RNA–Protein interactions for RNA: ENST00000603043.1

CDCA3-211, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 1,995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-211ENST00000603043 STYXL1Q9Y6J8 313 aa17.01■□□□□ 0.31
CDCA3-211ENST00000603043 TMEM265A0A087WTH1 108 aa17■□□□□ 0.31
CDCA3-211ENST00000603043 ARL5CA6NH57 179 aa17■□□□□ 0.31
CDCA3-211ENST00000603043 NOMO2Q5JPE7 1267 aa17■□□□□ 0.31
CDCA3-211ENST00000603043 URGCPQ8TCY9 931 aa17■□□□□ 0.31
CDCA3-211ENST00000603043 GPT2Q8TD30 523 aa17■□□□□ 0.31
CDCA3-211ENST00000603043 POMGNT1Q8WZA1 660 aa17■□□□□ 0.31
CDCA3-211ENST00000603043 GBP3Q9H0R5 595 aa17■□□□□ 0.31
CDCA3-211ENST00000603043 KLK14Q9P0G3 267 aa17■□□□□ 0.31
CDCA3-211ENST00000603043 MRPL42Q9Y6G3 142 aaKnown RBP17■□□□□ 0.31
CDCA3-211ENST00000603043 ADSSP30520 456 aa17■□□□□ 0.31
CDCA3-211ENST00000603043 AFF1P51825 1210 aaKnown RBP17■□□□□ 0.31
CDCA3-211ENST00000603043 SEZ6Q53EL9 994 aa17■□□□□ 0.31
CDCA3-211ENST00000603043 ZNF697Q5TEC3 545 aa17■□□□□ 0.31
CDCA3-211ENST00000603043 TMEM192Q8IY95 271 aa17■□□□□ 0.31
CDCA3-211ENST00000603043 ZNF576Q9H609 170 aa17■□□□□ 0.31
CDCA3-211ENST00000603043 OGTO15294 1046 aa16.99■□□□□ 0.31
CDCA3-211ENST00000603043 MCM4P33991 863 aa16.99■□□□□ 0.31
CDCA3-211ENST00000603043 YARSP54577 528 aaKnown RBP16.99■□□□□ 0.31
CDCA3-211ENST00000603043 KNOP1Q1ED39 458 aaKnown RBP16.99■□□□□ 0.31
CDCA3-211ENST00000603043 GPR153Q6NV75 609 aa16.99■□□□□ 0.31
CDCA3-211ENST00000603043 LRRC55Q6ZSA7 311 aa16.99■□□□□ 0.31
CDCA3-211ENST00000603043 CLP1Q92989 425 aaKnown RBP16.99■□□□□ 0.31
CDCA3-211ENST00000603043 ACAP3Q96P50 834 aa16.99■□□□□ 0.31
CDCA3-211ENST00000603043 RPS6KC1Q96S38 1066 aa16.99■□□□□ 0.31
CDCA3-211ENST00000603043 CLSTN2Q9H4D0 955 aa16.99■□□□□ 0.31
CDCA3-211ENST00000603043 TOPORSQ9NS56 1045 aaPredicted RBP16.99■□□□□ 0.31
CDCA3-211ENST00000603043 TYW1Q9NV66 732 aaKnown RBP16.99■□□□□ 0.31
CDCA3-211ENST00000603043 TBC1D13Q9NVG8 400 aa16.99■□□□□ 0.31
CDCA3-211ENST00000603043 KANSL3Q9P2N6 904 aa16.99■□□□□ 0.31
CDCA3-211ENST00000603043 HCSTQ9UBK5 93 aa16.99■□□□□ 0.31
CDCA3-211ENST00000603043 AGO2Q9UKV8 859 aaKnown RBP16.99■□□□□ 0.31
CDCA3-211ENST00000603043 PDCD11Q14690 1871 aaKnown RBP16.99■□□□□ 0.31
CDCA3-211ENST00000603043 INPPL1O15357 1258 aa16.98■□□□□ 0.31
CDCA3-211ENST00000603043 FAM189A1O60320 539 aa16.98■□□□□ 0.31
CDCA3-211ENST00000603043 KIF20AO95235 890 aa16.98■□□□□ 0.31
CDCA3-211ENST00000603043 POMCP01189 267 aa16.98■□□□□ 0.31
CDCA3-211ENST00000603043 LINC00271P0C7V0 271 aa16.98■□□□□ 0.31
CDCA3-211ENST00000603043 GARTP22102 1010 aa16.98■□□□□ 0.31
CDCA3-211ENST00000603043 RNASELQ05823 741 aaKnown RBP16.98■□□□□ 0.31
CDCA3-211ENST00000603043 KYAT1Q16773 422 aa16.98■□□□□ 0.31
CDCA3-211ENST00000603043 SPOUT1Q5T280 376 aaKnown RBP16.98■□□□□ 0.31
CDCA3-211ENST00000603043 ZNF658Q5TYW1 1059 aaPredicted RBP16.98■□□□□ 0.31
CDCA3-211ENST00000603043 ARMCX5Q6P1M9 558 aa16.98■□□□□ 0.31
CDCA3-211ENST00000603043 SPRED2Q7Z698 418 aa16.98■□□□□ 0.31
CDCA3-211ENST00000603043 TGS1Q96RS0 853 aaKnown RBP16.98■□□□□ 0.31
CDCA3-211ENST00000603043 NUP62CLQ9H1M0 184 aa16.98■□□□□ 0.31
CDCA3-211ENST00000603043 TTYH1Q9H313 450 aaPredicted RBP16.98■□□□□ 0.31
CDCA3-211ENST00000603043 MTUS1Q9ULD2 1270 aa16.98■□□□□ 0.31
CDCA3-211ENST00000603043 ANK1P16157 1881 aa16.98■□□□□ 0.31
CDCA3-211ENST00000603043 RRP9O43818 475 aaKnown RBP16.98■□□□□ 0.31
CDCA3-211ENST00000603043 MBD3O95983 291 aa16.98■□□□□ 0.31
CDCA3-211ENST00000603043 SCNN1GP51170 649 aa16.98■□□□□ 0.31
CDCA3-211ENST00000603043 ZBTB41Q5SVQ8 909 aa16.98■□□□□ 0.31
CDCA3-211ENST00000603043 HS2ST1Q7LGA3 356 aa16.98■□□□□ 0.31
CDCA3-211ENST00000603043 GSTCDQ8NEC7 633 aa16.98■□□□□ 0.31
CDCA3-211ENST00000603043 CBWD1Q9BRT8 395 aa16.98■□□□□ 0.31
CDCA3-211ENST00000603043 C17orf80Q9BSJ5 609 aa16.98■□□□□ 0.31
CDCA3-211ENST00000603043 CWH43Q9H720 699 aa16.98■□□□□ 0.31
CDCA3-211ENST00000603043 CERS4Q9HA82 394 aa16.98■□□□□ 0.31
CDCA3-211ENST00000603043 MAPK8IP1Q9UQF2 711 aa16.98■□□□□ 0.31
CDCA3-211ENST00000603043 RWDD3Q9Y3V2 267 aa16.98■□□□□ 0.31
CDCA3-211ENST00000603043 TGFB1I1O43294 461 aa16.97■□□□□ 0.31
CDCA3-211ENST00000603043 CLTAP09496 248 aa16.97■□□□□ 0.31
CDCA3-211ENST00000603043 TNFSF9P41273 254 aa16.97■□□□□ 0.31
CDCA3-211ENST00000603043 ERVK-21P61565 698 aa16.97■□□□□ 0.31
CDCA3-211ENST00000603043 SMYD4Q8IYR2 804 aaPredicted RBP16.97■□□□□ 0.31
CDCA3-211ENST00000603043 GTPBP4Q9BZE4 634 aaKnown RBP16.97■□□□□ 0.31
CDCA3-211ENST00000603043 AGPAT3Q9NRZ7 376 aa16.97■□□□□ 0.31
CDCA3-211ENST00000603043 MAN1B1Q9UKM7 699 aa16.97■□□□□ 0.31
CDCA3-211ENST00000603043 CXCL8P10145 99 aa16.97■□□□□ 0.31
CDCA3-211ENST00000603043 CTNNB1P35222 781 aa16.97■□□□□ 0.31
CDCA3-211ENST00000603043 ACOT2P49753 483 aa16.97■□□□□ 0.31
CDCA3-211ENST00000603043 SNRPFP62306 86 aaKnown RBP16.97■□□□□ 0.31
CDCA3-211ENST00000603043 GUF1Q8N442 669 aaKnown RBP16.97■□□□□ 0.31
CDCA3-211ENST00000603043 ARNTL2Q8WYA1 636 aa16.97■□□□□ 0.31
CDCA3-211ENST00000603043 SAAL1Q96ER3 474 aa16.97■□□□□ 0.31
CDCA3-211ENST00000603043 SNX27Q96L92 541 aa16.97■□□□□ 0.31
CDCA3-211ENST00000603043 SAMD11Q96NU1 681 aa16.97■□□□□ 0.31
CDCA3-211ENST00000603043 CXCL16Q9H2A7 254 aa16.97■□□□□ 0.31
CDCA3-211ENST00000603043 PCIF1Q9H4Z3 704 aa16.97■□□□□ 0.31
CDCA3-211ENST00000603043 MIOSQ9NXC5 875 aa16.97■□□□□ 0.31
CDCA3-211ENST00000603043 KIAA1468Q9P260 1216 aa16.97■□□□□ 0.31
CDCA3-211ENST00000603043 CPSF3Q9UKF6 684 aaKnown RBP16.97■□□□□ 0.31
CDCA3-211ENST00000603043 BIN1O00499 593 aa16.96■□□□□ 0.31
CDCA3-211ENST00000603043 ZC3H11AO75152 810 aaKnown RBP eCLIP16.96■□□□□ 0.31
CDCA3-211ENST00000603043 LAG3P18627 525 aa16.96■□□□□ 0.31
CDCA3-211ENST00000603043 GRIK3Q13003 919 aa16.96■□□□□ 0.31
CDCA3-211ENST00000603043 EPC2Q52LR7 807 aa16.96■□□□□ 0.31
CDCA3-211ENST00000603043 ISM2Q6H9L7 571 aa16.96■□□□□ 0.31
CDCA3-211ENST00000603043 GOLGA5Q8TBA6 731 aa16.96■□□□□ 0.31
CDCA3-211ENST00000603043 FAM193BQ96PV7 902 aaPredicted RBP16.96■□□□□ 0.31
CDCA3-211ENST00000603043 KCTD10Q9H3F6 313 aa16.96■□□□□ 0.31
CDCA3-211ENST00000603043 SEMA6BQ9H3T3 888 aa16.96■□□□□ 0.31
CDCA3-211ENST00000603043 RPF1Q9H9Y2 349 aaKnown RBP16.96■□□□□ 0.31
CDCA3-211ENST00000603043 AAASQ9NRG9 546 aa16.96■□□□□ 0.31
CDCA3-211ENST00000603043 CGNQ9P2M7 1197 aaKnown RBP16.96■□□□□ 0.31
CDCA3-211ENST00000603043 PLAGL2Q9UPG8 496 aa16.96■□□□□ 0.31
CDCA3-211ENST00000603043 COL4A4P53420 1690 aaPredicted RBP16.96■□□□□ 0.31
CDCA3-211ENST00000603043 PTGESO14684 152 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms