RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 UBN1Q9NPG3 1134 aa10.87□□□□□ -0.67
TPM4-216ENST00000592822 TYW1Q9NV66 732 aaKnown RBP10.87□□□□□ -0.67
TPM4-216ENST00000592822 MIOSQ9NXC5 875 aa10.87□□□□□ -0.67
TPM4-216ENST00000592822 KLK14Q9P0G3 267 aa10.87□□□□□ -0.67
TPM4-216ENST00000592822 PARP2Q9UGN5 583 aa10.87□□□□□ -0.67
TPM4-216ENST00000592822 INPP5FQ9Y2H2 1132 aa10.87□□□□□ -0.67
TPM4-216ENST00000592822 GDAQ9Y2T3 454 aa10.87□□□□□ -0.67
TPM4-216ENST00000592822 GIT1Q9Y2X7 761 aa10.87□□□□□ -0.67
TPM4-216ENST00000592822 TDRD15B5MCY1 1934 aaKnown RBP10.87□□□□□ -0.67
TPM4-216ENST00000592822 TMEM265A0A087WTH1 108 aa10.86□□□□□ -0.67
TPM4-216ENST00000592822 OGTO15294 1046 aa10.86□□□□□ -0.67
TPM4-216ENST00000592822 TGFB1I1O43294 461 aa10.86□□□□□ -0.67
TPM4-216ENST00000592822 B4GALT3O60512 393 aa10.86□□□□□ -0.67
TPM4-216ENST00000592822 POMCP01189 267 aa10.86□□□□□ -0.67
TPM4-216ENST00000592822 MCM4P33991 863 aa10.86□□□□□ -0.67
TPM4-216ENST00000592822 ERVK-21P61565 698 aa10.86□□□□□ -0.67
TPM4-216ENST00000592822 GPR153Q6NV75 609 aa10.86□□□□□ -0.67
TPM4-216ENST00000592822 LRRC43Q8N309 656 aa10.86□□□□□ -0.67
TPM4-216ENST00000592822 RSPH1Q8WYR4 309 aa10.86□□□□□ -0.67
TPM4-216ENST00000592822 CLP1Q92989 425 aaKnown RBP10.86□□□□□ -0.67
TPM4-216ENST00000592822 ACAP3Q96P50 834 aa10.86□□□□□ -0.67
TPM4-216ENST00000592822 TGS1Q96RS0 853 aaKnown RBP10.86□□□□□ -0.67
TPM4-216ENST00000592822 C17orf80Q9BSJ5 609 aa10.86□□□□□ -0.67
TPM4-216ENST00000592822 MSTO1Q9BUK6 570 aa10.86□□□□□ -0.67
TPM4-216ENST00000592822 CCDC94Q9BW85 323 aaPredicted RBP10.86□□□□□ -0.67
TPM4-216ENST00000592822 CLSTN2Q9H4D0 955 aa10.86□□□□□ -0.67
TPM4-216ENST00000592822 CWH43Q9H720 699 aa10.86□□□□□ -0.67
TPM4-216ENST00000592822 TBC1D13Q9NVG8 400 aa10.86□□□□□ -0.67
TPM4-216ENST00000592822 RMND1Q9NWS8 449 aa10.86□□□□□ -0.67
TPM4-216ENST00000592822 MAN1B1Q9UKM7 699 aa10.86□□□□□ -0.67
TPM4-216ENST00000592822 AGO2Q9UKV8 859 aaKnown RBP10.86□□□□□ -0.67
TPM4-216ENST00000592822 ANK1P16157 1881 aa10.85□□□□□ -0.67
TPM4-216ENST00000592822 PDCD11Q14690 1871 aaKnown RBP10.85□□□□□ -0.67
TPM4-216ENST00000592822 MYO9BQ13459 2157 aa10.85□□□□□ -0.67
TPM4-216ENST00000592822 PTGESO14684 152 aa10.85□□□□□ -0.67
TPM4-216ENST00000592822 DDHD2O94830 711 aa10.85□□□□□ -0.67
TPM4-216ENST00000592822 CLTAP09496 248 aa10.85□□□□□ -0.67
TPM4-216ENST00000592822 TNFSF9P41273 254 aa10.85□□□□□ -0.67
TPM4-216ENST00000592822 SCNN1GP51170 649 aa10.85□□□□□ -0.67
TPM4-216ENST00000592822 ENOX2Q16206 610 aaKnown RBP10.85□□□□□ -0.67
TPM4-216ENST00000592822 KNOP1Q1ED39 458 aaKnown RBP10.85□□□□□ -0.67
TPM4-216ENST00000592822 SLC10A6Q3KNW5 377 aa10.85□□□□□ -0.67
TPM4-216ENST00000592822 XKR4Q5GH76 650 aa10.85□□□□□ -0.67
TPM4-216ENST00000592822 ZNF658Q5TYW1 1059 aaPredicted RBP10.85□□□□□ -0.67
TPM4-216ENST00000592822 CRELD2Q6UXH1 353 aaPredicted RBP10.85□□□□□ -0.67
TPM4-216ENST00000592822 ALKAL1Q6UXT8 129 aa10.85□□□□□ -0.67
TPM4-216ENST00000592822 ZNF280BQ86YH2 543 aa10.85□□□□□ -0.67
TPM4-216ENST00000592822 SMYD4Q8IYR2 804 aaPredicted RBP10.85□□□□□ -0.67
TPM4-216ENST00000592822 ZSWIM2Q8NEG5 633 aa10.85□□□□□ -0.67
TPM4-216ENST00000592822 URGCPQ8TCY9 931 aa10.85□□□□□ -0.67
TPM4-216ENST00000592822 POMGNT1Q8WZA1 660 aa10.85□□□□□ -0.67
TPM4-216ENST00000592822 CBWD1Q9BRT8 395 aa10.85□□□□□ -0.67
TPM4-216ENST00000592822 MRPL9Q9BYD2 267 aaKnown RBP10.85□□□□□ -0.67
TPM4-216ENST00000592822 GBP3Q9H0R5 595 aa10.85□□□□□ -0.67
TPM4-216ENST00000592822 KCTD10Q9H3F6 313 aa10.85□□□□□ -0.67
TPM4-216ENST00000592822 SEMA6BQ9H3T3 888 aa10.85□□□□□ -0.67
TPM4-216ENST00000592822 NRDE2Q9H7Z3 1164 aa10.85□□□□□ -0.67
TPM4-216ENST00000592822 CERS4Q9HA82 394 aa10.85□□□□□ -0.67
TPM4-216ENST00000592822 AGPAT3Q9NRZ7 376 aa10.85□□□□□ -0.67
TPM4-216ENST00000592822 KANSL3Q9P2N6 904 aa10.85□□□□□ -0.67
TPM4-216ENST00000592822 MTUS1Q9ULD2 1270 aa10.85□□□□□ -0.67
TPM4-216ENST00000592822 PLAGL2Q9UPG8 496 aa10.85□□□□□ -0.67
TPM4-216ENST00000592822 MAPK8IP1Q9UQF2 711 aa10.85□□□□□ -0.67
TPM4-216ENST00000592822 CDH23Q9H251 3354 aa10.84□□□□□ -0.67
TPM4-216ENST00000592822 EPOPA6NHQ4 379 aa10.84□□□□□ -0.67
TPM4-216ENST00000592822 CXCL8P10145 99 aa10.84□□□□□ -0.67
TPM4-216ENST00000592822 BMP6P22004 513 aa10.84□□□□□ -0.67
TPM4-216ENST00000592822 GARTP22102 1010 aa10.84□□□□□ -0.67
TPM4-216ENST00000592822 BMPR1AP36894 532 aa10.84□□□□□ -0.67
TPM4-216ENST00000592822 ACOT2P49753 483 aa10.84□□□□□ -0.67
TPM4-216ENST00000592822 YARSP54577 528 aaKnown RBP10.84□□□□□ -0.67
TPM4-216ENST00000592822 SNRPFP62306 86 aaKnown RBP10.84□□□□□ -0.67
TPM4-216ENST00000592822 RNASELQ05823 741 aaKnown RBP10.84□□□□□ -0.67
TPM4-216ENST00000592822 MORC3Q14149 939 aa10.84□□□□□ -0.67
TPM4-216ENST00000592822 GRIN2CQ14957 1233 aa10.84□□□□□ -0.67
TPM4-216ENST00000592822 NAB2Q15742 525 aa10.84□□□□□ -0.67
TPM4-216ENST00000592822 KYAT1Q16773 422 aa10.84□□□□□ -0.67
TPM4-216ENST00000592822 EPC2Q52LR7 807 aa10.84□□□□□ -0.67
TPM4-216ENST00000592822 ZNF697Q5TEC3 545 aa10.84□□□□□ -0.67
TPM4-216ENST00000592822 ISM2Q6H9L7 571 aa10.84□□□□□ -0.67
TPM4-216ENST00000592822 Q7L0L9 218 aa10.84□□□□□ -0.67
TPM4-216ENST00000592822 HS2ST1Q7LGA3 356 aa10.84□□□□□ -0.67
TPM4-216ENST00000592822 GUF1Q8N442 669 aaKnown RBP10.84□□□□□ -0.67
TPM4-216ENST00000592822 COLGALT1Q8NBJ5 622 aa10.84□□□□□ -0.67
TPM4-216ENST00000592822 ARNTL2Q8WYA1 636 aa10.84□□□□□ -0.67
TPM4-216ENST00000592822 SNX27Q96L92 541 aa10.84□□□□□ -0.67
TPM4-216ENST00000592822 FAM161BQ96MY7 647 aa10.84□□□□□ -0.67
TPM4-216ENST00000592822 SAMD11Q96NU1 681 aa10.84□□□□□ -0.67
TPM4-216ENST00000592822 PCIF1Q9H4Z3 704 aa10.84□□□□□ -0.67
TPM4-216ENST00000592822 TOPORSQ9NS56 1045 aaPredicted RBP10.84□□□□□ -0.67
TPM4-216ENST00000592822 KIAA1468Q9P260 1216 aa10.84□□□□□ -0.67
TPM4-216ENST00000592822 DNAJB4Q9UDY4 337 aa10.84□□□□□ -0.67
TPM4-216ENST00000592822 CPSF3Q9UKF6 684 aaKnown RBP10.84□□□□□ -0.67
TPM4-216ENST00000592822 PLXNA4Q9HCM2 1894 aa10.83□□□□□ -0.68
TPM4-216ENST00000592822 COL4A4P53420 1690 aaPredicted RBP10.83□□□□□ -0.68
TPM4-216ENST00000592822 SMIM28A0A1B0GU29 152 aa10.83□□□□□ -0.68
TPM4-216ENST00000592822 TTC26A0AVF1 554 aa10.83□□□□□ -0.68
TPM4-216ENST00000592822 GOLGA8IPA6NC78 632 aa10.83□□□□□ -0.68
TPM4-216ENST00000592822 GOLGA8JA6NMD2 632 aa10.83□□□□□ -0.68
TPM4-216ENST00000592822 C5orf67F2Z3F1 127 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms