RNA–Protein interactions for RNA: ENST00000598607.1

GTF2F1-206, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 4

Gene GTF2F1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-206ENST00000598607 LDHAP00338 332 aaKnown RBP16.48■□□□□ 0.23
GTF2F1-206ENST00000598607 PTMSP20962 102 aa16.48■□□□□ 0.23
GTF2F1-206ENST00000598607 MCM4P33991 863 aa16.48■□□□□ 0.23
GTF2F1-206ENST00000598607 MLH1P40692 756 aa16.48■□□□□ 0.23
GTF2F1-206ENST00000598607 TAP1Q03518 808 aa16.48■□□□□ 0.23
GTF2F1-206ENST00000598607 KNOP1Q1ED39 458 aaKnown RBP16.48■□□□□ 0.23
GTF2F1-206ENST00000598607 SPOUT1Q5T280 376 aaKnown RBP16.48■□□□□ 0.23
GTF2F1-206ENST00000598607 ZNF658Q5TYW1 1059 aaPredicted RBP16.48■□□□□ 0.23
GTF2F1-206ENST00000598607 ARMCX5Q6P1M9 558 aa16.48■□□□□ 0.23
GTF2F1-206ENST00000598607 NELFCDQ8IXH7 590 aa16.48■□□□□ 0.23
GTF2F1-206ENST00000598607 CEP120Q8N960 986 aa16.48■□□□□ 0.23
GTF2F1-206ENST00000598607 GOLGA5Q8TBA6 731 aa16.48■□□□□ 0.23
GTF2F1-206ENST00000598607 TGS1Q96RS0 853 aaKnown RBP16.48■□□□□ 0.23
GTF2F1-206ENST00000598607 GAD1Q99259 594 aa16.48■□□□□ 0.23
GTF2F1-206ENST00000598607 NUP62CLQ9H1M0 184 aa16.48■□□□□ 0.23
GTF2F1-206ENST00000598607 CLSTN2Q9H4D0 955 aa16.48■□□□□ 0.23
GTF2F1-206ENST00000598607 AAASQ9NRG9 546 aa16.48■□□□□ 0.23
GTF2F1-206ENST00000598607 AGO2Q9UKV8 859 aaKnown RBP16.48■□□□□ 0.23
GTF2F1-206ENST00000598607 COL4A4P53420 1690 aaPredicted RBP16.48■□□□□ 0.23
GTF2F1-206ENST00000598607 ARL5CA6NH57 179 aa16.47■□□□□ 0.23
GTF2F1-206ENST00000598607 CLTAP09496 248 aa16.47■□□□□ 0.23
GTF2F1-206ENST00000598607 FXR1P51114 621 aaKnown RBP eCLIP16.47■□□□□ 0.23
GTF2F1-206ENST00000598607 OSTNP61366 133 aa16.47■□□□□ 0.23
GTF2F1-206ENST00000598607 RNASELQ05823 741 aaKnown RBP16.47■□□□□ 0.23
GTF2F1-206ENST00000598607 HSP90AA2PQ14568 343 aaPredicted RBP16.47■□□□□ 0.23
GTF2F1-206ENST00000598607 GUF1Q8N442 669 aaKnown RBP16.47■□□□□ 0.23
GTF2F1-206ENST00000598607 CLP1Q92989 425 aaKnown RBP16.47■□□□□ 0.23
GTF2F1-206ENST00000598607 FAM193BQ96PV7 902 aaPredicted RBP16.47■□□□□ 0.23
GTF2F1-206ENST00000598607 HAPLN2Q9GZV7 340 aa16.47■□□□□ 0.23
GTF2F1-206ENST00000598607 ZNF576Q9H609 170 aa16.47■□□□□ 0.23
GTF2F1-206ENST00000598607 TBC1D13Q9NVG8 400 aa16.47■□□□□ 0.23
GTF2F1-206ENST00000598607 MRPL42Q9Y6G3 142 aaKnown RBP16.47■□□□□ 0.23
GTF2F1-206ENST00000598607 TISP43B9A030 160 aa16.46■□□□□ 0.23
GTF2F1-206ENST00000598607 LAG3P18627 525 aa16.46■□□□□ 0.23
GTF2F1-206ENST00000598607 HOXD13P35453 343 aa16.46■□□□□ 0.23
GTF2F1-206ENST00000598607 PPP1R2P41236 205 aa16.46■□□□□ 0.23
GTF2F1-206ENST00000598607 ERVK-21P61565 698 aa16.46■□□□□ 0.23
GTF2F1-206ENST00000598607 POU5F1Q01860 360 aaKnown RBP16.46■□□□□ 0.23
GTF2F1-206ENST00000598607 GRIK3Q13003 919 aa16.46■□□□□ 0.23
GTF2F1-206ENST00000598607 CAMK4Q16566 473 aa16.46■□□□□ 0.23
GTF2F1-206ENST00000598607 COBLL1Q53SF7 1204 aa16.46■□□□□ 0.23
GTF2F1-206ENST00000598607 TRIML1Q8N9V2 468 aa16.46■□□□□ 0.23
GTF2F1-206ENST00000598607 GPT2Q8TD30 523 aa16.46■□□□□ 0.23
GTF2F1-206ENST00000598607 ERCC4Q92889 916 aaPredicted RBP16.46■□□□□ 0.23
GTF2F1-206ENST00000598607 PLEKHA5Q9HAU0 1116 aa16.46■□□□□ 0.23
GTF2F1-206ENST00000598607 TYW1Q9NV66 732 aaKnown RBP16.46■□□□□ 0.23
GTF2F1-206ENST00000598607 KLK14Q9P0G3 267 aa16.46■□□□□ 0.23
GTF2F1-206ENST00000598607 LAMA2P24043 3122 aaKnown RBP16.45■□□□□ 0.22
GTF2F1-206ENST00000598607 PDXKO00764 312 aa16.45■□□□□ 0.22
GTF2F1-206ENST00000598607 POMCP01189 267 aa16.45■□□□□ 0.22
GTF2F1-206ENST00000598607 RB1P06400 928 aa16.45■□□□□ 0.22
GTF2F1-206ENST00000598607 THP07101 528 aa16.45■□□□□ 0.22
GTF2F1-206ENST00000598607 ADSSP30520 456 aa16.45■□□□□ 0.22
GTF2F1-206ENST00000598607 SCNN1GP51170 649 aa16.45■□□□□ 0.22
GTF2F1-206ENST00000598607 STIM1Q13586 685 aa16.45■□□□□ 0.22
GTF2F1-206ENST00000598607 CD302Q8IX05 232 aa16.45■□□□□ 0.22
GTF2F1-206ENST00000598607 TMEM192Q8IY95 271 aa16.45■□□□□ 0.22
GTF2F1-206ENST00000598607 SNX27Q96L92 541 aa16.45■□□□□ 0.22
GTF2F1-206ENST00000598607 ZFP42Q96MM3 310 aa16.45■□□□□ 0.22
GTF2F1-206ENST00000598607 PLVAPQ9BX97 442 aa16.45■□□□□ 0.22
GTF2F1-206ENST00000598607 IKZF4Q9H2S9 585 aa16.45■□□□□ 0.22
GTF2F1-206ENST00000598607 CWH43Q9H720 699 aa16.45■□□□□ 0.22
GTF2F1-206ENST00000598607 RPF1Q9H9Y2 349 aaKnown RBP16.45■□□□□ 0.22
GTF2F1-206ENST00000598607 AGPAT3Q9NRZ7 376 aa16.45■□□□□ 0.22
GTF2F1-206ENST00000598607 KIAA1468Q9P260 1216 aa16.45■□□□□ 0.22
GTF2F1-206ENST00000598607 CPSF3Q9UKF6 684 aaKnown RBP16.45■□□□□ 0.22
GTF2F1-206ENST00000598607 MAN1B1Q9UKM7 699 aa16.45■□□□□ 0.22
GTF2F1-206ENST00000598607 PCDHB12Q9Y5F1 795 aa16.45■□□□□ 0.22
GTF2F1-206ENST00000598607 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.45■□□□□ 0.22
GTF2F1-206ENST00000598607 TGFB1I1O43294 461 aa16.44■□□□□ 0.22
GTF2F1-206ENST00000598607 CALUO43852 315 aaPredicted RBP16.44■□□□□ 0.22
GTF2F1-206ENST00000598607 FAM189A1O60320 539 aa16.44■□□□□ 0.22
GTF2F1-206ENST00000598607 ARHGEF15O94989 841 aa16.44■□□□□ 0.22
GTF2F1-206ENST00000598607 CTNNB1P35222 781 aa16.44■□□□□ 0.22
GTF2F1-206ENST00000598607 BMPR1AP36894 532 aa16.44■□□□□ 0.22
GTF2F1-206ENST00000598607 PPP2R3AQ06190 1150 aa16.44■□□□□ 0.22
GTF2F1-206ENST00000598607 SEZ6Q53EL9 994 aa16.44■□□□□ 0.22
GTF2F1-206ENST00000598607 XKR4Q5GH76 650 aa16.44■□□□□ 0.22
GTF2F1-206ENST00000598607 LRRC55Q6ZSA7 311 aa16.44■□□□□ 0.22
GTF2F1-206ENST00000598607 C12orf56Q8IXR9 622 aa16.44■□□□□ 0.22
GTF2F1-206ENST00000598607 GPD1LQ8N335 351 aa16.44■□□□□ 0.22
GTF2F1-206ENST00000598607 ZNF558Q96NG5 402 aa16.44■□□□□ 0.22
GTF2F1-206ENST00000598607 TSPAN18Q96SJ8 248 aa16.44■□□□□ 0.22
GTF2F1-206ENST00000598607 CBWD1Q9BRT8 395 aa16.44■□□□□ 0.22
GTF2F1-206ENST00000598607 TMEM175Q9BSA9 504 aa16.44■□□□□ 0.22
GTF2F1-206ENST00000598607 C17orf80Q9BSJ5 609 aa16.44■□□□□ 0.22
GTF2F1-206ENST00000598607 KCTD10Q9H3F6 313 aa16.44■□□□□ 0.22
GTF2F1-206ENST00000598607 NRDE2Q9H7Z3 1164 aa16.44■□□□□ 0.22
GTF2F1-206ENST00000598607 KIAA1586Q9HCI6 787 aa16.44■□□□□ 0.22
GTF2F1-206ENST00000598607 CNTN3Q9P232 1028 aa16.44■□□□□ 0.22
GTF2F1-206ENST00000598607 ATG2AQ2TAZ0 1938 aa16.43■□□□□ 0.22
GTF2F1-206ENST00000598607 LAMA3Q16787 3333 aa16.43■□□□□ 0.22
GTF2F1-206ENST00000598607 C5orf67F2Z3F1 127 aa16.43■□□□□ 0.22
GTF2F1-206ENST00000598607 CLIC2O15247 247 aa16.43■□□□□ 0.22
GTF2F1-206ENST00000598607 EXTL3O43909 919 aa16.43■□□□□ 0.22
GTF2F1-206ENST00000598607 ZC3H11AO75152 810 aaKnown RBP eCLIP16.43■□□□□ 0.22
GTF2F1-206ENST00000598607 LINC00271P0C7V0 271 aa16.43■□□□□ 0.22
GTF2F1-206ENST00000598607 CXCL8P10145 99 aa16.43■□□□□ 0.22
GTF2F1-206ENST00000598607 PPM1AP35813 382 aa16.43■□□□□ 0.22
GTF2F1-206ENST00000598607 TNFSF9P41273 254 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms