RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 CCDC149Q6ZUS6 474 aa17.67■□□□□ 0.42
SGMS1-209ENST00000609445 PALB2Q86YC2 1186 aa17.67■□□□□ 0.42
SGMS1-209ENST00000609445 HASPINQ8TF76 798 aa17.67■□□□□ 0.42
SGMS1-209ENST00000609445 DDX19AQ9NUU7 478 aaKnown RBP17.67■□□□□ 0.42
SGMS1-209ENST00000609445 USTQ9Y2C2 406 aa17.67■□□□□ 0.42
SGMS1-209ENST00000609445 DOCK6Q96HP0 2047 aa17.67■□□□□ 0.42
SGMS1-209ENST00000609445 ZMYM2Q9UBW7 1377 aa17.66■□□□□ 0.42
SGMS1-209ENST00000609445 CCDC195A0A1B0GUA6 201 aa17.66■□□□□ 0.42
SGMS1-209ENST00000609445 CASTOR2A6NHX0 329 aa17.66■□□□□ 0.42
SGMS1-209ENST00000609445 PP2D1A8MPX8 630 aa17.66■□□□□ 0.42
SGMS1-209ENST00000609445 ACKR2O00590 384 aa17.66■□□□□ 0.42
SGMS1-209ENST00000609445 TADA2AO75478 443 aa17.66■□□□□ 0.42
SGMS1-209ENST00000609445 RFPL2O75678 378 aa17.66■□□□□ 0.42
SGMS1-209ENST00000609445 RECQL4O94761 1208 aa17.66■□□□□ 0.42
SGMS1-209ENST00000609445 RPL17P18621 184 aaKnown RBP17.66■□□□□ 0.42
SGMS1-209ENST00000609445 MUTP22033 750 aa17.66■□□□□ 0.42
SGMS1-209ENST00000609445 AVPR2P30518 371 aa17.66■□□□□ 0.42
SGMS1-209ENST00000609445 MRE11P49959 708 aa17.66■□□□□ 0.42
SGMS1-209ENST00000609445 USP41Q3LFD5 358 aa17.66■□□□□ 0.42
SGMS1-209ENST00000609445 UBALD2Q8IYN6 164 aa17.66■□□□□ 0.42
SGMS1-209ENST00000609445 PLCD3Q8N3E9 789 aa17.66■□□□□ 0.42
SGMS1-209ENST00000609445 SNX29Q8TEQ0 813 aa17.66■□□□□ 0.42
SGMS1-209ENST00000609445 RIN2Q8WYP3 895 aaPredicted RBP17.66■□□□□ 0.42
SGMS1-209ENST00000609445 PHOX2BQ99453 314 aa17.66■□□□□ 0.42
SGMS1-209ENST00000609445 DOCK8Q8NF50 2099 aa17.66■□□□□ 0.42
SGMS1-209ENST00000609445 VWA8A3KMH1 1905 aa17.66■□□□□ 0.42
SGMS1-209ENST00000609445 CDC25AP30304 524 aa17.65■□□□□ 0.42
SGMS1-209ENST00000609445 TCF15Q12870 199 aa17.65■□□□□ 0.42
SGMS1-209ENST00000609445 TUSC3Q13454 348 aa17.65■□□□□ 0.42
SGMS1-209ENST00000609445 HSP90AA2PQ14568 343 aaPredicted RBP17.65■□□□□ 0.42
SGMS1-209ENST00000609445 PPP2R5AQ15172 486 aa17.65■□□□□ 0.42
SGMS1-209ENST00000609445 IL17AQ16552 155 aa17.65■□□□□ 0.42
SGMS1-209ENST00000609445 NT5DC1Q5TFE4 455 aa17.65■□□□□ 0.42
SGMS1-209ENST00000609445 PRSS55Q6UWB4 352 aaPredicted RBP17.65■□□□□ 0.42
SGMS1-209ENST00000609445 C15orf39Q6ZRI6 1047 aa17.65■□□□□ 0.42
SGMS1-209ENST00000609445 IGSF22Q8N9C0 903 aa17.65■□□□□ 0.42
SGMS1-209ENST00000609445 CMASQ8NFW8 434 aaPredicted RBP17.65■□□□□ 0.42
SGMS1-209ENST00000609445 ACSF2Q96CM8 615 aaPredicted RBP17.65■□□□□ 0.42
SGMS1-209ENST00000609445 IFT74Q96LB3 600 aa17.65■□□□□ 0.42
SGMS1-209ENST00000609445 GDAQ9Y2T3 454 aa17.65■□□□□ 0.42
SGMS1-209ENST00000609445 E9PMD0 336 aa17.64■□□□□ 0.41
SGMS1-209ENST00000609445 N4BP1O75113 896 aaKnown RBP17.64■□□□□ 0.41
SGMS1-209ENST00000609445 KIF4AO95239 1232 aa17.64■□□□□ 0.41
SGMS1-209ENST00000609445 CENPBP07199 599 aaPredicted RBP17.64■□□□□ 0.41
SGMS1-209ENST00000609445 PDIA5Q14554 519 aa17.64■□□□□ 0.41
SGMS1-209ENST00000609445 NAB2Q15742 525 aa17.64■□□□□ 0.41
SGMS1-209ENST00000609445 RTP2Q5QGT7 225 aa17.64■□□□□ 0.41
SGMS1-209ENST00000609445 OTOP3Q7RTS5 596 aa17.64■□□□□ 0.41
SGMS1-209ENST00000609445 KIFAP3Q92845 792 aa17.64■□□□□ 0.41
SGMS1-209ENST00000609445 ADPGKQ9BRR6 497 aa17.64■□□□□ 0.41
SGMS1-209ENST00000609445 TGM5O43548 720 aa17.63■□□□□ 0.41
SGMS1-209ENST00000609445 THP07101 528 aa17.63■□□□□ 0.41
SGMS1-209ENST00000609445 PTPN5P54829 565 aa17.63■□□□□ 0.41
SGMS1-209ENST00000609445 MCTP1Q6DN14 999 aa17.63■□□□□ 0.41
SGMS1-209ENST00000609445 KCNK18Q7Z418 384 aa17.63■□□□□ 0.41
SGMS1-209ENST00000609445 DAW1Q8N136 415 aa17.63■□□□□ 0.41
SGMS1-209ENST00000609445 SMG7Q92540 1137 aaKnown RBP17.63■□□□□ 0.41
SGMS1-209ENST00000609445 ZNF707Q96C28 371 aaPredicted RBP17.63■□□□□ 0.41
SGMS1-209ENST00000609445 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.63■□□□□ 0.41
SGMS1-209ENST00000609445 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.63■□□□□ 0.41
SGMS1-209ENST00000609445 FNIP2Q9P278 1114 aa17.63■□□□□ 0.41
SGMS1-209ENST00000609445 SF3B1O75533 1304 aaKnown RBP eCLIP17.63■□□□□ 0.414e-6■■■■■ 94.6
SGMS1-209ENST00000609445 MYH11P35749 1972 aa17.62■□□□□ 0.41
SGMS1-209ENST00000609445 IGFBP6P24592 240 aaPredicted RBP17.62■□□□□ 0.41
SGMS1-209ENST00000609445 PEX3P56589 373 aa17.62■□□□□ 0.41
SGMS1-209ENST00000609445 RABEP1Q15276 862 aa17.62■□□□□ 0.41
SGMS1-209ENST00000609445 DCAF4L1Q3SXM0 396 aa17.62■□□□□ 0.41
SGMS1-209ENST00000609445 GLRA4Q5JXX5 417 aa17.62■□□□□ 0.41
SGMS1-209ENST00000609445 ATF7IP2Q5U623 682 aa17.62■□□□□ 0.41
SGMS1-209ENST00000609445 FAM171A1Q5VUB5 890 aa17.62■□□□□ 0.41
SGMS1-209ENST00000609445 LILRA6Q6PI73 481 aa17.62■□□□□ 0.41
SGMS1-209ENST00000609445 CEP57Q86XR8 500 aa17.62■□□□□ 0.41
SGMS1-209ENST00000609445 MMTAG2Q9BU76 263 aaKnown RBP17.62■□□□□ 0.41
SGMS1-209ENST00000609445 RUSC1Q9BVN2 902 aa17.62■□□□□ 0.41
SGMS1-209ENST00000609445 RAB34Q9BZG1 259 aa17.62■□□□□ 0.41
SGMS1-209ENST00000609445 NT5C3AQ9H0P0 336 aa17.62■□□□□ 0.41
SGMS1-209ENST00000609445 WDR6Q9NNW5 1121 aaKnown RBP17.62■□□□□ 0.41
SGMS1-209ENST00000609445 FAM86C1Q9NVL1 165 aa17.62■□□□□ 0.41
SGMS1-209ENST00000609445 CLUHO75153 1309 aa17.62■□□□□ 0.41
SGMS1-209ENST00000609445 CCDC169A6NNP5 214 aa17.61■□□□□ 0.41
SGMS1-209ENST00000609445 K7ERI5 159 aa17.61■□□□□ 0.41
SGMS1-209ENST00000609445 HIP1RO75146 1068 aa17.61■□□□□ 0.41
SGMS1-209ENST00000609445 CD2BP2O95400 341 aaKnown RBP17.61■□□□□ 0.41
SGMS1-209ENST00000609445 GBP2P32456 591 aaPredicted RBP17.61■□□□□ 0.41
SGMS1-209ENST00000609445 EFNA5P52803 228 aa17.61■□□□□ 0.41
SGMS1-209ENST00000609445 KRT79Q5XKE5 535 aa17.61■□□□□ 0.41
SGMS1-209ENST00000609445 ELMSAN1Q6PJG2 1045 aa17.61■□□□□ 0.41
SGMS1-209ENST00000609445 GPR65Q8IYL9 337 aa17.61■□□□□ 0.41
SGMS1-209ENST00000609445 CEP120Q8N960 986 aa17.61■□□□□ 0.41
SGMS1-209ENST00000609445 HDAC7Q8WUI4 952 aa17.61■□□□□ 0.41
SGMS1-209ENST00000609445 RSAD2Q8WXG1 361 aa17.61■□□□□ 0.41
SGMS1-209ENST00000609445 MYADMQ96S97 322 aa17.61■□□□□ 0.41
SGMS1-209ENST00000609445 PRRX2Q99811 253 aa17.61■□□□□ 0.41
SGMS1-209ENST00000609445 TTPALQ9BTX7 342 aa17.61■□□□□ 0.41
SGMS1-209ENST00000609445 PLEKHA4Q9H4M7 779 aa17.61■□□□□ 0.41
SGMS1-209ENST00000609445 KCNK12Q9HB15 430 aa17.61■□□□□ 0.41
SGMS1-209ENST00000609445 DPP7Q9UHL4 492 aa17.61■□□□□ 0.41
SGMS1-209ENST00000609445 DNM3Q9UQ16 869 aa17.61■□□□□ 0.41
SGMS1-209ENST00000609445 ADAM12O43184 909 aa17.6■□□□□ 0.41
SGMS1-209ENST00000609445 PRPHP41219 470 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms