RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 EXTL3O43909 919 aa9.68□□□□□ -0.86
CCDC47-207ENST00000612558 MSCO60682 206 aa9.68□□□□□ -0.86
CCDC47-207ENST00000612558 AOC2O75106 756 aa9.68□□□□□ -0.86
CCDC47-207ENST00000612558 LDHAP00338 332 aaKnown RBP9.68□□□□□ -0.86
CCDC47-207ENST00000612558 ADRB2P07550 413 aa9.68□□□□□ -0.86
CCDC47-207ENST00000612558 TNNT1P13805 278 aa9.68□□□□□ -0.86
CCDC47-207ENST00000612558 UCHL3P15374 230 aa9.68□□□□□ -0.86
CCDC47-207ENST00000612558 CPT1AP50416 773 aa9.68□□□□□ -0.86
CCDC47-207ENST00000612558 CLCN3P51790 818 aa9.68□□□□□ -0.86
CCDC47-207ENST00000612558 DLG4P78352 724 aa9.68□□□□□ -0.86
CCDC47-207ENST00000612558 MYL7Q01449 175 aa9.68□□□□□ -0.86
CCDC47-207ENST00000612558 PPFIA1Q13136 1202 aa9.68□□□□□ -0.86
CCDC47-207ENST00000612558 MAPK6Q16659 721 aa9.68□□□□□ -0.86
CCDC47-207ENST00000612558 CBWD6Q4V339 395 aa9.68□□□□□ -0.86
CCDC47-207ENST00000612558 CBWD3Q5JTY5 395 aa9.68□□□□□ -0.86
CCDC47-207ENST00000612558 CBWD5Q5RIA9 395 aa9.68□□□□□ -0.86
CCDC47-207ENST00000612558 MFSD14CQ5VZR4 134 aa9.68□□□□□ -0.86
CCDC47-207ENST00000612558 TRIM65Q6PJ69 517 aa9.68□□□□□ -0.86
CCDC47-207ENST00000612558 MTHFD1LQ6UB35 978 aa9.68□□□□□ -0.86
CCDC47-207ENST00000612558 ZPBP2Q6X784 338 aa9.68□□□□□ -0.86
CCDC47-207ENST00000612558 REXO1L1PQ8IX06 675 aa9.68□□□□□ -0.86
CCDC47-207ENST00000612558 LINC01465Q8N7H1 131 aa9.68□□□□□ -0.86
CCDC47-207ENST00000612558 ZSWIM2Q8NEG5 633 aa9.68□□□□□ -0.86
CCDC47-207ENST00000612558 PARD3BQ8TEW8 1205 aa9.68□□□□□ -0.86
CCDC47-207ENST00000612558 MRPL4Q9BYD3 311 aaKnown RBP9.68□□□□□ -0.86
CCDC47-207ENST00000612558 NFKBIZQ9BYH8 718 aa9.68□□□□□ -0.86
CCDC47-207ENST00000612558 CCDC113Q9H0I3 377 aa9.68□□□□□ -0.86
CCDC47-207ENST00000612558 NLRC4Q9NPP4 1024 aa9.68□□□□□ -0.86
CCDC47-207ENST00000612558 AGO2Q9UKV8 859 aaKnown RBP9.68□□□□□ -0.86
CCDC47-207ENST00000612558 MYO6Q9UM54 1294 aa9.68□□□□□ -0.86
CCDC47-207ENST00000612558 DAAM1Q9Y4D1 1078 aa9.68□□□□□ -0.86
CCDC47-207ENST00000612558 SIP14410 1827 aa9.68□□□□□ -0.86
CCDC47-207ENST00000612558 A0A0B4J269 797 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 TTC24A2A3L6 582 aaPredicted RBP9.67□□□□□ -0.86
CCDC47-207ENST00000612558 NDUFA10O95299 355 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 F2P00734 622 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 ACTN1P12814 892 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 AKR1A1P14550 325 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 GTF2H1P32780 548 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 CYLC1P35663 651 aaPredicted RBP9.67□□□□□ -0.86
CCDC47-207ENST00000612558 FLT3LGP49771 235 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 PTENP60484 403 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 SP3Q02447 781 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 CYP24A1Q07973 514 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 PPP3CAQ08209 521 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 KIF22Q14807 665 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 GRIK4Q16099 956 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 C1orf220Q5T0J3 134 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 SFMBT2Q5VUG0 894 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 EHBP1Q8NDI1 1231 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 PLEKHO2Q8TD55 490 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 CCDC42Q96M95 316 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 NLRP4Q96MN2 994 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 FAM213AQ9BRX8 229 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 DESI2Q9BSY9 194 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 TARS2Q9BW92 718 aaKnown RBP9.67□□□□□ -0.86
CCDC47-207ENST00000612558 CFHR5Q9BXR6 569 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 ARHGAP39Q9C0H5 1083 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 NHEJ1Q9H9Q4 299 aaPredicted RBP9.67□□□□□ -0.86
CCDC47-207ENST00000612558 SIX2Q9NPC8 291 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 AIPL1Q9NZN9 384 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 GABRQQ9UN88 632 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 NRCAMQ92823 1304 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 EIF3CLB5ME19 914 aaKnown RBP9.67□□□□□ -0.86
CCDC47-207ENST00000612558 ACKR2O00590 384 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 CLDN3O15551 220 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 DUSP11O75319 330 aaKnown RBP9.67□□□□□ -0.86
CCDC47-207ENST00000612558 TOM1L1O75674 476 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 WFS1O76024 890 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 TBC1D8O95759 1140 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 PRKCBP05771 671 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 MATR3P43243 847 aaKnown RBP eCLIP9.67□□□□□ -0.86
CCDC47-207ENST00000612558 PHKA2P46019 1235 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 GCLMP48507 274 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 SMCPP49901 116 aaPredicted RBP9.67□□□□□ -0.86
CCDC47-207ENST00000612558 MXI1P50539 228 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 KRT83P78385 493 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 APBA1Q02410 837 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 KIAA0753Q2KHM9 967 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 SLC9C1Q4G0N8 1177 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 MARCH8Q5T0T0 291 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 KRT39Q6A163 491 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 KAT2BQ92831 832 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 CCDC127Q96BQ5 260 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 ZBTB10Q96DT7 871 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 SPAG5Q96R06 1193 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 EIF3CQ99613 913 aaKnown RBP9.67□□□□□ -0.86
CCDC47-207ENST00000612558 ACO2Q99798 780 aaKnown RBP9.67□□□□□ -0.86
CCDC47-207ENST00000612558 MSTO1Q9BUK6 570 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 TMEM117Q9H0C3 514 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 INTS2Q9H0H0 1204 aaKnown RBP9.67□□□□□ -0.86
CCDC47-207ENST00000612558 FZD8Q9H461 694 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 TMEM8AQ9HCN3 771 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 ANKFY1Q9P2R3 1169 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 AKT3Q9Y243 479 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 USP20Q9Y2K6 914 aa9.67□□□□□ -0.86
CCDC47-207ENST00000612558 SSU72P8A0A1W2PR75 194 aa9.66□□□□□ -0.86
CCDC47-207ENST00000612558 LRRIQ3A6PVS8 624 aaPredicted RBP9.66□□□□□ -0.86
CCDC47-207ENST00000612558 INO80B-WBP1J3KQ70 363 aa9.66□□□□□ -0.86
CCDC47-207ENST00000612558 KPNA6O60684 536 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms