RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 ZBTB33Q86T24 672 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 RBM46Q8TBY0 533 aaKnown RBP6.81□□□□□ -1.32
SNX13-213ENST00000611725 KLHL14Q9P2G3 628 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 ALS2Q96Q42 1657 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 TRPM3Q9HCF6 1732 aaPredicted RBP6.81□□□□□ -1.32
SNX13-213ENST00000611725 GGPS1O95749 300 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 MMEP08473 750 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 CYP11B1P15538 503 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 ANGEL2Q5VTE6 544 aaKnown RBP6.81□□□□□ -1.32
SNX13-213ENST00000611725 KAZNQ674X7 775 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 LRRC31Q6UY01 552 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 CCDC91Q7Z6B0 441 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 PASD1Q8IV76 773 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 MAP4K3Q8IVH8 894 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 TAB3Q8N5C8 712 aaPredicted RBP6.81□□□□□ -1.32
SNX13-213ENST00000611725 EPS8L1Q8TE68 723 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 P3H4Q92791 437 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 UBIAD1Q9Y5Z9 338 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 USP54Q70EL1 1684 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 HLA-DRAP01903 254 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 TBXAS1P24557 533 aaPredicted RBP6.81□□□□□ -1.32
SNX13-213ENST00000611725 ZKSCAN8Q15776 578 aaPredicted RBP6.81□□□□□ -1.32
SNX13-213ENST00000611725 ZNF667Q5HYK9 610 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 HHATQ5VTY9 493 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 GADL1Q6ZQY3 521 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 EIF1ADQ8N9N8 165 aaKnown RBP6.81□□□□□ -1.32
SNX13-213ENST00000611725 ZKSCAN4Q969J2 545 aaPredicted RBP6.81□□□□□ -1.32
SNX13-213ENST00000611725 FERMT1Q9BQL6 677 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 ATP9AO75110 1047 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 PHF2O75151 1096 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 P4HA1P13674 534 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 ACTR2P61160 394 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 PHLDB3Q6NSJ2 640 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 EPM2AIP1Q7L775 607 aaPredicted RBP6.81□□□□□ -1.32
SNX13-213ENST00000611725 LNX1Q8TBB1 728 aaPredicted RBP6.81□□□□□ -1.32
SNX13-213ENST00000611725 SEPT1Q8WYJ6 367 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 SHC3Q92529 594 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 ARHGEF26Q96DR7 871 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 RBM41Q96IZ5 413 aaKnown RBP6.81□□□□□ -1.32
SNX13-213ENST00000611725 ADPGKQ9BRR6 497 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 PCDHA2Q9Y5H9 948 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 YDJCA8MPS7 323 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 CES2O00748 559 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 STAM2O75886 525 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 MAPTP10636 758 aaKnown RBP6.81□□□□□ -1.32
SNX13-213ENST00000611725 EFNA5P52803 228 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 IGBP1P78318 339 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 GCNT1Q02742 428 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 MMS22LQ6ZRQ5 1243 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 ERICH1Q86X53 443 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 GIMAP7Q8NHV1 300 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 ATP8B4Q8TF62 1192 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 ALG3Q92685 438 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 ACP6Q9NPH0 428 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 MEFVO15553 781 aaPredicted RBP6.81□□□□□ -1.32
SNX13-213ENST00000611725 SYF2O95926 243 aaKnown RBP6.81□□□□□ -1.32
SNX13-213ENST00000611725 GARTP22102 1010 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 RRM1P23921 792 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 GNA15P30679 374 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 PGM5Q15124 567 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 SURF1Q15526 300 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 UAP1Q16222 522 aaPredicted RBP6.81□□□□□ -1.32
SNX13-213ENST00000611725 NBPF12Q5TAG4 269 aaPredicted RBP6.81□□□□□ -1.32
SNX13-213ENST00000611725 KDM7AQ6ZMT4 941 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 TRIM72Q6ZMU5 477 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 PI4K2AQ9BTU6 479 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 MIS12Q9H081 205 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 GDF3Q9NR23 364 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 HESX1Q9UBX0 185 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 BTNL10A8MVZ5 291 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 VWA5AO00534 786 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 SGPL1O95470 568 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 FAM107AO95990 144 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 NOP14P78316 857 aaKnown RBP6.8□□□□□ -1.32
SNX13-213ENST00000611725 JAG1P78504 1218 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 GTF2BQ00403 316 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 ZBTB16Q05516 673 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 C11orf63Q6NUN7 778 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 PALB2Q86YC2 1186 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 MAP7D3Q8IWC1 876 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 MREGQ8N565 214 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 DHX38Q92620 1227 aaKnown RBP6.8□□□□□ -1.32
SNX13-213ENST00000611725 DCPSQ96C86 337 aaKnown RBP6.8□□□□□ -1.32
SNX13-213ENST00000611725 CHMP6Q96FZ7 201 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 NLRP4Q96MN2 994 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 AGO4Q9HCK5 861 aaKnown RBP6.8□□□□□ -1.32
SNX13-213ENST00000611725 GGA3Q9NZ52 723 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 ATRNL1Q5VV63 1379 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 MYBL1P10243 752 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 EZRP15311 586 aaKnown RBP6.8□□□□□ -1.32
SNX13-213ENST00000611725 SLC1A1P43005 524 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 FNTAP49354 379 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 PTENP60484 403 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 KYNUQ16719 465 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 WDR72Q3MJ13 1102 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 SCARA5Q6ZMJ2 495 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 CTAGE3PQ8IX95 158 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 RBBP8NLQ8NC74 664 aaPredicted RBP6.8□□□□□ -1.32
SNX13-213ENST00000611725 ATL2Q8NHH9 583 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 AKT1S1Q96B36 256 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms