RNA–Protein interactions for RNA: ENST00000604922.1

SH3D19-213, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-213ENST00000604922 PRAMEF14Q5SWL7 426 aa6.71□□□□□ -1.34
SH3D19-213ENST00000604922 EFCAB12Q6NXP0 572 aa6.71□□□□□ -1.34
SH3D19-213ENST00000604922 OR7D4Q8NG98 312 aa6.71□□□□□ -1.34
SH3D19-213ENST00000604922 CLIP3Q96DZ5 547 aa6.71□□□□□ -1.34
SH3D19-213ENST00000604922 DCLRE1CQ96SD1 692 aaKnown RBP6.71□□□□□ -1.34
SH3D19-213ENST00000604922 FAM126AQ9BYI3 521 aaPredicted RBP6.71□□□□□ -1.34
SH3D19-213ENST00000604922 CPEB1Q9BZB8 566 aaKnown RBP6.71□□□□□ -1.34
SH3D19-213ENST00000604922 POGKQ9P215 609 aa6.71□□□□□ -1.34
SH3D19-213ENST00000604922 ATP8A1Q9Y2Q0 1164 aa6.71□□□□□ -1.34
SH3D19-213ENST00000604922 CHD1O14646 1710 aa6.7□□□□□ -1.34
SH3D19-213ENST00000604922 POU3F3P20264 500 aaPredicted RBP6.7□□□□□ -1.34
SH3D19-213ENST00000604922 FLT3LGP49771 235 aa6.7□□□□□ -1.34
SH3D19-213ENST00000604922 ERVK-21P61565 698 aa6.7□□□□□ -1.34
SH3D19-213ENST00000604922 MALLQ13021 153 aa6.7□□□□□ -1.34
SH3D19-213ENST00000604922 KLF1Q13351 362 aaPredicted RBP6.7□□□□□ -1.34
SH3D19-213ENST00000604922 FAM47AQ5JRC9 791 aa6.7□□□□□ -1.34
SH3D19-213ENST00000604922 MBNL2Q5VZF2 373 aaKnown RBP6.7□□□□□ -1.34
SH3D19-213ENST00000604922 DRICH1Q6PGQ1 229 aaPredicted RBP6.7□□□□□ -1.34
SH3D19-213ENST00000604922 GPRIN1Q7Z2K8 1008 aa6.7□□□□□ -1.34
SH3D19-213ENST00000604922 NECAB2Q7Z6G3 386 aa6.7□□□□□ -1.34
SH3D19-213ENST00000604922 ZFP28Q8NHY6 868 aa6.7□□□□□ -1.34
SH3D19-213ENST00000604922 TFAP2CQ92754 450 aa6.7□□□□□ -1.34
SH3D19-213ENST00000604922 MENTQ9BUN1 341 aa6.7□□□□□ -1.34
SH3D19-213ENST00000604922 TRIM8Q9BZR9 551 aa6.7□□□□□ -1.34
SH3D19-213ENST00000604922 FANCD2Q9BXW9 1451 aa6.69□□□□□ -1.34
SH3D19-213ENST00000604922 OSMP13725 252 aa6.69□□□□□ -1.34
SH3D19-213ENST00000604922 GSPT1P15170 499 aaKnown RBP6.69□□□□□ -1.34
SH3D19-213ENST00000604922 MTNR1BP49286 362 aa6.69□□□□□ -1.34
SH3D19-213ENST00000604922 NOMO1Q15155 1222 aa6.69□□□□□ -1.34
SH3D19-213ENST00000604922 BMT2Q1RMZ1 405 aa6.69□□□□□ -1.34
SH3D19-213ENST00000604922 AMER2Q8N7J2 671 aa6.69□□□□□ -1.34
SH3D19-213ENST00000604922 CNTD1Q8N815 330 aa6.69□□□□□ -1.34
SH3D19-213ENST00000604922 KCNH6Q9H252 994 aa6.69□□□□□ -1.34
SH3D19-213ENST00000604922 SCOCQ9UIL1 159 aa6.69□□□□□ -1.34
SH3D19-213ENST00000604922 ING1Q9UK53 422 aaPredicted RBP6.69□□□□□ -1.34
SH3D19-213ENST00000604922 GPR45Q9Y5Y3 372 aa6.69□□□□□ -1.34
SH3D19-213ENST00000604922 URB2Q14146 1524 aaKnown RBP6.69□□□□□ -1.34
SH3D19-213ENST00000604922 ZNF608Q9ULD9 1512 aaPredicted RBP6.69□□□□□ -1.34
SH3D19-213ENST00000604922 GRXCR1A8MXD5 290 aa6.68□□□□□ -1.34
SH3D19-213ENST00000604922 DIRC3C9JPN6 131 aa6.68□□□□□ -1.34
SH3D19-213ENST00000604922 ENDOD1O94919 500 aa6.68□□□□□ -1.34
SH3D19-213ENST00000604922 SNRPA1P09661 255 aaKnown RBP6.68□□□□□ -1.34
SH3D19-213ENST00000604922 RBP3P10745 1247 aa6.68□□□□□ -1.34
SH3D19-213ENST00000604922 IL2RBP14784 551 aa6.68□□□□□ -1.34
SH3D19-213ENST00000604922 APOBEC3AP31941 199 aaPredicted RBP6.68□□□□□ -1.34
SH3D19-213ENST00000604922 CLUL1Q15846 466 aa6.68□□□□□ -1.34
SH3D19-213ENST00000604922 MFSD14BQ5SR56 506 aa6.68□□□□□ -1.34
SH3D19-213ENST00000604922 ANKS6Q68DC2 871 aa6.68□□□□□ -1.34
SH3D19-213ENST00000604922 ZNF572Q7Z3I7 529 aaPredicted RBP6.68□□□□□ -1.34
SH3D19-213ENST00000604922 PQLC1Q8N2U9 271 aa6.68□□□□□ -1.34
SH3D19-213ENST00000604922 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.68□□□□□ -1.34
SH3D19-213ENST00000604922 OR10H5Q8NGA6 315 aa6.68□□□□□ -1.34
SH3D19-213ENST00000604922 CEP95Q96GE4 821 aa6.68□□□□□ -1.34
SH3D19-213ENST00000604922 SLC46A2Q9BY10 475 aa6.68□□□□□ -1.34
SH3D19-213ENST00000604922 MOCS1Q9NZB8 636 aa6.68□□□□□ -1.34
SH3D19-213ENST00000604922 GPRC5BQ9NZH0 403 aa6.68□□□□□ -1.34
SH3D19-213ENST00000604922 TRPM5Q9NZQ8 1165 aa6.68□□□□□ -1.34
SH3D19-213ENST00000604922 FZD1Q9UP38 647 aa6.68□□□□□ -1.34
SH3D19-213ENST00000604922 PCDHGA2Q9Y5H1 932 aa6.68□□□□□ -1.34
SH3D19-213ENST00000604922 PJA2O43164 708 aa6.67□□□□□ -1.34
SH3D19-213ENST00000604922 ADCY6O43306 1168 aa6.67□□□□□ -1.34
SH3D19-213ENST00000604922 MCAMP43121 646 aa6.67□□□□□ -1.34
SH3D19-213ENST00000604922 CLRN1P58418 232 aa6.67□□□□□ -1.34
SH3D19-213ENST00000604922 NHLH2Q02577 135 aa6.67□□□□□ -1.34
SH3D19-213ENST00000604922 SP140Q13342 867 aa6.67□□□□□ -1.34
SH3D19-213ENST00000604922 Q6ZVL8 140 aa6.67□□□□□ -1.34
SH3D19-213ENST00000604922 TRMT2AQ8IZ69 625 aaKnown RBP6.67□□□□□ -1.34
SH3D19-213ENST00000604922 REPS2Q8NFH8 660 aa6.67□□□□□ -1.34
SH3D19-213ENST00000604922 SSH1Q8WYL5 1049 aa6.67□□□□□ -1.34
SH3D19-213ENST00000604922 LARP4BQ92615 738 aaKnown RBP6.67□□□□□ -1.34
SH3D19-213ENST00000604922 LENG9Q96B70 501 aa6.67□□□□□ -1.34
SH3D19-213ENST00000604922 PRRX2Q99811 253 aa6.67□□□□□ -1.34
SH3D19-213ENST00000604922 SENP6Q9GZR1 1112 aaPredicted RBP6.67□□□□□ -1.34
SH3D19-213ENST00000604922 LANCL2Q9NS86 450 aa6.67□□□□□ -1.34
SH3D19-213ENST00000604922 FAM171A2A8MVW0 826 aa6.66□□□□□ -1.34
SH3D19-213ENST00000604922 ITGB1P05556 798 aa6.66□□□□□ -1.34
SH3D19-213ENST00000604922 SPATA31D3P0C874 917 aa6.66□□□□□ -1.34
SH3D19-213ENST00000604922 LAG3P18627 525 aa6.66□□□□□ -1.34
SH3D19-213ENST00000604922 AGXTP21549 392 aa6.66□□□□□ -1.34
SH3D19-213ENST00000604922 SREBF1P36956 1147 aa6.66□□□□□ -1.34
SH3D19-213ENST00000604922 DPTQ07507 201 aa6.66□□□□□ -1.34
SH3D19-213ENST00000604922 TIGD2Q4W5G0 525 aa6.66□□□□□ -1.34
SH3D19-213ENST00000604922 RRP12Q5JTH9 1297 aaKnown RBP6.66□□□□□ -1.34
SH3D19-213ENST00000604922 LY6G5CQ5SRR4 150 aa6.66□□□□□ -1.34
SH3D19-213ENST00000604922 ATXN7L2Q5T6C5 722 aaPredicted RBP6.66□□□□□ -1.34
SH3D19-213ENST00000604922 PGM2L1Q6PCE3 622 aa6.66□□□□□ -1.34
SH3D19-213ENST00000604922 SPATA31D4Q6ZUB0 917 aa6.66□□□□□ -1.34
SH3D19-213ENST00000604922 GDF7Q7Z4P5 450 aa6.66□□□□□ -1.34
SH3D19-213ENST00000604922 DMRT3Q9NQL9 472 aa6.66□□□□□ -1.34
SH3D19-213ENST00000604922 TMEM140Q9NV12 185 aa6.66□□□□□ -1.34
SH3D19-213ENST00000604922 MKS1Q9NXB0 559 aa6.66□□□□□ -1.34
SH3D19-213ENST00000604922 DNM3Q9UQ16 869 aa6.66□□□□□ -1.34
SH3D19-213ENST00000604922 WDR33Q9C0J8 1336 aaKnown RBP6.66□□□□□ -1.34
SH3D19-213ENST00000604922 TRIM75PA6NK02 468 aa6.65□□□□□ -1.34
SH3D19-213ENST00000604922 CXorf49A8MYA2 514 aaPredicted RBP6.65□□□□□ -1.34
SH3D19-213ENST00000604922 LEFTY2O00292 366 aa6.65□□□□□ -1.34
SH3D19-213ENST00000604922 RNASET2O00584 256 aaKnown RBP6.65□□□□□ -1.34
SH3D19-213ENST00000604922 ABHD16AO95870 558 aa6.65□□□□□ -1.34
SH3D19-213ENST00000604922 CDK11BP21127 795 aaKnown RBP6.65□□□□□ -1.34
SH3D19-213ENST00000604922 GUCY2FP51841 1108 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms