RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 KLK14Q9P0G3 267 aa21.1■□□□□ 0.97
PNKP-207ENST00000596014 MRPL42Q9Y6G3 142 aaKnown RBP21.1■□□□□ 0.97
PNKP-207ENST00000596014 NLRC5Q86WI3 1866 aa21.1■□□□□ 0.97
PNKP-207ENST00000596014 ZMYM2Q9UBW7 1377 aa21.1■□□□□ 0.97
PNKP-207ENST00000596014 RECQL4O94761 1208 aa21.09■□□□□ 0.97
PNKP-207ENST00000596014 MLH1P40692 756 aa21.09■□□□□ 0.97
PNKP-207ENST00000596014 SEZ6Q53EL9 994 aa21.09■□□□□ 0.97
PNKP-207ENST00000596014 GPR153Q6NV75 609 aa21.09■□□□□ 0.97
PNKP-207ENST00000596014 SPRED2Q7Z698 418 aa21.09■□□□□ 0.97
PNKP-207ENST00000596014 POMGNT1Q8WZA1 660 aa21.09■□□□□ 0.97
PNKP-207ENST00000596014 GBP3Q9H0R5 595 aa21.09■□□□□ 0.97
PNKP-207ENST00000596014 TDRD15B5MCY1 1934 aaKnown RBP21.09■□□□□ 0.97
PNKP-207ENST00000596014 INPPL1O15357 1258 aa21.09■□□□□ 0.97
PNKP-207ENST00000596014 FAM189A1O60320 539 aa21.09■□□□□ 0.97
PNKP-207ENST00000596014 KNOP1Q1ED39 458 aaKnown RBP21.09■□□□□ 0.97
PNKP-207ENST00000596014 LRRC43Q8N309 656 aa21.09■□□□□ 0.97
PNKP-207ENST00000596014 GSTCDQ8NEC7 633 aa21.09■□□□□ 0.97
PNKP-207ENST00000596014 CLP1Q92989 425 aaKnown RBP21.09■□□□□ 0.97
PNKP-207ENST00000596014 ACAP3Q96P50 834 aa21.09■□□□□ 0.97
PNKP-207ENST00000596014 MRPL9Q9BYD2 267 aaKnown RBP21.09■□□□□ 0.97
PNKP-207ENST00000596014 CLSTN2Q9H4D0 955 aa21.09■□□□□ 0.97
PNKP-207ENST00000596014 ZNF576Q9H609 170 aa21.09■□□□□ 0.97
PNKP-207ENST00000596014 TBC1D13Q9NVG8 400 aa21.09■□□□□ 0.97
PNKP-207ENST00000596014 MIOSQ9NXC5 875 aa21.09■□□□□ 0.97
PNKP-207ENST00000596014 HCSTQ9UBK5 93 aa21.09■□□□□ 0.97
PNKP-207ENST00000596014 KIAA1671Q9BY89 1806 aa21.08■□□□□ 0.97
PNKP-207ENST00000596014 TMEM265A0A087WTH1 108 aa21.08■□□□□ 0.96
PNKP-207ENST00000596014 OGTO15294 1046 aa21.08■□□□□ 0.96
PNKP-207ENST00000596014 TGFB1I1O43294 461 aa21.08■□□□□ 0.96
PNKP-207ENST00000596014 LINC00271P0C7V0 271 aa21.08■□□□□ 0.96
PNKP-207ENST00000596014 KYAT1Q16773 422 aa21.08■□□□□ 0.96
PNKP-207ENST00000596014 ZNF658Q5TYW1 1059 aaPredicted RBP21.08■□□□□ 0.96
PNKP-207ENST00000596014 URGCPQ8TCY9 931 aa21.08■□□□□ 0.96
PNKP-207ENST00000596014 CXCL16Q9H2A7 254 aa21.08■□□□□ 0.96
PNKP-207ENST00000596014 TTYH1Q9H313 450 aaPredicted RBP21.08■□□□□ 0.96
PNKP-207ENST00000596014 CWH43Q9H720 699 aa21.08■□□□□ 0.96
PNKP-207ENST00000596014 KANSL3Q9P2N6 904 aa21.08■□□□□ 0.96
PNKP-207ENST00000596014 AGO2Q9UKV8 859 aaKnown RBP21.08■□□□□ 0.96
PNKP-207ENST00000596014 MAPK8IP1Q9UQF2 711 aa21.08■□□□□ 0.96
PNKP-207ENST00000596014 RALGAPA2Q2PPJ7 1873 aa21.07■□□□□ 0.96
PNKP-207ENST00000596014 POMCP01189 267 aa21.07■□□□□ 0.96
PNKP-207ENST00000596014 CLTAP09496 248 aa21.07■□□□□ 0.96
PNKP-207ENST00000596014 GARTP22102 1010 aa21.07■□□□□ 0.96
PNKP-207ENST00000596014 YARSP54577 528 aaKnown RBP21.07■□□□□ 0.96
PNKP-207ENST00000596014 ERVK-21P61565 698 aa21.07■□□□□ 0.96
PNKP-207ENST00000596014 ZBTB41Q5SVQ8 909 aa21.07■□□□□ 0.96
PNKP-207ENST00000596014 TGS1Q96RS0 853 aaKnown RBP21.07■□□□□ 0.96
PNKP-207ENST00000596014 CBWD1Q9BRT8 395 aa21.07■□□□□ 0.96
PNKP-207ENST00000596014 MAN1B1Q9UKM7 699 aa21.07■□□□□ 0.96
PNKP-207ENST00000596014 TRANK1O15050 2925 aa21.07■□□□□ 0.96
PNKP-207ENST00000596014 TNFSF9P41273 254 aa21.06■□□□□ 0.96
PNKP-207ENST00000596014 SCNN1GP51170 649 aa21.06■□□□□ 0.96
PNKP-207ENST00000596014 SNRPFP62306 86 aaKnown RBP21.06■□□□□ 0.96
PNKP-207ENST00000596014 RNASELQ05823 741 aaKnown RBP21.06■□□□□ 0.96
PNKP-207ENST00000596014 ALKAL1Q6UXT8 129 aa21.06■□□□□ 0.96
PNKP-207ENST00000596014 SMYD4Q8IYR2 804 aaPredicted RBP21.06■□□□□ 0.96
PNKP-207ENST00000596014 GUF1Q8N442 669 aaKnown RBP21.06■□□□□ 0.96
PNKP-207ENST00000596014 C17orf80Q9BSJ5 609 aa21.06■□□□□ 0.96
PNKP-207ENST00000596014 CERS4Q9HA82 394 aa21.06■□□□□ 0.96
PNKP-207ENST00000596014 TOPORSQ9NS56 1045 aaPredicted RBP21.06■□□□□ 0.96
PNKP-207ENST00000596014 KIAA1468Q9P260 1216 aa21.06■□□□□ 0.96
PNKP-207ENST00000596014 MEFVO15553 781 aaPredicted RBP21.05■□□□□ 0.96
PNKP-207ENST00000596014 KIF20AO95235 890 aa21.05■□□□□ 0.96
PNKP-207ENST00000596014 MBD3O95983 291 aa21.05■□□□□ 0.96
PNKP-207ENST00000596014 ACOT2P49753 483 aa21.05■□□□□ 0.96
PNKP-207ENST00000596014 SLC10A6Q3KNW5 377 aa21.05■□□□□ 0.96
PNKP-207ENST00000596014 SPOUT1Q5T280 376 aaKnown RBP21.05■□□□□ 0.96
PNKP-207ENST00000596014 ZNF697Q5TEC3 545 aa21.05■□□□□ 0.96
PNKP-207ENST00000596014 ISM2Q6H9L7 571 aa21.05■□□□□ 0.96
PNKP-207ENST00000596014 ARMCX5Q6P1M9 558 aa21.05■□□□□ 0.96
PNKP-207ENST00000596014 HS2ST1Q7LGA3 356 aa21.05■□□□□ 0.96
PNKP-207ENST00000596014 RPS6KC1Q96S38 1066 aa21.05■□□□□ 0.96
PNKP-207ENST00000596014 GTPBP4Q9BZE4 634 aaKnown RBP21.05■□□□□ 0.96
PNKP-207ENST00000596014 NUP62CLQ9H1M0 184 aa21.05■□□□□ 0.96
PNKP-207ENST00000596014 KCTD10Q9H3F6 313 aa21.05■□□□□ 0.96
PNKP-207ENST00000596014 SEMA6BQ9H3T3 888 aa21.05■□□□□ 0.96
PNKP-207ENST00000596014 PCIF1Q9H4Z3 704 aa21.05■□□□□ 0.96
PNKP-207ENST00000596014 AGPAT3Q9NRZ7 376 aa21.05■□□□□ 0.96
PNKP-207ENST00000596014 CPSF3Q9UKF6 684 aaKnown RBP21.05■□□□□ 0.96
PNKP-207ENST00000596014 MTUS1Q9ULD2 1270 aa21.05■□□□□ 0.96
PNKP-207ENST00000596014 PTGESO14684 152 aa21.05■□□□□ 0.96
PNKP-207ENST00000596014 DDHD2O94830 711 aa21.05■□□□□ 0.96
PNKP-207ENST00000596014 XKR4Q5GH76 650 aa21.05■□□□□ 0.96
PNKP-207ENST00000596014 ZNF280BQ86YH2 543 aa21.05■□□□□ 0.96
PNKP-207ENST00000596014 SAMD11Q96NU1 681 aa21.05■□□□□ 0.96
PNKP-207ENST00000596014 NRDE2Q9H7Z3 1164 aa21.05■□□□□ 0.96
PNKP-207ENST00000596014 CGNQ9P2M7 1197 aaKnown RBP21.05■□□□□ 0.96
PNKP-207ENST00000596014 PLAGL2Q9UPG8 496 aa21.05■□□□□ 0.96
PNKP-207ENST00000596014 RWDD3Q9Y3V2 267 aa21.05■□□□□ 0.96
PNKP-207ENST00000596014 PDXKO00764 312 aa21.04■□□□□ 0.96
PNKP-207ENST00000596014 CXCL8P10145 99 aa21.04■□□□□ 0.96
PNKP-207ENST00000596014 BMPR1AP36894 532 aa21.04■□□□□ 0.96
PNKP-207ENST00000596014 ENOX2Q16206 610 aaKnown RBP21.04■□□□□ 0.96
PNKP-207ENST00000596014 EPC2Q52LR7 807 aa21.04■□□□□ 0.96
PNKP-207ENST00000596014 CRELD2Q6UXH1 353 aaPredicted RBP21.04■□□□□ 0.96
PNKP-207ENST00000596014 ZSWIM2Q8NEG5 633 aa21.04■□□□□ 0.96
PNKP-207ENST00000596014 ARNTL2Q8WYA1 636 aa21.04■□□□□ 0.96
PNKP-207ENST00000596014 SAAL1Q96ER3 474 aa21.04■□□□□ 0.96
PNKP-207ENST00000596014 SNX27Q96L92 541 aa21.04■□□□□ 0.96
PNKP-207ENST00000596014 FSD2A1L4K1 749 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms