE5 492 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 USP30Q70CQ3 517 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 GPR155Q7Z3F1 870 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 COL23A1Q86Y22 540 aaPredicted RBP6.13□□□□□ -1.43
CPNE3-213ENST00000622183 FAM186BQ8IYM0 893 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 ZDHHC14Q8IZN3 488 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 CARFQ8N187 725 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 TXNDC5Q8NBS9 432 aaKnown RBP6.13□□□□□ -1.43
CPNE3-213ENST00000622183 DACT3Q96B18 629 aaPredicted RBP6.13□□□□□ -1.43
CPNE3-213ENST00000622183 MBD6Q96DN6 1003 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 FAM84AQ96KN4 292 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 TNIP3Q96KP6 325 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 MYD88Q99836 296 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 ARPC5LQ9BPX5 153 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 C22orf23Q9BZE7 217 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 SENP6Q9GZR1 1112 aaPredicted RBP6.13□□□□□ -1.43
CPNE3-213ENST00000622183 LDAHQ9H6V9 325 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 ARMT1Q9H993 441 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 ATP6V0A4Q9HBG4 840 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 NLRC4Q9NPP4 1024 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 TMEM140Q9NV12 185 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 RTEL1Q9NZ71 1219 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 ABCF2Q9UG63 623 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 AJAP1Q9UKB5 411 aaPredicted RBP6.13□□□□□ -1.43
CPNE3-213ENST00000622183 KCTD3Q9Y597 815 aa6.13□□□□□ -1.43
CPNE3-213ENST00000622183 TCAF2A6NFQ2 919 aa6.12□□□□□ -1.43
CPNE3-213ENST00000622183 IFRD1O00458 451 aaPredicted RBP6.12□□□□□ -1.43
CPNE3-213ENST00000622183 PHGDHO43175 533 aaKnown RBP6.12□□□□□ -1.43
CPNE3-213ENST00000622183 PCSK1P29120 753 aa6.12□□□□□ -1.43
CPNE3-213ENST00000622183 SERPINB3P29508 390 aa6.12□□□□□ -1.43
CPNE3-213ENST00000622183 ATP2C1P98194 919 aaPredicted RBP6.12□□□□□ -1.43
CPNE3-213ENST00000622183 IFIT5Q13325 482 aaKnown RBP6.12□□□□□ -1.43
CPNE3-213ENST00000622183 SNAPC2Q13487 334 aa6.12□□□□□ -1.43
CPNE3-213ENST00000622183 NFYCQ13952 458 aa6.12□□□□□ -1.43
CPNE3-213ENST00000622183 SAFB2Q14151 953 aaKnown RBP eCLIP6.12□□□□□ -1.43
CPNE3-213ENST00000622183 C10orf62Q5T681 223 aaPredicted RBP6.12□□□□□ -1.43
CPNE3-213ENST00000622183 ZNF572Q7Z3I7 529 aaPredicted RBP6.12□□□□□ -1.43
CPNE3-213ENST00000622183 SRLQ86TD4 932 aa6.12□□□□□ -1.43
CPNE3-213ENST00000622183 REPS2Q8NFH8 660 aa6.12□□□□□ -1.43
CPNE3-213ENST00000622183 ADAMTS17Q8TE56 1095 aa6.12□□□□□ -1.43
CPNE3-213ENST00000622183 APIPQ96GX9 242 aa6.12□□□□□ -1.43
CPNE3-213ENST00000622183 NT5C1BQ96P26 610 aa6.12□□□□□ -1.43
CPNE3-213ENST00000622183 PPP1R16BQ96T49 567 aa6.12□□□□□ -1.43
CPNE3-213ENST00000622183 APOL5Q9BWW9 433 aa6.12□□□□□ -1.43
CPNE3-213ENST00000622183 BTBD1Q9H0C5 482 aa6.12□□□□□ -1.43
CPNE3-213ENST00000622183 WDCPQ9H6R7 721 aa6.12□□□□□ -1.43
CPNE3-213ENST00000622183 ZMAT3Q9HA38 289 aaKnown RBP6.12□□□□□ -1.43
CPNE3-213ENST00000622183 CD320Q9NPF0 282 aa6.12□□□□□ -1.43
CPNE3-213ENST00000622183 PNPOQ9NVS9 261 aa6.12□□□□□ -1.43
CPNE3-213ENST00000622183 PUF60Q9UHX1 559 aaKnown RBP6.12□□□□□ -1.43
CPNE3-213ENST00000622183 FEZ2Q9UHY8 353 aaPredicted RBP6.12□□□□□ -1.43
CPNE3-213ENST00000622183 TPCN1Q9ULQ1 816 aa6.12□□□□□ -1.43
CPNE3-213ENST00000622183 SMG5Q9UPR3 1016 aaKnown RBP6.12□□□□□ -1.43
CPNE3-213ENST00000622183 DAAM1Q9Y4D1 1078 aa6.12□□□□□ -1.43
CPNE3-213ENST00000622183 ATRNL1Q5VV63 1379 aa6.11□□□□□ -1.43
CPNE3-213ENST00000622183 NT5C1B-RDH14C9J2C7 533 aa6.11□□□□□ -1.43
CPNE3-213ENST00000622183 ARHGAP6O43182 974 aa6.11□□□□□ -1.43
CPNE3-213ENST00000622183 MYF5P13349 255 aa6.11□□□□□ -1.43
CPNE3-213ENST00000622183 IL2RBP14784 551 aa6.11□□□□□ -1.43
CPNE3-213ENST00000622183 SMARCA1P28370 1054 aa6.11□□□□□ -1.43
CPNE3-213ENST00000622183 CTXN1P60606 82 aa6.11□□□□□ -1.43
CPNE3-213ENST00000622183 ADAM8P78325 824 aa6.11□□□□□ -1.43
CPNE3-213ENST00000622183 SP140Q13342 867 aa6.11□□□□□ -1.43
CPNE3-213ENST00000622183 TBR1Q16650 682 aa6.11□□□□□ -1.43
CPNE3-213ENST00000622183 ZNF385BQ569K4 471 aa6.11□□□□□ -1.43
CPNE3-213ENST00000622183 PRAMEF14Q5SWL7 426 aa6.11□□□□□ -1.43
CPNE3-213ENST00000622183 KRT40Q6A162 431 aa6.11□□□□□ -1.43
CPNE3-213ENST00000622183 PDZD4Q76G19 769 aaPredicted RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms